RNA–Protein interactions for RNA: ENST00000540424.5

GABARAPL1-208, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 2

Gene GABARAPL1, Length 2,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-208ENST00000540424 FAM71F1Q96KD3 344 aaPredicted RBP13.16□□□□□ -0.3
GABARAPL1-208ENST00000540424 HIPK2Q9H2X6 1198 aa13.16□□□□□ -0.3
GABARAPL1-208ENST00000540424 P4HTMQ9NXG6 502 aa13.16□□□□□ -0.3
GABARAPL1-208ENST00000540424 AK3Q9UIJ7 227 aa13.16□□□□□ -0.3
GABARAPL1-208ENST00000540424 RALGAPA1Q6GYQ0 2036 aa13.16□□□□□ -0.3
GABARAPL1-208ENST00000540424 DNPH1O43598 174 aa13.16□□□□□ -0.3
GABARAPL1-208ENST00000540424 CCL4P13236 92 aa13.16□□□□□ -0.3
GABARAPL1-208ENST00000540424 HIST1H1DP16402 221 aaKnown RBP13.16□□□□□ -0.3
GABARAPL1-208ENST00000540424 ALDH3B1P43353 468 aa13.16□□□□□ -0.3
GABARAPL1-208ENST00000540424 OR3A2P47893 321 aa13.16□□□□□ -0.3
GABARAPL1-208ENST00000540424 MLF1P58340 268 aa13.16□□□□□ -0.3
GABARAPL1-208ENST00000540424 TAS2R46P59540 309 aa13.16□□□□□ -0.3
GABARAPL1-208ENST00000540424 FOXL2NBQ6ZUU3 175 aa13.16□□□□□ -0.3
GABARAPL1-208ENST00000540424 SGCZQ96LD1 299 aa13.16□□□□□ -0.3
GABARAPL1-208ENST00000540424 GPER1Q99527 375 aa13.16□□□□□ -0.3
GABARAPL1-208ENST00000540424 SH2D2AQ9NP31 389 aa13.16□□□□□ -0.3
GABARAPL1-208ENST00000540424 MAML2Q8IZL2 1156 aaPredicted RBP13.15□□□□□ -0.3
GABARAPL1-208ENST00000540424 OR5AS1Q8N127 324 aa13.15□□□□□ -0.3
GABARAPL1-208ENST00000540424 TMEM170AQ8WVE7 144 aa13.15□□□□□ -0.3
GABARAPL1-208ENST00000540424 HAS2Q92819 552 aa13.15□□□□□ -0.3
GABARAPL1-208ENST00000540424 ZNF160Q9HCG1 818 aa13.15□□□□□ -0.3
GABARAPL1-208ENST00000540424 NAGKQ9UJ70 344 aa13.15□□□□□ -0.3
GABARAPL1-208ENST00000540424 GDF9O60383 454 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 SCGB1D1O95968 90 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 KNG1P01042 644 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 HBE1P02100 147 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 SELEP16581 610 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 MDKP21741 143 aaPredicted RBP13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 ZXDAP98168 799 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 ZNF266Q14584 549 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 P2RY6Q15077 328 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 TRIM61Q5EBN2 209 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 RIPPLY2Q5TAB7 128 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 ASCC3Q8N3C0 2202 aaKnown RBP13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 C20orf144Q9BQM9 153 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 MIEN1Q9BRT3 115 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 TMEM59Q9BXS4 323 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 LPAR5Q9H1C0 372 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 DNAJC4Q9NNZ3 241 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 RCL1Q9Y2P8 373 aaKnown RBP13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 SDK1Q7Z5N4 2213 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 A0A0U1RQV5 110 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 B4E171 279 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 DHHO43323 396 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 HPRT1P00492 218 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 RPL23AP62750 156 aaKnown RBP13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 OR5I1Q13606 314 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 TMEM241Q24JQ0 296 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 PLAC9Q5JTB6 97 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 FAM90A2PQ658T7 463 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 ZFP62Q8NB50 900 aaPredicted RBP13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 RNASE8Q8TDE3 154 aaKnown RBP13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 C10orf35Q96D05 121 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 NICN1Q9BSH3 213 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 ABHD14AQ9BUJ0 271 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 SF3B5Q9BWJ5 86 aaKnown RBP13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 OR2J1Q9GZK6 312 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 NCOR1O75376 2440 aa13.14□□□□□ -0.31
GABARAPL1-208ENST00000540424 A0A0A6YYD4 124 aa13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 LOC102723971A0A1B0GUV8 181 aa13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 ZIC3O60481 467 aa13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 MPIG6BO95866 241 aa13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 ATP6V0CP27449 155 aa13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 ELLP55199 621 aaPredicted RBP13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 COL5A1-AS1Q5SY13 56 aa13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 SSX7Q7RTT5 188 aa13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 SVIPQ8NHG7 77 aa13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 KCNE4Q8WWG9 221 aa13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 GSX1Q9H4S2 264 aaPredicted RBP13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 PROK2Q9HC23 129 aa13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 MSL2Q9HCI7 577 aa13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 EHFQ9NZC4 300 aa13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 CRYM-AS1A6NIL9 109 aa13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 A8MXE2 369 aa13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 LCATP04180 440 aa13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 IDH3GP51553 393 aaPredicted RBP13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 PRDX4Q13162 271 aa13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 ZNF880Q6PDB4 577 aa13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 SLC23A3Q6PIS1 610 aa13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 ZNF66Q6ZN08 573 aa13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 NUFIP2Q7Z417 695 aaKnown RBP13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 PP6455Q8WZ26 134 aa13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 SPTSSAQ969W0 71 aa13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 SDF2L1Q9HCN8 221 aa13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 ZNF319Q9P2F9 582 aa13.13□□□□□ -0.31
GABARAPL1-208ENST00000540424 PATE3B3GLJ2 98 aa13.12□□□□□ -0.31
GABARAPL1-208ENST00000540424 IGLV3-1P01715 115 aa13.12□□□□□ -0.31
GABARAPL1-208ENST00000540424 P04436 131 aa13.12□□□□□ -0.31
GABARAPL1-208ENST00000540424 CTSDP07339 412 aaPredicted RBP13.12□□□□□ -0.31
GABARAPL1-208ENST00000540424 OR3A4PP47883 348 aa13.12□□□□□ -0.31
GABARAPL1-208ENST00000540424 VAMP2P63027 116 aa13.12□□□□□ -0.31
GABARAPL1-208ENST00000540424 HIST1H3AP68431 136 aa13.12□□□□□ -0.31
GABARAPL1-208ENST00000540424 ARL6IP1Q15041 203 aa13.12□□□□□ -0.31
GABARAPL1-208ENST00000540424 LEMD1Q68G75 181 aa13.12□□□□□ -0.31
GABARAPL1-208ENST00000540424 TMEM123Q8N131 208 aa13.12□□□□□ -0.31
GABARAPL1-208ENST00000540424 GBGT1Q8N5D6 347 aa13.12□□□□□ -0.31
GABARAPL1-208ENST00000540424 RBM24Q9BX46 236 aaKnown RBP13.12□□□□□ -0.31
GABARAPL1-208ENST00000540424 ULBP2Q9BZM5 246 aa13.12□□□□□ -0.31
GABARAPL1-208ENST00000540424 SDCBPO00560 298 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms