RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 RPRMQ9NS64 109 aa11.52□□□□□ -0.57
HDAC4-214ENST00000535493 CFAP47Q6ZTR5 3102 aa11.52□□□□□ -0.57
HDAC4-214ENST00000535493 CACNA1EQ15878 2313 aa11.52□□□□□ -0.57
HDAC4-214ENST00000535493 PI4KAP42356 2102 aa11.52□□□□□ -0.57
HDAC4-214ENST00000535493 PHOX2AO14813 284 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 ZIC3O60481 467 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 TUBG1P23258 451 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 RBM11P57052 281 aaKnown RBP11.51□□□□□ -0.57
HDAC4-214ENST00000535493 PSG4Q00888 419 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 CNN3Q15417 329 aaKnown RBP11.51□□□□□ -0.57
HDAC4-214ENST00000535493 GUSBP11Q6P575 273 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 OR1K1Q8NGR3 316 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 OR1F12Q8NHA8 337 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 RNF138Q8WVD3 245 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 EXTL1Q92935 676 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 UFSP2Q9NUQ7 469 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 A0A087X0M5 115 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 A0A1B0GX30 115 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 BCL3P20749 454 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 PAX9P55771 341 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 PRR18Q8N4B5 295 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 PLPPR1Q8TBJ4 325 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 POM121Q96HA1 1249 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 PACRGQ96M98 296 aaPredicted RBP11.51□□□□□ -0.57
HDAC4-214ENST00000535493 IGLV3-12A0A075B6K2 115 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 A0A1B0GW64 132 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 CDS2O95674 445 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 SNRPCP09234 159 aaKnown RBP11.51□□□□□ -0.57
HDAC4-214ENST00000535493 SELLP14151 372 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 ZNF506Q5JVG8 444 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 FAM27BQ5VT28 67 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 FAM90A2PQ658T7 463 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 FADS6Q8N9I5 356 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 ZNF488Q96MN9 340 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 UNKLQ9H9P5 680 aaKnown RBP11.51□□□□□ -0.57
HDAC4-214ENST00000535493 TAAR3PQ9P1P4 343 aa11.51□□□□□ -0.57
HDAC4-214ENST00000535493 IGLV3-32A0A0A0MS00 114 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 SLC22A20A6NK97 555 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 IFNL4K9M1U5 179 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 HSPB1P04792 205 aaKnown RBP11.5□□□□□ -0.57
HDAC4-214ENST00000535493 METTL15P1P0C7V9 234 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 ELLP55199 621 aaPredicted RBP11.5□□□□□ -0.57
HDAC4-214ENST00000535493 HIST1H3AP68431 136 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 HIST2H3PS2Q5TEC6 136 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 Q6ZRM9 215 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 LHFPL2Q6ZUX7 228 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 HIST1H2BLQ99880 126 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 SLC25A31Q9H0C2 315 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 DKKL1Q9UK85 242 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 SPENQ96T58 3664 aaKnown RBP11.5□□□□□ -0.57
HDAC4-214ENST00000535493 DNAJC13O75165 2243 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 IGKV1-6A0A0C4DH72 117 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 A0A0G2JMM0 328 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 A0A1W2PPB8 328 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 A0A1W2PRS3 328 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 KIR3DP1A8MWS1 328 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 TK1P04183 234 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 DDTP30046 118 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 GPM6AP51674 278 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 PRSS8Q16651 343 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 HLA-BQ31612 363 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 C20orf204Q6ZNR8 217 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 SMRP1Q8NCR6 262 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 IL1F10Q8WWZ1 152 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 WFIKKN1Q96NZ8 548 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 OPA3Q9H6K4 179 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 OCIAD1Q9NX40 245 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 LRFN1Q9P244 771 aa11.5□□□□□ -0.57
HDAC4-214ENST00000535493 A0A087WZY1 265 aa11.49□□□□□ -0.57
HDAC4-214ENST00000535493 A0A1W2PQM1 296 aa11.49□□□□□ -0.57
HDAC4-214ENST00000535493 IL2RGP31785 369 aa11.49□□□□□ -0.57
HDAC4-214ENST00000535493 RPS16P62249 146 aaKnown RBP11.49□□□□□ -0.57
HDAC4-214ENST00000535493 TLE4Q04727 773 aa11.49□□□□□ -0.57
HDAC4-214ENST00000535493 ARL16Q0P5N6 197 aa11.49□□□□□ -0.57
HDAC4-214ENST00000535493 ZNF726P1Q15940 193 aa11.49□□□□□ -0.57
HDAC4-214ENST00000535493 CEACAM16Q2WEN9 425 aa11.49□□□□□ -0.57
HDAC4-214ENST00000535493 NMSQ5H8A3 153 aa11.49□□□□□ -0.57
HDAC4-214ENST00000535493 CABLES2Q9BTV7 478 aa11.49□□□□□ -0.57
HDAC4-214ENST00000535493 PROK2Q9HC23 129 aa11.49□□□□□ -0.57
HDAC4-214ENST00000535493 PLA2G3Q9NZ20 509 aa11.49□□□□□ -0.57
HDAC4-214ENST00000535493 SMG1Q96Q15 3661 aaKnown RBP11.49□□□□□ -0.57
HDAC4-214ENST00000535493 A0A087WWC5 75 aa11.49□□□□□ -0.57
HDAC4-214ENST00000535493 A0A096LPE4 126 aa11.49□□□□□ -0.57
HDAC4-214ENST00000535493 IGHV3-64DA0A0J9YX35 117 aa11.49□□□□□ -0.57
HDAC4-214ENST00000535493 A0A1W2PPZ6 126 aa11.49□□□□□ -0.57
HDAC4-214ENST00000535493 CEBPZOSA8MTT3 80 aa11.49□□□□□ -0.57
HDAC4-214ENST00000535493 ZNF732B4DXR9 585 aa11.49□□□□□ -0.57
HDAC4-214ENST00000535493 HS3ST1O14792 307 aa11.49□□□□□ -0.57
HDAC4-214ENST00000535493 GALR2O43603 387 aaPredicted RBP11.49□□□□□ -0.57
HDAC4-214ENST00000535493 EDN3P14138 238 aa11.49□□□□□ -0.57
HDAC4-214ENST00000535493 ZFP36L1Q07352 338 aaKnown RBP11.49□□□□□ -0.57
HDAC4-214ENST00000535493 CLN3Q13286 438 aa11.49□□□□□ -0.57
HDAC4-214ENST00000535493 ZNF295-AS1Q8N0V1 137 aa11.49□□□□□ -0.57
HDAC4-214ENST00000535493 RNASE11Q8TAA1 199 aaKnown RBP11.49□□□□□ -0.57
HDAC4-214ENST00000535493 MISP3Q96FF7 219 aa11.49□□□□□ -0.57
HDAC4-214ENST00000535493 TMEM56Q96MV1 263 aa11.49□□□□□ -0.57
HDAC4-214ENST00000535493 TMEM56-RWDD3S4R434 201 aa11.49□□□□□ -0.57
HDAC4-214ENST00000535493 BOD1L1Q8NFC6 3051 aa11.48□□□□□ -0.57
HDAC4-214ENST00000535493 DKK1O94907 266 aa11.48□□□□□ -0.57
HDAC4-214ENST00000535493 PSG2P11465 335 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms