RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 DYRK2Q92630 601 aa14.82□□□□□ -0.04
SNRPA1-203ENST00000540017 FOXRED1Q96CU9 486 aaPredicted RBP14.82□□□□□ -0.04
SNRPA1-203ENST00000540017 SSX3Q99909 188 aa14.82□□□□□ -0.04
SNRPA1-203ENST00000540017 C1RLQ9NZP8 487 aa14.82□□□□□ -0.04
SNRPA1-203ENST00000540017 RCC2Q9P258 522 aaKnown RBP14.82□□□□□ -0.04
SNRPA1-203ENST00000540017 AK6Q9Y3D8 172 aaKnown RBP14.82□□□□□ -0.04
SNRPA1-203ENST00000540017 LRRC42Q9Y546 428 aa14.82□□□□□ -0.04
SNRPA1-203ENST00000540017 KBTBD11-OT1A0A1B0GTJ5 212 aa14.81□□□□□ -0.04
SNRPA1-203ENST00000540017 H3BUX3 64 aa14.81□□□□□ -0.04
SNRPA1-203ENST00000540017 SLC22A1O15245 554 aa14.81□□□□□ -0.04
SNRPA1-203ENST00000540017 JUNBP17275 347 aaPredicted RBP14.81□□□□□ -0.04
SNRPA1-203ENST00000540017 CALRP27797 417 aaKnown RBP14.81□□□□□ -0.04
SNRPA1-203ENST00000540017 CFPP27918 469 aa14.81□□□□□ -0.04
SNRPA1-203ENST00000540017 FOXL1Q12952 345 aa14.81□□□□□ -0.04
SNRPA1-203ENST00000540017 SLC35E4Q6ICL7 350 aa14.81□□□□□ -0.04
SNRPA1-203ENST00000540017 CD200R1LQ6Q8B3 271 aa14.81□□□□□ -0.04
SNRPA1-203ENST00000540017 ABHD12Q8N2K0 398 aa14.81□□□□□ -0.04
SNRPA1-203ENST00000540017 PIFOQ8TCI5 191 aa14.81□□□□□ -0.04
SNRPA1-203ENST00000540017 MRGPRDQ8TDS7 321 aa14.81□□□□□ -0.04
SNRPA1-203ENST00000540017 CLEC7AQ9BXN2 247 aa14.81□□□□□ -0.04
SNRPA1-203ENST00000540017 SLITRK2Q9H156 845 aa14.81□□□□□ -0.04
SNRPA1-203ENST00000540017 ZNF286AQ9HBT8 521 aa14.81□□□□□ -0.04
SNRPA1-203ENST00000540017 NDUFB11Q9NX14 153 aa14.81□□□□□ -0.04
SNRPA1-203ENST00000540017 CALYQ9NYX4 217 aa14.81□□□□□ -0.04
SNRPA1-203ENST00000540017 GHRLQ9UBU3 117 aa14.81□□□□□ -0.04
SNRPA1-203ENST00000540017 VPREB3Q9UKI3 123 aa14.81□□□□□ -0.04
SNRPA1-203ENST00000540017 TBL2Q9Y4P3 447 aaKnown RBP14.81□□□□□ -0.04
SNRPA1-203ENST00000540017 SHISA3A0PJX4 238 aa14.8□□□□□ -0.04
SNRPA1-203ENST00000540017 ARL6IP5O75915 188 aa14.8□□□□□ -0.04
SNRPA1-203ENST00000540017 MPIG6BO95866 241 aa14.8□□□□□ -0.04
SNRPA1-203ENST00000540017 MDKP21741 143 aaPredicted RBP14.8□□□□□ -0.04
SNRPA1-203ENST00000540017 HTR2CP28335 458 aa14.8□□□□□ -0.04
SNRPA1-203ENST00000540017 QRFPP83859 136 aa14.8□□□□□ -0.04
SNRPA1-203ENST00000540017 LRRC75BQ2VPJ9 315 aa14.8□□□□□ -0.04
SNRPA1-203ENST00000540017 PLA1AQ53H76 456 aa14.8□□□□□ -0.04
SNRPA1-203ENST00000540017 RAB12Q6IQ22 244 aa14.8□□□□□ -0.04
SNRPA1-203ENST00000540017 ZNF565Q8N9K5 539 aa14.8□□□□□ -0.04
SNRPA1-203ENST00000540017 OR4P4Q8NGL7 312 aa14.8□□□□□ -0.04
SNRPA1-203ENST00000540017 RFESDQ8TAC1 157 aa14.8□□□□□ -0.04
SNRPA1-203ENST00000540017 KIRREL1Q96J84 757 aa14.8□□□□□ -0.04
SNRPA1-203ENST00000540017 LINC00574Q9H8X3 128 aa14.8□□□□□ -0.04
SNRPA1-203ENST00000540017 FAM90A10PA6NDY2 464 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 FAM90A18PA6NE21 464 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 FAM90A16PA6NEW6 464 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 FAM90A20PA6NIJ5 464 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 FAM90A7PA6NKC0 464 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 FAM90A22PA8MWA6 464 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 FAM90A12PA8MX19 464 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 FAM90A5PA8MXJ8 464 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 FAM90A23PA8MXZ1 464 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 MT-ND4P03905 459 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 FAM90A15PP0C7V4 464 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 FAM90A13PP0C7W8 464 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 FAM90A14PP0C7W9 464 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 FAM90A24PP0C7X0 464 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 UBBP0CG47 229 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 SSTR5P35346 364 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 RAB13P51153 203 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 UNC119Q13432 240 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 P2RY14Q15391 338 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 SSX2Q16385 188 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 LY6EQ16553 131 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 OR52W1Q6IF63 320 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 ZNF773Q6PK81 442 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 ZNF497Q6ZNH5 498 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 OR5R1Q8NH85 324 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 NEK7Q8TDX7 302 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 MALSU1Q96EH3 234 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 CST11Q9H112 138 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 PEX16Q9Y5Y5 336 aa14.79□□□□□ -0.04
SNRPA1-203ENST00000540017 A0A087X0M5 115 aa14.78□□□□□ -0.04
SNRPA1-203ENST00000540017 A0A1B0GX30 115 aa14.78□□□□□ -0.04
SNRPA1-203ENST00000540017 TMEM30CPA0ZSE6 113 aa14.78□□□□□ -0.04
SNRPA1-203ENST00000540017 BTBD17A6NE02 478 aa14.78□□□□□ -0.04
SNRPA1-203ENST00000540017 TMEM14DPA8MWL7 114 aa14.78□□□□□ -0.04
SNRPA1-203ENST00000540017 NPIPB11E5RHQ5 1161 aa14.78□□□□□ -0.04
SNRPA1-203ENST00000540017 SLC17A2O00624 439 aa14.78□□□□□ -0.04
SNRPA1-203ENST00000540017 IL1AP01583 271 aa14.78□□□□□ -0.04
SNRPA1-203ENST00000540017 IGLV1-47P01700 117 aa14.78□□□□□ -0.04
SNRPA1-203ENST00000540017 CRYBA1P05813 215 aa14.78□□□□□ -0.04
SNRPA1-203ENST00000540017 NFYBP25208 207 aa14.78□□□□□ -0.04
SNRPA1-203ENST00000540017 PSMB9P28065 219 aa14.78□□□□□ -0.04
SNRPA1-203ENST00000540017 CD34P28906 385 aa14.78□□□□□ -0.04
SNRPA1-203ENST00000540017 RAG2P55895 527 aa14.78□□□□□ -0.04
SNRPA1-203ENST00000540017 RPS27AP62979 156 aaKnown RBP14.78□□□□□ -0.04
SNRPA1-203ENST00000540017 AANATQ16613 207 aa14.78□□□□□ -0.04
SNRPA1-203ENST00000540017 C3orf56Q8N813 242 aa14.78□□□□□ -0.04
SNRPA1-203ENST00000540017 OR6M1Q8NGM8 313 aa14.78□□□□□ -0.04
SNRPA1-203ENST00000540017 CCDC107Q8WV48 283 aa14.78□□□□□ -0.04
SNRPA1-203ENST00000540017 SPACA1Q9HBV2 294 aa14.78□□□□□ -0.04
SNRPA1-203ENST00000540017 IDI2-AS1Q9NZ38 188 aa14.78□□□□□ -0.04
SNRPA1-203ENST00000540017 HILPDAQ9Y5L2 63 aa14.78□□□□□ -0.04
SNRPA1-203ENST00000540017 TRDV1A0A1B0GX56 115 aa14.77□□□□□ -0.05
SNRPA1-203ENST00000540017 VGLL3A8MV65 326 aa14.77□□□□□ -0.05
SNRPA1-203ENST00000540017 MCRIP1C9JLW8 97 aa14.77□□□□□ -0.05
SNRPA1-203ENST00000540017 C15orf65H3BRN8 121 aa14.77□□□□□ -0.05
SNRPA1-203ENST00000540017 CCRL2O00421 344 aa14.77□□□□□ -0.05
SNRPA1-203ENST00000540017 NDUFA7O95182 113 aa14.77□□□□□ -0.05
SNRPA1-203ENST00000540017 IGHV3-7P01780 117 aa14.77□□□□□ -0.05
SNRPA1-203ENST00000540017 FUT3P21217 361 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms