RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 LCNL1Q6ZST4 164 aa10.22□□□□□ -0.77
TNFRSF1A-207ENST00000535958 Q8NFD4 153 aa10.22□□□□□ -0.77
TNFRSF1A-207ENST00000535958 OR10A7Q8NGE5 316 aa10.22□□□□□ -0.77
TNFRSF1A-207ENST00000535958 OR5D14Q8NGL3 314 aa10.22□□□□□ -0.77
TNFRSF1A-207ENST00000535958 OR2T10Q8NGZ9 312 aa10.22□□□□□ -0.77
TNFRSF1A-207ENST00000535958 RFESDQ8TAC1 157 aa10.22□□□□□ -0.77
TNFRSF1A-207ENST00000535958 TSEN15Q8WW01 171 aaKnown RBP10.22□□□□□ -0.77
TNFRSF1A-207ENST00000535958 CIB1Q99828 191 aa10.22□□□□□ -0.77
TNFRSF1A-207ENST00000535958 RASL11BQ9BPW5 248 aa10.22□□□□□ -0.77
TNFRSF1A-207ENST00000535958 FAM192AQ9GZU8 254 aa10.22□□□□□ -0.77
TNFRSF1A-207ENST00000535958 GABARAPL1Q9H0R8 117 aa10.22□□□□□ -0.77
TNFRSF1A-207ENST00000535958 LIN7CQ9NUP9 197 aaKnown RBP10.22□□□□□ -0.77
TNFRSF1A-207ENST00000535958 FRRS1LQ9P0K9 344 aa10.22□□□□□ -0.77
TNFRSF1A-207ENST00000535958 MYRFQ9Y2G1 1151 aa10.22□□□□□ -0.77
TNFRSF1A-207ENST00000535958 SLC16A6O15403 523 aa10.21□□□□□ -0.77
TNFRSF1A-207ENST00000535958 FCGR1AP12314 374 aa10.21□□□□□ -0.77
TNFRSF1A-207ENST00000535958 SSTR5P35346 364 aa10.21□□□□□ -0.77
TNFRSF1A-207ENST00000535958 GPR12P47775 334 aa10.21□□□□□ -0.77
TNFRSF1A-207ENST00000535958 REG1BP48304 166 aa10.21□□□□□ -0.77
TNFRSF1A-207ENST00000535958 KCNJ3P48549 501 aa10.21□□□□□ -0.77
TNFRSF1A-207ENST00000535958 CCR9P51686 369 aa10.21□□□□□ -0.77
TNFRSF1A-207ENST00000535958 ISL1P61371 349 aa10.21□□□□□ -0.77
TNFRSF1A-207ENST00000535958 KISS1Q15726 138 aa10.21□□□□□ -0.77
TNFRSF1A-207ENST00000535958 ZSCAN26Q16670 478 aa10.21□□□□□ -0.77
TNFRSF1A-207ENST00000535958 LPCAT4Q643R3 524 aa10.21□□□□□ -0.77
TNFRSF1A-207ENST00000535958 SLC16A12Q6ZSM3 486 aa10.21□□□□□ -0.77
TNFRSF1A-207ENST00000535958 TGIF2LXQ8IUE1 241 aa10.21□□□□□ -0.77
TNFRSF1A-207ENST00000535958 SERPINA12Q8IW75 414 aa10.21□□□□□ -0.77
TNFRSF1A-207ENST00000535958 OR51A4Q8NGJ6 313 aa10.21□□□□□ -0.77
TNFRSF1A-207ENST00000535958 CNIH3Q8TBE1 160 aa10.21□□□□□ -0.77
TNFRSF1A-207ENST00000535958 EME1Q96AY2 570 aa10.21□□□□□ -0.77
TNFRSF1A-207ENST00000535958 RNFT2Q96EX2 444 aa10.21□□□□□ -0.77
TNFRSF1A-207ENST00000535958 ASCL2Q99929 193 aa10.21□□□□□ -0.77
TNFRSF1A-207ENST00000535958 OSBPL10Q9BXB5 764 aa10.21□□□□□ -0.77
TNFRSF1A-207ENST00000535958 DCLRE1BQ9H816 532 aa10.21□□□□□ -0.77
TNFRSF1A-207ENST00000535958 DHDHQ9UQ10 334 aa10.21□□□□□ -0.77
TNFRSF1A-207ENST00000535958 ZNF256Q9Y2P7 627 aaPredicted RBP10.21□□□□□ -0.77
TNFRSF1A-207ENST00000535958 IGHV3-72A0A0B4J1Y9 119 aa10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 IGHV1-3A0A0C4DH29 117 aa10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 A0A1W2PPE3 182 aa10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 SNTNA6NMZ2 147 aa10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 J3QLW9 94 aa10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 ELANEP08246 267 aa10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 ZNF19P17023 458 aa10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 NANOS3P60323 173 aaKnown RBP10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 ZNF816Q0VGE8 651 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 FOXE3Q13461 319 aa10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 DIAPH2-AS1Q14236 149 aa10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 IL13RA2Q14627 380 aa10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 CDK5R1Q15078 307 aa10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 RSU1Q15404 277 aa10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 ZNF260Q3ZCT1 412 aa10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 UTF1Q5T230 341 aa10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 ZNF691Q5VV52 312 aa10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 IZUMO1Q8IYV9 350 aa10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 OR10AC1Q8NH08 325 aa10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 TNFAIP8L1Q8WVP5 186 aa10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 EAF1Q96JC9 268 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 C4orf36Q96KX1 117 aa10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 ABCG5Q9H222 651 aa10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 NCOR1P1Q9H4R4 102 aa10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 PALMDQ9NP74 551 aa10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 LSM4Q9Y4Z0 139 aaKnown RBP10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 ORC6Q9Y5N6 252 aa10.2□□□□□ -0.78
TNFRSF1A-207ENST00000535958 SDCBPO00560 298 aaPredicted RBP10.19□□□□□ -0.78
TNFRSF1A-207ENST00000535958 OR5H8P0DN80 308 aa10.19□□□□□ -0.78
TNFRSF1A-207ENST00000535958 CDX1P47902 265 aaPredicted RBP10.19□□□□□ -0.78
TNFRSF1A-207ENST00000535958 ALKBH1Q13686 389 aaKnown RBP10.19□□□□□ -0.78
TNFRSF1A-207ENST00000535958 KIR2DS1Q14954 304 aa10.19□□□□□ -0.78
TNFRSF1A-207ENST00000535958 FDX2Q6P4F2 183 aa10.19□□□□□ -0.78
TNFRSF1A-207ENST00000535958 SATL1Q86VE3 508 aa10.19□□□□□ -0.78
TNFRSF1A-207ENST00000535958 NEK7Q8TDX7 302 aa10.19□□□□□ -0.78
TNFRSF1A-207ENST00000535958 C4orf3Q8WVX3 66 aa10.19□□□□□ -0.78
TNFRSF1A-207ENST00000535958 S100A13Q99584 98 aa10.19□□□□□ -0.78
TNFRSF1A-207ENST00000535958 GABARAPL3Q9BY60 117 aa10.19□□□□□ -0.78
TNFRSF1A-207ENST00000535958 AP4S1Q9Y587 144 aa10.19□□□□□ -0.78
TNFRSF1A-207ENST00000535958 SMAD5-AS1Q9Y6J3 95 aa10.19□□□□□ -0.78
TNFRSF1A-207ENST00000535958 TRAV24A0A0B4J272 114 aa10.18□□□□□ -0.78
TNFRSF1A-207ENST00000535958 TMEM30CPA0ZSE6 113 aa10.18□□□□□ -0.78
TNFRSF1A-207ENST00000535958 NPIPB11E5RHQ5 1161 aa10.18□□□□□ -0.78
TNFRSF1A-207ENST00000535958 TXNL1O43396 289 aa10.18□□□□□ -0.78
TNFRSF1A-207ENST00000535958 CGB3P0DN86 165 aa10.18□□□□□ -0.78
TNFRSF1A-207ENST00000535958 CGB7P0DN87 165 aa10.18□□□□□ -0.78
TNFRSF1A-207ENST00000535958 RAB3AP20336 220 aa10.18□□□□□ -0.78
TNFRSF1A-207ENST00000535958 CHATP28329 748 aa10.18□□□□□ -0.78
TNFRSF1A-207ENST00000535958 SOX6P35712 828 aa10.18□□□□□ -0.78
TNFRSF1A-207ENST00000535958 ZP1P60852 638 aa10.18□□□□□ -0.78
TNFRSF1A-207ENST00000535958 FAM27D1Q5T7N8 215 aa10.18□□□□□ -0.78
TNFRSF1A-207ENST00000535958 RSBN1Q5VWQ0 802 aaPredicted RBP10.18□□□□□ -0.78
TNFRSF1A-207ENST00000535958 MEDAGQ5VYS4 303 aa10.18□□□□□ -0.78
TNFRSF1A-207ENST00000535958 ELP2Q6IA86 826 aa10.18□□□□□ -0.78
TNFRSF1A-207ENST00000535958 TMEM65Q6PI78 240 aa10.18□□□□□ -0.78
TNFRSF1A-207ENST00000535958 AMIGO2Q86SJ2 522 aa10.18□□□□□ -0.78
TNFRSF1A-207ENST00000535958 ACBD7Q8N6N7 88 aa10.18□□□□□ -0.78
TNFRSF1A-207ENST00000535958 PXT1Q8NFP0 134 aa10.18□□□□□ -0.78
TNFRSF1A-207ENST00000535958 OR8H1Q8NGG4 311 aa10.18□□□□□ -0.78
TNFRSF1A-207ENST00000535958 PLPPR1Q8TBJ4 325 aa10.18□□□□□ -0.78
TNFRSF1A-207ENST00000535958 TRUB1Q8WWH5 349 aaKnown RBP10.18□□□□□ -0.78
TNFRSF1A-207ENST00000535958 DPCDQ9BVM2 203 aaPredicted RBP10.18□□□□□ -0.78
TNFRSF1A-207ENST00000535958 LINC00574Q9H8X3 128 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms