RNA–Protein interactions for RNA: ENST00000538573.1

LINC02408-202, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 4 BASIC

Gene LINC02408, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-202ENST00000538573 PPIAL4FP0DN26 164 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 PSG2P11465 335 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 MUC1P15941 1255 aaPredicted RBP4.34□□□□□ -1.71
LINC02408-202ENST00000538573 HIST1H1DP16402 221 aaKnown RBP4.34□□□□□ -1.71
LINC02408-202ENST00000538573 CHATP28329 748 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 CD40LGP29965 261 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 PRDX2P32119 198 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 PRSS3P35030 304 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 INPP1P49441 399 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 CEBPDP49716 269 aaPredicted RBP4.34□□□□□ -1.71
LINC02408-202ENST00000538573 EFNA4P52798 201 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 GNG2P59768 71 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 RPP30P78346 268 aaKnown RBP4.34□□□□□ -1.71
LINC02408-202ENST00000538573 DGCR2P98153 550 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 IL13RA2Q14627 380 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 ARL6IP1Q15041 203 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 ZNF181Q2M3W8 571 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 MPV17LQ2QL34 196 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 ZNF260Q3ZCT1 412 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 PAN3Q58A45 887 aaKnown RBP4.34□□□□□ -1.71
LINC02408-202ENST00000538573 NHLRC3Q5JS37 347 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 PLAC9Q5JTB6 97 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 SPIN3Q5JUX0 258 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 FAM209BQ5JX69 171 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 OLFML2AQ68BL7 652 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 Q6P435 159 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 PEG10Q86TG7 708 aaKnown RBP4.34□□□□□ -1.71
LINC02408-202ENST00000538573 LINC00596Q86U02 117 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 RTN4RL2Q86UN3 420 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 FAM90A1Q86YD7 464 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 Q8N402 240 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 BPIFB2Q8N4F0 458 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 CD177Q8N6Q3 437 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 GDPD1Q8N9F7 314 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 SUMF2Q8NBJ7 301 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 NRGNQ92686 78 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 GCDHQ92947 438 aaPredicted RBP4.34□□□□□ -1.71
LINC02408-202ENST00000538573 NINJ1Q92982 152 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 BORCS5Q969J3 196 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 YIPF5Q969M3 257 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 C20orf173Q96LM9 149 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 SULT4A1Q9BR01 284 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 THAP7Q9BT49 309 aaPredicted RBP4.34□□□□□ -1.71
LINC02408-202ENST00000538573 SRRQ9GZT4 340 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 DLL4Q9NR61 685 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 ABCB10Q9NRK6 738 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 ING3Q9NXR8 418 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 NLKQ9UBE8 527 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 ELF5Q9UKW6 265 aaPredicted RBP4.34□□□□□ -1.71
LINC02408-202ENST00000538573 HSF4Q9ULV5 492 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 KCNK7Q9Y2U2 307 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 PPIAL4AQ9Y536 164 aa4.34□□□□□ -1.71
LINC02408-202ENST00000538573 USP9XQ93008 2570 aaPredicted RBP4.34□□□□□ -1.72
LINC02408-202ENST00000538573 SMG1Q96Q15 3661 aaKnown RBP4.34□□□□□ -1.72
LINC02408-202ENST00000538573 FLNCQ14315 2725 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 IGKV1D-17A0A075B6S4 117 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 TRAV24A0A0B4J272 114 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 ISPDA4D126 451 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 MEIS3P1A6NDR6 274 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 FOXI3A8MTJ6 420 aaPredicted RBP4.33□□□□□ -1.72
LINC02408-202ENST00000538573 SERPINE3A8MV23 424 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 GABARAPH6UMI1 98 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 SLC33A1O00400 549 aaPredicted RBP4.33□□□□□ -1.72
LINC02408-202ENST00000538573 MFNGO00587 321 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 BET1O15155 118 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 CTDSPLO15194 276 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 SHOXO15266 292 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 PPIHO43447 177 aaKnown RBP4.33□□□□□ -1.72
LINC02408-202ENST00000538573 ORC5O43913 435 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 SSX4O60224 188 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 SSX5O60225 188 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 GYPAP02724 150 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 MELTFP08582 738 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 CSF3P09919 207 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 P2RX3P56373 397 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 KRTAP10-9P60411 292 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 BTG1P62324 171 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 MRPS10P82664 201 aaKnown RBP4.33□□□□□ -1.72
LINC02408-202ENST00000538573 MRPS11P82912 194 aaKnown RBP4.33□□□□□ -1.72
LINC02408-202ENST00000538573 COL10A1Q03692 680 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 RBM39Q14498 530 aaKnown RBP4.33□□□□□ -1.72
LINC02408-202ENST00000538573 ZNF146Q15072 292 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 ZMYND11Q15326 602 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 BAK1Q16611 211 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 PNLIPRP3Q17RR3 467 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 AVPI1Q5T686 147 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 C6orf183Q5T699 404 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 HACD4Q5VWC8 232 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 TEX36Q5VZQ5 186 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 TRIQKQ629K1 86 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 ZNF57Q68EA5 555 aaPredicted RBP4.33□□□□□ -1.72
LINC02408-202ENST00000538573 IDO2Q6ZQW0 420 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 DCDC5Q6ZRR9 648 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 TRAPPC6BQ86SZ2 158 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 ASCC1Q8N9N2 400 aaKnown RBP4.33□□□□□ -1.72
LINC02408-202ENST00000538573 SLC24A4Q8NFF2 622 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 OR52I2Q8NH67 350 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 SETD6Q8TBK2 473 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 RNF141Q8WVD5 230 aa4.33□□□□□ -1.72
LINC02408-202ENST00000538573 NUDCD2Q8WVJ2 157 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms