RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 GDF9O60383 454 aa12.71□□□□□ -0.37
CACNB1-206ENST00000539338 TPPP2P59282 170 aa12.71□□□□□ -0.37
CACNB1-206ENST00000539338 TNFAIP6P98066 277 aaPredicted RBP12.71□□□□□ -0.37
CACNB1-206ENST00000539338 COL19A1Q14993 1142 aa12.71□□□□□ -0.37
CACNB1-206ENST00000539338 MOB3AQ96BX8 217 aa12.71□□□□□ -0.37
CACNB1-206ENST00000539338 TMEM56Q96MV1 263 aa12.71□□□□□ -0.37
CACNB1-206ENST00000539338 ZNF107Q9UII5 783 aaPredicted RBP12.71□□□□□ -0.37
CACNB1-206ENST00000539338 HSBP1O75506 76 aa12.71□□□□□ -0.37
CACNB1-206ENST00000539338 FCER1GP30273 86 aa12.71□□□□□ -0.37
CACNB1-206ENST00000539338 HLA-DRB3P79483 266 aa12.71□□□□□ -0.37
CACNB1-206ENST00000539338 CHST5Q9GZS9 411 aa12.71□□□□□ -0.37
CACNB1-206ENST00000539338 TMEM38BQ9NVV0 291 aa12.71□□□□□ -0.37
CACNB1-206ENST00000539338 KCNE5Q9UJ90 142 aa12.71□□□□□ -0.37
CACNB1-206ENST00000539338 TINAGQ9UJW2 476 aa12.71□□□□□ -0.37
CACNB1-206ENST00000539338 PNPP00491 289 aa12.71□□□□□ -0.38
CACNB1-206ENST00000539338 KLF3P57682 345 aaPredicted RBP12.71□□□□□ -0.38
CACNB1-206ENST00000539338 NUFIP2Q7Z417 695 aaKnown RBP12.71□□□□□ -0.38
CACNB1-206ENST00000539338 CXXC4Q9H2H0 198 aa12.71□□□□□ -0.38
CACNB1-206ENST00000539338 DOK5Q9P104 306 aa12.71□□□□□ -0.38
CACNB1-206ENST00000539338 ONECUT1Q9UBC0 465 aa12.71□□□□□ -0.38
CACNB1-206ENST00000539338 NKX2-6A6NCS4 301 aa12.7□□□□□ -0.38
CACNB1-206ENST00000539338 NCBP2LA6PVI3 153 aaKnown RBP12.7□□□□□ -0.38
CACNB1-206ENST00000539338 HIKESHIQ53FT3 197 aa12.7□□□□□ -0.38
CACNB1-206ENST00000539338 ZNRF4Q8WWF5 429 aa12.7□□□□□ -0.38
CACNB1-206ENST00000539338 RGP1Q92546 391 aaPredicted RBP12.7□□□□□ -0.38
CACNB1-206ENST00000539338 C10orf35Q96D05 121 aa12.7□□□□□ -0.38
CACNB1-206ENST00000539338 PGLYRP3Q96LB9 341 aa12.7□□□□□ -0.38
CACNB1-206ENST00000539338 GHITMQ9H3K2 345 aa12.7□□□□□ -0.38
CACNB1-206ENST00000539338 CXCL2P19875 107 aa12.7□□□□□ -0.38
CACNB1-206ENST00000539338 TMEM147Q9BVK8 224 aa12.7□□□□□ -0.38
CACNB1-206ENST00000539338 TREM2Q9NZC2 230 aa12.7□□□□□ -0.38
CACNB1-206ENST00000539338 VDAC1P21796 283 aa12.7□□□□□ -0.38
CACNB1-206ENST00000539338 ATP5SQ99766 215 aa12.7□□□□□ -0.38
CACNB1-206ENST00000539338 CHRDL1Q9BU40 450 aa12.7□□□□□ -0.38
CACNB1-206ENST00000539338 IFT22Q9H7X7 185 aa12.7□□□□□ -0.38
CACNB1-206ENST00000539338 NAT8BQ9UHF3 227 aa12.7□□□□□ -0.38
CACNB1-206ENST00000539338 TPRP12270 2363 aaKnown RBP12.7□□□□□ -0.38
CACNB1-206ENST00000539338 XKRY2A2RUG3 117 aa12.7□□□□□ -0.38
CACNB1-206ENST00000539338 FGF2P09038 288 aa12.7□□□□□ -0.38
CACNB1-206ENST00000539338 PMELP40967 661 aa12.7□□□□□ -0.38
CACNB1-206ENST00000539338 TOMM20LQ6UXN7 152 aa12.7□□□□□ -0.38
CACNB1-206ENST00000539338 SLC16A13Q7RTY0 426 aa12.7□□□□□ -0.38
CACNB1-206ENST00000539338 SPACA3Q8IXA5 215 aa12.7□□□□□ -0.38
CACNB1-206ENST00000539338 MYOZ1Q9NP98 299 aaPredicted RBP12.7□□□□□ -0.38
CACNB1-206ENST00000539338 DXOO77932 396 aaKnown RBP12.69□□□□□ -0.38
CACNB1-206ENST00000539338 GYPAP02724 150 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 ERVS71-1P61550 626 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 HIST1H3AP68431 136 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 PLPPR5Q32ZL2 321 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 OR2T6Q8NHC8 308 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 IL36GQ9NZH8 169 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 OR1A1Q9P1Q5 309 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 A0A1W2PP11 408 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 CTSBP07858 339 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 NGFRP08138 427 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 PAX6P26367 422 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 RAB7AP51149 207 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 RNF151Q2KHN1 245 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 ZNF501Q96CX3 271 aaPredicted RBP12.69□□□□□ -0.38
CACNB1-206ENST00000539338 TMPRSS5Q9H3S3 457 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 EWSR1Q01844 656 aaKnown RBP eCLIP12.69□□□□□ -0.38
CACNB1-206ENST00000539338 MPV17LQ2QL34 196 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 TRAT1Q6PIZ9 186 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 PIMREGQ9BSJ6 248 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 RAB33BQ9H082 229 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 SLC26A1Q9H2B4 701 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 ELF5Q9UKW6 265 aaPredicted RBP12.69□□□□□ -0.38
CACNB1-206ENST00000539338 KCNK7Q9Y2U2 307 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 UNC13CQ8NB66 2214 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 CELA2AP08217 269 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 FAM87AP0C7U9 286 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 NBL1P41271 181 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 PAX5Q02548 391 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 FAM78BQ5VT40 261 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 PRO1933Q9H354 126 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 ZNHIT1O43257 154 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 HAND1O96004 215 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 BMI1P35226 326 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 BLNKQ8WV28 456 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 TNFSF18Q9UNG2 199 aa12.69□□□□□ -0.38
CACNB1-206ENST00000539338 KIAA1324LA8MWY0 1029 aaPredicted RBP12.68□□□□□ -0.38
CACNB1-206ENST00000539338 GNG4P50150 75 aa12.68□□□□□ -0.38
CACNB1-206ENST00000539338 NCMAPQ5T1S8 102 aa12.68□□□□□ -0.38
CACNB1-206ENST00000539338 HOGA1Q86XE5 327 aa12.68□□□□□ -0.38
CACNB1-206ENST00000539338 MRGPRFQ96AM1 343 aa12.68□□□□□ -0.38
CACNB1-206ENST00000539338 ZNFX1Q9P2E3 1918 aaKnown RBP12.68□□□□□ -0.38
CACNB1-206ENST00000539338 SLC25A5P05141 298 aaKnown RBP12.68□□□□□ -0.38
CACNB1-206ENST00000539338 RCC1P18754 421 aaPredicted RBP12.68□□□□□ -0.38
CACNB1-206ENST00000539338 R3HDM4Q96D70 268 aa12.68□□□□□ -0.38
CACNB1-206ENST00000539338 SLC7A10Q9NS82 523 aa12.68□□□□□ -0.38
CACNB1-206ENST00000539338 SLC45A2Q9UMX9 530 aa12.68□□□□□ -0.38
CACNB1-206ENST00000539338 LMX1BO60663 402 aa12.68□□□□□ -0.38
CACNB1-206ENST00000539338 UPK3AO75631 287 aa12.68□□□□□ -0.38
CACNB1-206ENST00000539338 FBP1P09467 338 aa12.68□□□□□ -0.38
CACNB1-206ENST00000539338 ATP5J2P56134 94 aa12.68□□□□□ -0.38
CACNB1-206ENST00000539338 RHOBP62745 196 aa12.68□□□□□ -0.38
CACNB1-206ENST00000539338 CCDC88CQ9P219 2028 aa12.68□□□□□ -0.38
CACNB1-206ENST00000539338 ARID2Q68CP9 1835 aa12.68□□□□□ -0.38
CACNB1-206ENST00000539338 CD1AP06126 327 aa12.68□□□□□ -0.38
CACNB1-206ENST00000539338 COX7A1P24310 79 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms