RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 KCNAB3O43448 404 aa17.19■□□□□ 0.34
PACSIN3-211ENST00000539589 GGNBP1Q5YKI7 109 aa17.19■□□□□ 0.34
PACSIN3-211ENST00000539589 SCCPDHQ8NBX0 429 aa17.19■□□□□ 0.34
PACSIN3-211ENST00000539589 KLF14Q8TD94 323 aaPredicted RBP17.19■□□□□ 0.34
PACSIN3-211ENST00000539589 RRNAD1Q96FB5 475 aaKnown RBP17.19■□□□□ 0.34
PACSIN3-211ENST00000539589 DMRTA2Q96SC8 542 aa17.19■□□□□ 0.34
PACSIN3-211ENST00000539589 RASL12Q9NYN1 266 aa17.19■□□□□ 0.34
PACSIN3-211ENST00000539589 OR5AC2Q9NZP5 309 aa17.19■□□□□ 0.34
PACSIN3-211ENST00000539589 PFDN2Q9UHV9 154 aa17.19■□□□□ 0.34
PACSIN3-211ENST00000539589 AMDHD2Q9Y303 409 aa17.19■□□□□ 0.34
PACSIN3-211ENST00000539589 TRAV24A0A0B4J272 114 aa17.18■□□□□ 0.34
PACSIN3-211ENST00000539589 DEGS1O15121 323 aa17.18■□□□□ 0.34
PACSIN3-211ENST00000539589 BET1O15155 118 aa17.18■□□□□ 0.34
PACSIN3-211ENST00000539589 SCTP09683 121 aa17.18■□□□□ 0.34
PACSIN3-211ENST00000539589 S100A10P60903 97 aa17.18■□□□□ 0.34
PACSIN3-211ENST00000539589 SP6Q3SY56 376 aa17.18■□□□□ 0.34
PACSIN3-211ENST00000539589 TIMM23BQ5SRD1 257 aa17.18■□□□□ 0.34
PACSIN3-211ENST00000539589 WDR86Q86TI4 376 aa17.18■□□□□ 0.34
PACSIN3-211ENST00000539589 FAM185AQ8N0U4 392 aa17.18■□□□□ 0.34
PACSIN3-211ENST00000539589 RDH5Q92781 318 aa17.18■□□□□ 0.34
PACSIN3-211ENST00000539589 CXorf58Q96LI9 332 aa17.18■□□□□ 0.34
PACSIN3-211ENST00000539589 PIGMQ9H3S5 423 aa17.18■□□□□ 0.34
PACSIN3-211ENST00000539589 DNAJB11Q9UBS4 358 aa17.18■□□□□ 0.34
PACSIN3-211ENST00000539589 TRBV6-6A0A0A6YYG2 114 aa17.18■□□□□ 0.34
PACSIN3-211ENST00000539589 TMEM8BA6NDV4 472 aa17.18■□□□□ 0.34
PACSIN3-211ENST00000539589 TUBG1P23258 451 aa17.18■□□□□ 0.34
PACSIN3-211ENST00000539589 ALKBH6Q3KRA9 238 aa17.18■□□□□ 0.34
PACSIN3-211ENST00000539589 LRTM2Q8N967 370 aa17.18■□□□□ 0.34
PACSIN3-211ENST00000539589 RBPMSQ93062 196 aaKnown RBP17.18■□□□□ 0.34
PACSIN3-211ENST00000539589 MRPL24Q96A35 216 aaKnown RBP17.18■□□□□ 0.34
PACSIN3-211ENST00000539589 TUBG2Q9NRH3 451 aa17.18■□□□□ 0.34
PACSIN3-211ENST00000539589 JKAMPQ9P055 326 aa17.18■□□□□ 0.34
PACSIN3-211ENST00000539589 A0A1B0GW55 424 aa17.17■□□□□ 0.34
PACSIN3-211ENST00000539589 TMEM210A6NLX4 147 aa17.17■□□□□ 0.34
PACSIN3-211ENST00000539589 DUX4L2P0CJ85 424 aa17.17■□□□□ 0.34
PACSIN3-211ENST00000539589 DUX4L3P0CJ86 424 aa17.17■□□□□ 0.34
PACSIN3-211ENST00000539589 DUX4L4P0CJ87 422 aa17.17■□□□□ 0.34
PACSIN3-211ENST00000539589 DUX4L5P0CJ88 424 aa17.17■□□□□ 0.34
PACSIN3-211ENST00000539589 DUX4L6P0CJ89 424 aa17.17■□□□□ 0.34
PACSIN3-211ENST00000539589 DUX4L7P0CJ90 424 aa17.17■□□□□ 0.34
PACSIN3-211ENST00000539589 ZNF44P15621 663 aa17.17■□□□□ 0.34
PACSIN3-211ENST00000539589 CCKARP32238 428 aa17.17■□□□□ 0.34
PACSIN3-211ENST00000539589 OR8G1Q15617 311 aa17.17■□□□□ 0.34
PACSIN3-211ENST00000539589 IGFBP7Q16270 282 aa17.17■□□□□ 0.34
PACSIN3-211ENST00000539589 LIAT1Q6ZQX7 453 aa17.17■□□□□ 0.34
PACSIN3-211ENST00000539589 MRGPRGQ86SM5 289 aa17.17■□□□□ 0.34
PACSIN3-211ENST00000539589 OR11L1Q8NGX0 322 aa17.17■□□□□ 0.34
PACSIN3-211ENST00000539589 MRPL30Q8TCC3 161 aaKnown RBP17.17■□□□□ 0.34
PACSIN3-211ENST00000539589 AQP10Q96PS8 301 aa17.17■□□□□ 0.34
PACSIN3-211ENST00000539589 SDHAF2Q9NX18 166 aa17.17■□□□□ 0.34
PACSIN3-211ENST00000539589 DUX4Q9UBX2 424 aa17.17■□□□□ 0.34
PACSIN3-211ENST00000539589 KALRNO60229 2985 aa17.17■□□□□ 0.34
PACSIN3-211ENST00000539589 MPV17P39210 176 aa17.16■□□□□ 0.34
PACSIN3-211ENST00000539589 ERVK11-1P61568 191 aa17.16■□□□□ 0.34
PACSIN3-211ENST00000539589 LGI3Q8N145 548 aa17.16■□□□□ 0.34
PACSIN3-211ENST00000539589 FAM169BQ8N8A8 192 aa17.16■□□□□ 0.34
PACSIN3-211ENST00000539589 CNTNAP3BQ96NU0 1288 aa17.16■□□□□ 0.34
PACSIN3-211ENST00000539589 CNTNAP3Q9BZ76 1288 aa17.16■□□□□ 0.34
PACSIN3-211ENST00000539589 TMEM100Q9NV29 134 aa17.16■□□□□ 0.34
PACSIN3-211ENST00000539589 ADGRG4Q8IZF6 3080 aa17.16■□□□□ 0.34
PACSIN3-211ENST00000539589 IGHV2OR16-5A0A0B4J2B6 119 aa17.16■□□□□ 0.34
PACSIN3-211ENST00000539589 TRGV8A0A0C4DH27 118 aa17.16■□□□□ 0.34
PACSIN3-211ENST00000539589 ZNF154Q13106 437 aa17.16■□□□□ 0.34
PACSIN3-211ENST00000539589 Q6P435 159 aa17.16■□□□□ 0.34
PACSIN3-211ENST00000539589 ZNF565Q8N9K5 539 aa17.16■□□□□ 0.34
PACSIN3-211ENST00000539589 ST6GALNAC3Q8NDV1 305 aa17.16■□□□□ 0.34
PACSIN3-211ENST00000539589 OR1S1Q8NH92 325 aa17.16■□□□□ 0.34
PACSIN3-211ENST00000539589 STOML3Q8TAV4 291 aa17.16■□□□□ 0.34
PACSIN3-211ENST00000539589 GLYATL2Q8WU03 294 aa17.16■□□□□ 0.34
PACSIN3-211ENST00000539589 VKORC1Q9BQB6 163 aa17.16■□□□□ 0.34
PACSIN3-211ENST00000539589 FBXO9Q9UK97 447 aaPredicted RBP17.16■□□□□ 0.34
PACSIN3-211ENST00000539589 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.15■□□□□ 0.34
PACSIN3-211ENST00000539589 MFSD2BA6NFX1 497 aa17.15■□□□□ 0.34
PACSIN3-211ENST00000539589 CDIPTO14735 213 aa17.15■□□□□ 0.34
PACSIN3-211ENST00000539589 MPPED1O15442 326 aa17.15■□□□□ 0.34
PACSIN3-211ENST00000539589 PHF1O43189 567 aaPredicted RBP17.15■□□□□ 0.34
PACSIN3-211ENST00000539589 GNRHRP30968 328 aa17.15■□□□□ 0.34
PACSIN3-211ENST00000539589 SMCO1Q147U7 214 aa17.15■□□□□ 0.34
PACSIN3-211ENST00000539589 HERPUD1Q15011 391 aa17.15■□□□□ 0.34
PACSIN3-211ENST00000539589 ALKBH2Q6NS38 261 aa17.15■□□□□ 0.34
PACSIN3-211ENST00000539589 CCDC28AQ8IWP9 274 aa17.15■□□□□ 0.34
PACSIN3-211ENST00000539589 OR8G5Q8NG78 346 aa17.15■□□□□ 0.34
PACSIN3-211ENST00000539589 MSI2Q96DH6 328 aaKnown RBP17.15■□□□□ 0.34
PACSIN3-211ENST00000539589 NRIP2Q9BQI9 281 aa17.15■□□□□ 0.34
PACSIN3-211ENST00000539589 REG4Q9BYZ8 158 aa17.15■□□□□ 0.34
PACSIN3-211ENST00000539589 BCL2L14Q9BZR8 327 aa17.15■□□□□ 0.34
PACSIN3-211ENST00000539589 TUSC2O75896 110 aa17.14■□□□□ 0.34
PACSIN3-211ENST00000539589 PGA5P0DJD9 388 aa17.14■□□□□ 0.34
PACSIN3-211ENST00000539589 TPT1P13693 172 aaKnown RBP17.14■□□□□ 0.34
PACSIN3-211ENST00000539589 MDH2P40926 338 aaKnown RBP17.14■□□□□ 0.34
PACSIN3-211ENST00000539589 ZNF83P51522 516 aa17.14■□□□□ 0.34
PACSIN3-211ENST00000539589 NAAAQ02083 359 aa17.14■□□□□ 0.34
PACSIN3-211ENST00000539589 PAN3Q58A45 887 aaKnown RBP17.14■□□□□ 0.34
PACSIN3-211ENST00000539589 ZNF880Q6PDB4 577 aa17.14■□□□□ 0.34
PACSIN3-211ENST00000539589 C20orf204Q6ZNR8 217 aa17.14■□□□□ 0.34
PACSIN3-211ENST00000539589 FOXRED2Q8IWF2 684 aa17.14■□□□□ 0.34
PACSIN3-211ENST00000539589 C18orf12Q96KH6 178 aa17.14■□□□□ 0.34
PACSIN3-211ENST00000539589 SHARPINQ9H0F6 387 aa17.14■□□□□ 0.34
PACSIN3-211ENST00000539589 TREM2Q9NZC2 230 aa17.14■□□□□ 0.34
PACSIN3-211ENST00000539589 PURGQ9UJV8 347 aaKnown RBP17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms