RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 ZNF729A6NN14 1252 aaPredicted RBP10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 IFNL4K9M1U5 179 aa10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 RRP8O43159 456 aaKnown RBP10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 SEC11BP0C7V7 166 aa10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 AADACP22760 399 aa10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 RAB11AP62491 216 aa10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 TRA2AQ13595 282 aaKnown RBP eCLIP10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 CEACAM16Q2WEN9 425 aa10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 SSX9Q7RTT3 188 aa10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 ZNF610Q8N9Z0 462 aa10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 OR10AD1Q8NGE0 317 aa10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 COL27A1Q8IZC6 1860 aaPredicted RBP10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 PHOX2AO14813 284 aa10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 CA11O75493 328 aa10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 PGA5P0DJD9 388 aa10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 CDX1P47902 265 aaPredicted RBP10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 GNMTQ14749 295 aa10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 HMGN3Q15651 99 aa10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 LPAL2Q16609 132 aa10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 WDR25Q64LD2 544 aaPredicted RBP10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 TMEM42Q69YG0 159 aa10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 LCN15Q6UWW0 184 aa10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 AAED1Q7RTV5 226 aa10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 FRZBQ92765 325 aa10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 METTL9Q9H1A3 318 aa10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 UNKLQ9H9P5 680 aaKnown RBP10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 PLEKHA2Q9HB19 425 aa10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 TCFL5Q9UL49 500 aa10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 R4GN57 208 aa10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 CACNA1DQ01668 2161 aa10.81□□□□□ -0.68
SFSWAP-208ENST00000539506 TRAPPC6AO75865 159 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 OR7C1O76099 320 aaPredicted RBP10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 SCAF4O95104 1147 aaKnown RBP10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 P04436 131 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 TRGC1P0CF51 173 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 EDN3P14138 238 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 DYNLT3P51808 116 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 ASCL4Q6XD76 172 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 CPEB3Q8NE35 698 aaKnown RBP10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 SGCZQ96LD1 299 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 GINS3Q9BRX5 216 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 OR2H1Q9GZK4 316 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 ZNF442Q9H7R0 627 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 GLRX2Q9NS18 164 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 CRIM1Q9NZV1 1036 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 DMRT1Q9Y5R6 373 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 WRBO00258 174 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 HSD17B6O14756 317 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 SNRPCP09234 159 aaKnown RBP10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 RPL23AP62750 156 aaKnown RBP10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 USF2Q15853 346 aaPredicted RBP10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 IGFBP7Q16270 282 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 ABLIM2Q6H8Q1 611 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 TCEAL6Q6IPX3 200 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 SPSB3Q6PJ21 355 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 CALHM1Q8IU99 346 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 OR5T1Q8NG75 326 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 CPT1CQ8TCG5 803 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 PSMF1Q92530 271 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 SPSB1Q96BD6 273 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 FOXB1Q99853 325 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 PRDM13Q9H4Q3 707 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 UBE2J1Q9Y385 318 aaPredicted RBP10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 CFAP47Q6ZTR5 3102 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 hCG_38984A0A1B0GV85 526 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 ADAM20O43506 726 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 TMEM50AO95807 157 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 NRASP01111 189 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 NKX6-1P78426 367 aaPredicted RBP10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 RHEBQ15382 184 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 SPINK14Q6IE38 97 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 SLC25A24Q6NUK1 477 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 LIAT1Q6ZQX7 453 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 UBALD2Q8IYN6 164 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 OR2C3Q8N628 320 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 ABHD5Q8WTS1 349 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 WSB1Q9Y6I7 421 aa10.8□□□□□ -0.68
SFSWAP-208ENST00000539506 GJE1A6NN92 205 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 K7N7A8 449 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 YKT6O15498 198 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 SELLP14151 372 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 TCN2P20062 427 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 CCNOP22674 350 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 RBP2P50120 134 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 RPS16P62249 146 aaKnown RBP10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 FOXO1Q12778 655 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 C9orf135Q5VTT2 229 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 THOC3Q96J01 351 aaKnown RBP10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 GPR35Q9HC97 309 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 NECAP2Q9NVZ3 263 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 ST3GAL6Q9Y274 331 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 POMT1Q9Y6A1 747 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 FREM1Q5H8C1 2179 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 DOCK10Q96BY6 2186 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 PPP1R2P9O14990 202 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 CD55P08174 381 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 CELA3AP09093 270 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 GNRHRP30968 328 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 NPBWR2P48146 333 aa10.79□□□□□ -0.68
SFSWAP-208ENST00000539506 GFRA1P56159 465 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms