RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 DTX3Q8N9I9 347 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 MUL1Q969V5 352 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 MRPS24Q96EL2 167 aaKnown RBP10.04□□□□□ -0.8
PRKDC-207ENST00000536483 DERL3Q96Q80 235 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 GAL3ST2Q9H3Q3 398 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 RAB18Q9NP72 206 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 PCDHB16Q9NRJ7 776 aa10.04□□□□□ -0.8
PRKDC-207ENST00000536483 LSM2Q9Y333 95 aaKnown RBP10.04□□□□□ -0.8
PRKDC-207ENST00000536483 TRAV8-7A0A075B6U6 113 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 IGHV2-26A0A0B4J1V2 119 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 FAM90A22PA8MWA6 464 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 MYL12BO14950 172 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 PIN1P1O15428 100 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 IGLV1-47P01700 117 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 CELP19835 753 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 COX7A1P24310 79 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 AESQ08117 197 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 GPR176Q14439 515 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 RSU1Q15404 277 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 FAM189A2Q15884 450 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 KPRPQ5T749 579 aaPredicted RBP10.03□□□□□ -0.8
PRKDC-207ENST00000536483 DDI2Q5TDH0 399 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 Q6ZPA2 131 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 LHFPL4Q7Z7J7 247 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 DYNAPQ8N1N2 210 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 KLHDC1Q8N7A1 406 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 OR4C13Q8NGP0 309 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 OR13C5Q8NGS8 318 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 CFHR4Q92496 578 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 ISOC1Q96CN7 298 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 GPER1Q99527 375 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 CLEC7AQ9BXN2 247 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 METTL9Q9H1A3 318 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 RANBP3Q9H6Z4 567 aaPredicted RBP10.03□□□□□ -0.8
PRKDC-207ENST00000536483 OR6C3Q9NZP0 311 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 CKLFQ9UBR5 152 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 PLXNB1O43157 2135 aa10.03□□□□□ -0.8
PRKDC-207ENST00000536483 KBTBD11-OT1A0A1B0GTJ5 212 aa10.02□□□□□ -0.81
PRKDC-207ENST00000536483 ZNF729A6NN14 1252 aaPredicted RBP10.02□□□□□ -0.81
PRKDC-207ENST00000536483 NPIPB11E5RHQ5 1161 aa10.02□□□□□ -0.81
PRKDC-207ENST00000536483 SC5DO75845 299 aa10.02□□□□□ -0.81
PRKDC-207ENST00000536483 MMP23AO75900 390 aa10.02□□□□□ -0.81
PRKDC-207ENST00000536483 ARG1P05089 322 aa10.02□□□□□ -0.81
PRKDC-207ENST00000536483 OR3A4PP47883 348 aa10.02□□□□□ -0.81
PRKDC-207ENST00000536483 SNU13P55769 128 aaKnown RBP10.02□□□□□ -0.81
PRKDC-207ENST00000536483 RBM11P57052 281 aaKnown RBP10.02□□□□□ -0.81
PRKDC-207ENST00000536483 C17orf58Q2M2W7 97 aa10.02□□□□□ -0.81
PRKDC-207ENST00000536483 MPV17LQ2QL34 196 aa10.02□□□□□ -0.81
PRKDC-207ENST00000536483 KRBOX4Q5JUW0 171 aa10.02□□□□□ -0.81
PRKDC-207ENST00000536483 SYT6Q5T7P8 510 aaPredicted RBP10.02□□□□□ -0.81
PRKDC-207ENST00000536483 RSBN1Q5VWQ0 802 aaPredicted RBP10.02□□□□□ -0.81
PRKDC-207ENST00000536483 C11orf88Q6PI97 169 aa10.02□□□□□ -0.81
PRKDC-207ENST00000536483 SLC16A12Q6ZSM3 486 aa10.02□□□□□ -0.81
PRKDC-207ENST00000536483 ANKRD13BQ86YJ7 626 aa10.02□□□□□ -0.81
PRKDC-207ENST00000536483 LYG1Q8N1E2 194 aa10.02□□□□□ -0.81
PRKDC-207ENST00000536483 OSR2Q8N2R0 312 aa10.02□□□□□ -0.81
PRKDC-207ENST00000536483 ZFP41Q8N8Y5 198 aa10.02□□□□□ -0.81
PRKDC-207ENST00000536483 ZNF565Q8N9K5 539 aa10.02□□□□□ -0.81
PRKDC-207ENST00000536483 OR10A7Q8NGE5 316 aa10.02□□□□□ -0.81
PRKDC-207ENST00000536483 OR4P4Q8NGL7 312 aa10.02□□□□□ -0.81
PRKDC-207ENST00000536483 OR2T6Q8NHC8 308 aa10.02□□□□□ -0.81
PRKDC-207ENST00000536483 OR14A2Q96R54 314 aa10.02□□□□□ -0.81
PRKDC-207ENST00000536483 MND1Q9BWT6 205 aa10.02□□□□□ -0.81
PRKDC-207ENST00000536483 BARHL1Q9BZE3 327 aa10.02□□□□□ -0.81
PRKDC-207ENST00000536483 ISYNA1Q9NPH2 558 aa10.02□□□□□ -0.81
PRKDC-207ENST00000536483 ST3GAL6Q9Y274 331 aa10.02□□□□□ -0.81
PRKDC-207ENST00000536483 A6NDX4 124 aa10.01□□□□□ -0.81
PRKDC-207ENST00000536483 PTGES3LE9PB15 166 aa10.01□□□□□ -0.81
PRKDC-207ENST00000536483 CDRT1O95170 752 aa10.01□□□□□ -0.81
PRKDC-207ENST00000536483 VSIG10L2P0DP72 767 aa10.01□□□□□ -0.81
PRKDC-207ENST00000536483 CDK2P24941 298 aa10.01□□□□□ -0.81
PRKDC-207ENST00000536483 MAPK3P27361 379 aaPredicted RBP10.01□□□□□ -0.81
PRKDC-207ENST00000536483 SPHARQ15513 63 aa10.01□□□□□ -0.81
PRKDC-207ENST00000536483 NEDD8Q15843 81 aa10.01□□□□□ -0.81
PRKDC-207ENST00000536483 PIGYQ3MUY2 71 aa10.01□□□□□ -0.81
PRKDC-207ENST00000536483 GAPTQ8N292 157 aa10.01□□□□□ -0.81
PRKDC-207ENST00000536483 Q8N2B8 174 aa10.01□□□□□ -0.81
PRKDC-207ENST00000536483 ABHD12Q8N2K0 398 aa10.01□□□□□ -0.81
PRKDC-207ENST00000536483 NKAIN3Q8N8D7 197 aa10.01□□□□□ -0.81
PRKDC-207ENST00000536483 ZNF596Q8TC21 504 aa10.01□□□□□ -0.81
PRKDC-207ENST00000536483 CREB3L1Q96BA8 519 aa10.01□□□□□ -0.81
PRKDC-207ENST00000536483 ORAI1Q96D31 301 aa10.01□□□□□ -0.81
PRKDC-207ENST00000536483 UQCC2Q9BRT2 126 aa10.01□□□□□ -0.81
PRKDC-207ENST00000536483 RCC2Q9P258 522 aaKnown RBP10.01□□□□□ -0.81
PRKDC-207ENST00000536483 GHRLQ9UBU3 117 aa10.01□□□□□ -0.81
PRKDC-207ENST00000536483 TCF19Q9Y242 345 aa10.01□□□□□ -0.81
PRKDC-207ENST00000536483 FAM90A10PA6NDY2 464 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 FAM90A18PA6NE21 464 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 FAM90A16PA6NEW6 464 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 FAM90A20PA6NIJ5 464 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 FAM90A7PA6NKC0 464 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 FAM90A12PA8MX19 464 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 FAM90A5PA8MXJ8 464 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 FAM90A23PA8MXZ1 464 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 LY6LH3BQJ8 138 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 HTR3BO95264 441 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 CSTBP04080 98 aaKnown RBP10□□□□□ -0.81
PRKDC-207ENST00000536483 GLAP06280 429 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 FAM90A15PP0C7V4 464 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 FAM90A13PP0C7W8 464 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms