RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 MPC1Q9Y5U8 109 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 DNAJC13O75165 2243 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 TRBV6-6A0A0A6YYG2 114 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 PIGBOS1A0A0B4J2F0 54 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 IGKV1-6A0A0C4DH72 117 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 IGSF23A1L1A6 192 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 ZNF98A6NK75 572 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 MT-ND4LP03901 98 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 RAB5BP61020 215 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 VAMP2P63027 116 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 RNPS1Q15287 305 aaKnown RBP13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 ETV3LQ6ZN32 361 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 TMEM182Q6ZP80 229 aaPredicted RBP13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 C5orf24Q7Z6I8 188 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 ZNF573Q86YE8 665 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 SUMF1Q8NBK3 374 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 HES7Q9BYE0 225 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 ESRP2Q9H6T0 727 aaKnown RBP13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 KCNJ16Q9NPI9 418 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 CCL28Q9NRJ3 127 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 IL36RNQ9UBH0 155 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 RPL35P42766 123 aaKnown RBP13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 ASCL1P50553 236 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 CLINT1Q14677 625 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 AKIRIN2Q53H80 203 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 AWAT1Q58HT5 328 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 PCSK4Q6UW60 755 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 SUMF2Q8NBJ7 301 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 OR5D13Q8NGL4 314 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 OR2G3Q8NGZ4 309 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 FAM213BQ8TBF2 198 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 OR5B21A6NL26 309 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 ANKRD30BLA7E2S9 258 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 FAM166BA8MTA8 275 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 C21orf140B9A014 251 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 H0Y980 276 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 HSD17B6O14756 317 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 SYNGR1O43759 233 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 SSSCA1O60232 199 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 PGLYRP1O75594 196 aaPredicted RBP13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 IFNA4P05014 189 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 ATP6V0CP27449 155 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 S100GP29377 79 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 BAXQ07812 192 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 DCAF10Q5QP82 559 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 CDCP2Q5VXM1 449 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 SHEQ5VZ18 495 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 TMEM251Q8N6I4 163 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 OR8G5Q8NG78 346 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 ZNF407Q9C0G0 2248 aa13.7□□□□□ -0.22
CHMP1A-202ENST00000535997 MUC3AQ02505 3323 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 HSPB6O14558 160 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 ZNHIT1O43257 154 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 SNRNP70P08621 437 aaKnown RBP13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 PTAFRP25105 342 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 GNG3P63215 75 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 LPAL2Q16609 132 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 TMEM164Q5U3C3 297 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 OR5C1Q8NGR4 320 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 MRPL30Q8TCC3 161 aaKnown RBP13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 C2CD4CQ8TF44 421 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 TMEM171Q8WVE6 324 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 MAGT1Q9H0U3 335 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 KNTC1P50748 2209 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 COL6A3P12111 3177 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 BTBD17A6NE02 478 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 M0R036 132 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 ZNF44P15621 663 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 OMGP23515 440 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 F2RP25116 425 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 AKR1C3P42330 323 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 TCEAL6Q6IPX3 200 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 IL22RA1Q8N6P7 574 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 OR1J1Q8NGS3 322 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 TCEAL3Q969E4 200 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 HIST1H2BAQ96A08 127 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 GNPNAT1Q96EK6 184 aaPredicted RBP13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 IP6K3Q96PC2 410 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 COA4Q9NYJ1 87 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 FBXO7Q9Y3I1 522 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 OR2W1Q9Y3N9 320 aa13.69□□□□□ -0.22
CHMP1A-202ENST00000535997 C1orf196B1AJZ1 125 aa13.68□□□□□ -0.22
CHMP1A-202ENST00000535997 ITGA3P26006 1051 aa13.68□□□□□ -0.22
CHMP1A-202ENST00000535997 IL24Q13007 206 aa13.68□□□□□ -0.22
CHMP1A-202ENST00000535997 HABP2Q14520 560 aaPredicted RBP13.68□□□□□ -0.22
CHMP1A-202ENST00000535997 RHEBQ15382 184 aa13.68□□□□□ -0.22
CHMP1A-202ENST00000535997 C20orf204Q6ZNR8 217 aa13.68□□□□□ -0.22
CHMP1A-202ENST00000535997 MCEMP1Q8IX19 187 aa13.68□□□□□ -0.22
CHMP1A-202ENST00000535997 ZFP82Q8N141 532 aa13.68□□□□□ -0.22
CHMP1A-202ENST00000535997 FAM58AQ8N1B3 248 aa13.68□□□□□ -0.22
CHMP1A-202ENST00000535997 OR10J5Q8NHC4 309 aa13.68□□□□□ -0.22
CHMP1A-202ENST00000535997 SFT2D1Q8WV19 159 aa13.68□□□□□ -0.22
CHMP1A-202ENST00000535997 GPHA2Q96T91 129 aa13.68□□□□□ -0.22
CHMP1A-202ENST00000535997 PLA2G3Q9NZ20 509 aa13.68□□□□□ -0.22
CHMP1A-202ENST00000535997 FOXJ2Q9P0K8 574 aa13.68□□□□□ -0.22
CHMP1A-202ENST00000535997 TRAV24A0A0B4J272 114 aa13.67□□□□□ -0.22
CHMP1A-202ENST00000535997 HS3ST1O14792 307 aa13.67□□□□□ -0.22
CHMP1A-202ENST00000535997 CHST1O43916 411 aa13.67□□□□□ -0.22
CHMP1A-202ENST00000535997 APLNRP35414 380 aa13.67□□□□□ -0.22
CHMP1A-202ENST00000535997 PPP1CCP36873 323 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms