RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 SLC25A22Q9H936 323 aa8.71□□□□□ -1.02
TRAF1-202ENST00000540010 LIN7CQ9NUP9 197 aaKnown RBP8.71□□□□□ -1.02
TRAF1-202ENST00000540010 BDP1A6H8Y1 2624 aa8.71□□□□□ -1.02
TRAF1-202ENST00000540010 TRBV5-5A0A0J9YX44 114 aa8.71□□□□□ -1.02
TRAF1-202ENST00000540010 IGHMP01871 453 aa8.71□□□□□ -1.02
TRAF1-202ENST00000540010 RAB5AP20339 215 aa8.71□□□□□ -1.02
TRAF1-202ENST00000540010 CHRNA7P36544 502 aa8.71□□□□□ -1.02
TRAF1-202ENST00000540010 DHODHQ02127 395 aa8.71□□□□□ -1.02
TRAF1-202ENST00000540010 OR8B8Q15620 311 aa8.71□□□□□ -1.02
TRAF1-202ENST00000540010 PIGYQ3MUY2 71 aa8.71□□□□□ -1.02
TRAF1-202ENST00000540010 OR2V1Q8NHB1 315 aa8.71□□□□□ -1.02
TRAF1-202ENST00000540010 BSCL2Q96G97 398 aaPredicted RBP8.71□□□□□ -1.02
TRAF1-202ENST00000540010 DDA1Q9BW61 102 aa8.71□□□□□ -1.02
TRAF1-202ENST00000540010 NPDC1Q9NQX5 325 aaPredicted RBP8.71□□□□□ -1.02
TRAF1-202ENST00000540010 FOXJ2Q9P0K8 574 aa8.71□□□□□ -1.02
TRAF1-202ENST00000540010 B3GAT1Q9P2W7 334 aa8.71□□□□□ -1.02
TRAF1-202ENST00000540010 CTSDP07339 412 aaPredicted RBP8.7□□□□□ -1.02
TRAF1-202ENST00000540010 HOXD4P09016 255 aaPredicted RBP8.7□□□□□ -1.02
TRAF1-202ENST00000540010 FGF7P21781 194 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 CA6P23280 308 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 RPS11P62280 158 aaKnown RBP eCLIP8.7□□□□□ -1.02
TRAF1-202ENST00000540010 EIF3IQ13347 325 aaKnown RBP8.7□□□□□ -1.02
TRAF1-202ENST00000540010 RIMS4Q9H426 269 aaPredicted RBP8.7□□□□□ -1.02
TRAF1-202ENST00000540010 ZDHHC11Q9H8X9 412 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 PLA2G3Q9NZ20 509 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 PCNX3Q9H6A9 2034 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 IGLV3-32A0A0A0MS00 114 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 A0A1W2PNV4 684 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 CD1AP06126 327 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 PGA3P0DJD8 388 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 DYNLT3P51808 116 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 ZNF345Q14585 488 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 ZNF880Q6PDB4 577 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 UNQ9370/PRO34162Q6UXP9 181 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 LDLRAD3Q86YD5 345 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 RBMXL3Q8N7X1 1067 aaKnown RBP8.7□□□□□ -1.02
TRAF1-202ENST00000540010 OR6X1Q8NH79 312 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 SNX22Q96L94 193 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 KCNK17Q96T54 332 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 GPHA2Q96T91 129 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 MAP1LC3B2A6NCE7 125 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 BTBD17A6NE02 478 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 DEFB108AA8MXU0 73 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 C9orf172C9J069 976 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 CDX4O14627 284 aaPredicted RBP8.7□□□□□ -1.02
TRAF1-202ENST00000540010 OR2A4O95047 310 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 YIF1AO95070 293 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 ZBTB25P24278 435 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 GPR12P47775 334 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 ZNF154Q13106 437 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 PRDX4Q13162 271 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 HABP2Q14520 560 aaPredicted RBP8.7□□□□□ -1.02
TRAF1-202ENST00000540010 RAB35Q15286 201 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 TRIP6Q15654 476 aaKnown RBP8.7□□□□□ -1.02
TRAF1-202ENST00000540010 FAM58AQ8N1B3 248 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 OR2A7Q96R45 310 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 MAP1LC3BQ9GZQ8 125 aa8.7□□□□□ -1.02
TRAF1-202ENST00000540010 ACACAQ13085 2346 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 NOTCH3Q9UM47 2321 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 TNFSF4P23510 183 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 IL13RA2Q14627 380 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 SLC10A1Q14973 349 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 SLC25A53Q5H9E4 307 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 PHYHD1Q5SRE7 291 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 FADS6Q8N9I5 356 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 OR10V1Q8NGI7 309 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 H1FXQ92522 213 aaKnown RBP8.69□□□□□ -1.02
TRAF1-202ENST00000540010 ZNF385AQ96PM9 386 aaKnown RBP8.69□□□□□ -1.02
TRAF1-202ENST00000540010 RAB9BQ9NP90 201 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 DIDO1Q9BTC0 2240 aaKnown RBP8.69□□□□□ -1.02
TRAF1-202ENST00000540010 LRP5LA4QPB2 252 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 NKX2-6A6NCS4 301 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 NDUFB7P17568 137 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 CEACAM6P40199 344 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 ERVS71-1P61550 626 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 RUNX1Q01196 453 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 ZNF260Q3ZCT1 412 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 LIAT1Q6ZQX7 453 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 TBC1D26Q86UD7 250 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 OR11L1Q8NGX0 322 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 NTNG2Q96CW9 530 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 BTF3L4Q96K17 158 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 OR10C1Q96KK4 312 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 LPAR5Q9H1C0 372 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 MYO15AQ9UKN7 3530 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 PPYP01298 95 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 HEXAP06865 529 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 HLA-DRB3P79483 266 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 OR10D3Q8NH80 312 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 ZNF251Q9BRH9 671 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 MSL2Q9HCI7 577 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 CCL28Q9NRJ3 127 aa8.69□□□□□ -1.02
TRAF1-202ENST00000540010 IGKV1D-43A0A0B4J1Z2 117 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 RAMP1O60894 148 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 EIF3GO75821 320 aaKnown RBP eCLIP8.68□□□□□ -1.02
TRAF1-202ENST00000540010 BTCP35070 178 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 RPL29P47914 159 aaKnown RBP8.68□□□□□ -1.02
TRAF1-202ENST00000540010 PRR27Q6MZM9 219 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 GAPTQ8N292 157 aa8.68□□□□□ -1.02
TRAF1-202ENST00000540010 APOBEC3DQ96AK3 386 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms