RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 OR51G1Q8NGK1 321 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 CCL4L1Q8NHW4 92 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 OR6C1Q96RD1 312 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 ST6GALNAC5Q9BVH7 336 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 MEGF9Q9H1U4 602 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 SLC17A4Q9Y2C5 497 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 LILRA5A6NI73 299 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 TRAF3IP2O43734 574 aaPredicted RBP9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 ZIC2O95409 532 aaPredicted RBP9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 HLA-HP01893 362 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 KRTDAPP60985 99 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 MSMO1Q15800 293 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 C6orf15Q6UXA7 325 aaPredicted RBP9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 CATSPERDQ86XM0 798 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 OR13G1Q8NGZ3 307 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 SAP25Q8TEE9 199 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 SLAMF6Q96DU3 332 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 FER1L6-AS2Q96M78 137 aa9.5□□□□□ -0.89
CLSTN3-207ENST00000537408 SCRG1O75711 98 aa9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 CEACAM5P06731 702 aa9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 MTCP1P56278 107 aa9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 RIPPLY3P57055 190 aa9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 LCN2P80188 198 aa9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 FDX2Q6P4F2 183 aa9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 DNM1P34Q6PK57 102 aa9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 PATE1Q8WXA2 126 aa9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 RNF166Q96A37 237 aaPredicted RBP9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 MANBALQ9NQG1 85 aa9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 DUXBA0A1W2PPF3 345 aa9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 A0A1W2PR48 441 aa9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 DIRC3C9JPN6 131 aa9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 SAMD13Q5VXD3 122 aa9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 BAGE3Q86Y29 109 aa9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 BAGE2Q86Y30 109 aa9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 TSSK2Q96PF2 358 aa9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 ABHD14AQ9BUJ0 271 aa9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 VWA8A3KMH1 1905 aa9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 A0A0U1RQK1 487 aa9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 ZNF891A8MT65 544 aaPredicted RBP9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 MMP23AO75900 390 aa9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 CD99P14209 185 aa9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 FBLP22087 321 aaKnown RBP9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 CTXN1P60606 82 aa9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 OR2C3Q8N628 320 aa9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 OR52L2PQ8NGH6 319 aa9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 SLC46A1Q96NT5 459 aa9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 PTPRDP23468 1912 aa9.49□□□□□ -0.89
CLSTN3-207ENST00000537408 A0A1W2PRS3 328 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 VSTM2BA6NLU5 285 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 ATXN7O15265 892 aaPredicted RBP9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 HIST1H1TP22492 207 aaPredicted RBP9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 GNRHRP30968 328 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 PTGER4P35408 488 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 ASCL1P50553 236 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 TLE3Q04726 772 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 OR2V1Q8NHB1 315 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 SERPINE3A8MV23 424 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 SDCBPO00560 298 aaPredicted RBP9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 MPIG6BO95866 241 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 ZNF823P16415 610 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 MRPS34P82930 218 aaKnown RBP9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 NSDHLQ15738 373 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 C1QL3Q5VWW1 255 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 KLHL24Q6TFL4 600 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 CYP2G1PQ6ZSU1 146 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 PINX1Q96BK5 328 aaKnown RBP9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 PLEKHF2Q9H8W4 249 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 TYMSP04818 313 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 OMGP23515 440 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 CDKN2AP42771 156 aaKnown RBP9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 PPP1CBP62140 327 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 TMEM256Q8N2U0 113 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 D2HGDHQ8N465 521 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 GATSQ8NAP1 163 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 ADOQ96SZ5 270 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 PTRH2Q9Y3E5 179 aaKnown RBP9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 A0A1W2PNV4 684 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 H0YGG7 62 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 CTSDP07339 412 aaPredicted RBP9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 ARF3P61204 181 aaPredicted RBP9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 ALG10Q5BKT4 473 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 WDR73Q6P4I2 378 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 OR5B3Q8NH48 314 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 SGCZQ96LD1 299 aa9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 MRPS16Q9Y3D3 137 aaKnown RBP9.48□□□□□ -0.89
CLSTN3-207ENST00000537408 GJE1A6NN92 205 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 OR7C2O60412 319 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 HIST1H1DP16402 221 aaKnown RBP9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 SNU13P55769 128 aaKnown RBP9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 TMPRSS3P57727 454 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 SHBQ15464 509 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 CTHRC1Q96CG8 243 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 ZDHHC11Q9H8X9 412 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 NXT1Q9UKK6 140 aaKnown RBP9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 GREB1Q4ZG55 1949 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 CENPVL1A0A0U1RR11 272 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 OR5B21A6NL26 309 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 CD55P08174 381 aa9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 IGFBP3P17936 291 aaPredicted RBP9.47□□□□□ -0.89
CLSTN3-207ENST00000537408 CSNK1G2P78368 415 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms