RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 RIGQ13278 110 aa15.93■□□□□ 0.14
SFSWAP-203ENST00000535236 CLEC18BQ6UXF7 455 aa15.93■□□□□ 0.14
SFSWAP-203ENST00000535236 PTBP3O95758 552 aaKnown RBP15.92■□□□□ 0.14
SFSWAP-203ENST00000535236 CD160O95971 181 aa15.92■□□□□ 0.14
SFSWAP-203ENST00000535236 OR4C5Q8NGB2 326 aa15.92■□□□□ 0.14
SFSWAP-203ENST00000535236 CHAC2Q8WUX2 184 aa15.92■□□□□ 0.14
SFSWAP-203ENST00000535236 CBY3A6NI87 242 aa15.92■□□□□ 0.14
SFSWAP-203ENST00000535236 BGLAPP02818 100 aa15.92■□□□□ 0.14
SFSWAP-203ENST00000535236 COL8A1P27658 744 aa15.92■□□□□ 0.14
SFSWAP-203ENST00000535236 RNF122Q9H9V4 155 aa15.92■□□□□ 0.14
SFSWAP-203ENST00000535236 PTPRZ1P23471 2315 aaPredicted RBP15.92■□□□□ 0.14
SFSWAP-203ENST00000535236 C11orf94C9JXX5 98 aa15.92■□□□□ 0.14
SFSWAP-203ENST00000535236 VDAC1P21796 283 aa15.92■□□□□ 0.14
SFSWAP-203ENST00000535236 PSMB2P49721 201 aa15.92■□□□□ 0.14
SFSWAP-203ENST00000535236 LIPGQ9Y5X9 500 aa15.92■□□□□ 0.14
SFSWAP-203ENST00000535236 RBFOX3A6NFN3 312 aa15.92■□□□□ 0.14
SFSWAP-203ENST00000535236 B4E171 279 aa15.92■□□□□ 0.14
SFSWAP-203ENST00000535236 SYNGR1O43759 233 aa15.92■□□□□ 0.14
SFSWAP-203ENST00000535236 ARG1P05089 322 aa15.92■□□□□ 0.14
SFSWAP-203ENST00000535236 RNF224P0DH78 156 aa15.92■□□□□ 0.14
SFSWAP-203ENST00000535236 TSPAN7P41732 249 aa15.92■□□□□ 0.14
SFSWAP-203ENST00000535236 C9orf40Q8IXQ3 194 aa15.92■□□□□ 0.14
SFSWAP-203ENST00000535236 NFAM1Q8NET5 270 aaPredicted RBP15.92■□□□□ 0.14
SFSWAP-203ENST00000535236 OR1L8Q8NGR8 309 aa15.92■□□□□ 0.14
SFSWAP-203ENST00000535236 PRR13Q9NZ81 148 aa15.92■□□□□ 0.14
SFSWAP-203ENST00000535236 ZNF273Q14593 569 aa15.92■□□□□ 0.14
SFSWAP-203ENST00000535236 TMEM183BQ1AE95 376 aa15.92■□□□□ 0.14
SFSWAP-203ENST00000535236 DIRC2Q96SL1 478 aa15.92■□□□□ 0.14
SFSWAP-203ENST00000535236 MFNGO00587 321 aa15.91■□□□□ 0.14
SFSWAP-203ENST00000535236 CA11O75493 328 aa15.91■□□□□ 0.14
SFSWAP-203ENST00000535236 ZBTB34Q8NCN2 500 aa15.91■□□□□ 0.14
SFSWAP-203ENST00000535236 OR10D4PQ8NGN7 298 aa15.91■□□□□ 0.14
SFSWAP-203ENST00000535236 FAM222BQ8WU58 562 aa15.91■□□□□ 0.14
SFSWAP-203ENST00000535236 PHYHIPLQ96FC7 376 aa15.91■□□□□ 0.14
SFSWAP-203ENST00000535236 P2RX4Q99571 388 aa15.91■□□□□ 0.14
SFSWAP-203ENST00000535236 OR2W1Q9Y3N9 320 aa15.91■□□□□ 0.14
SFSWAP-203ENST00000535236 AUP1Q9Y679 476 aa15.91■□□□□ 0.14
SFSWAP-203ENST00000535236 M0R2Z0 102 aa15.91■□□□□ 0.14
SFSWAP-203ENST00000535236 RGS13O14921 159 aa15.91■□□□□ 0.14
SFSWAP-203ENST00000535236 CRISP2P16562 243 aa15.91■□□□□ 0.14
SFSWAP-203ENST00000535236 TCL1AP56279 114 aa15.91■□□□□ 0.14
SFSWAP-203ENST00000535236 ERVS71-1P61550 626 aa15.91■□□□□ 0.14
SFSWAP-203ENST00000535236 AESQ08117 197 aa15.91■□□□□ 0.14
SFSWAP-203ENST00000535236 PIGYQ3MUY2 71 aa15.91■□□□□ 0.14
SFSWAP-203ENST00000535236 PMS2CLQ68D20 193 aa15.91■□□□□ 0.14
SFSWAP-203ENST00000535236 ACAA2P42765 397 aaKnown RBP15.91■□□□□ 0.14
SFSWAP-203ENST00000535236 RPL31P62899 125 aaKnown RBP15.91■□□□□ 0.14
SFSWAP-203ENST00000535236 Q9N2K0 584 aa15.91■□□□□ 0.14
SFSWAP-203ENST00000535236 LOXL3P58215 753 aa15.9■□□□□ 0.14
SFSWAP-203ENST00000535236 BSXQ3C1V8 233 aa15.9■□□□□ 0.14
SFSWAP-203ENST00000535236 FAM24BQ8N5W8 94 aa15.9■□□□□ 0.14
SFSWAP-203ENST00000535236 OR10G8Q8NGN5 311 aa15.9■□□□□ 0.14
SFSWAP-203ENST00000535236 MRPL37Q9BZE1 423 aaKnown RBP15.9■□□□□ 0.14
SFSWAP-203ENST00000535236 KIR2DL2P43627 348 aaPredicted RBP15.9■□□□□ 0.14
SFSWAP-203ENST00000535236 PMS2P11Q13670 270 aa15.9■□□□□ 0.14
SFSWAP-203ENST00000535236 IZUMO4Q1ZYL8 232 aa15.9■□□□□ 0.14
SFSWAP-203ENST00000535236 CROCCQ5TZA2 2017 aa15.9■□□□□ 0.14
SFSWAP-203ENST00000535236 ZNF552Q9H707 407 aaPredicted RBP15.9■□□□□ 0.14
SFSWAP-203ENST00000535236 MYO7AQ13402 2215 aa15.9■□□□□ 0.14
SFSWAP-203ENST00000535236 MELTFP08582 738 aa15.9■□□□□ 0.14
SFSWAP-203ENST00000535236 HOXD4P09016 255 aaPredicted RBP15.9■□□□□ 0.14
SFSWAP-203ENST00000535236 ERVFRD-1P60508 538 aa15.9■□□□□ 0.14
SFSWAP-203ENST00000535236 GGTLC2Q14390 218 aa15.9■□□□□ 0.14
SFSWAP-203ENST00000535236 SLC25A42Q86VD7 318 aa15.9■□□□□ 0.14
SFSWAP-203ENST00000535236 RHBDL1O75783 438 aa15.9■□□□□ 0.14
SFSWAP-203ENST00000535236 COL10A1Q03692 680 aa15.9■□□□□ 0.14
SFSWAP-203ENST00000535236 KRTCAP3Q53RY4 240 aa15.9■□□□□ 0.14
SFSWAP-203ENST00000535236 SCGB1D4Q6XE38 83 aa15.9■□□□□ 0.14
SFSWAP-203ENST00000535236 WIPI2Q9Y4P8 454 aa15.9■□□□□ 0.14
SFSWAP-203ENST00000535236 RPL36A-HNRNPH2H7BZ11 118 aa15.89■□□□□ 0.14
SFSWAP-203ENST00000535236 GABRA6Q16445 453 aa15.89■□□□□ 0.14
SFSWAP-203ENST00000535236 SLC35E4Q6ICL7 350 aa15.89■□□□□ 0.14
SFSWAP-203ENST00000535236 OR2J1Q9GZK6 312 aa15.89■□□□□ 0.14
SFSWAP-203ENST00000535236 ATXN7O15265 892 aaPredicted RBP15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 REG1BP48304 166 aa15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 KHDC3LQ587J8 217 aa15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 Q6ZN92 141 aa15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 MRGPRFQ96AM1 343 aa15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 PAPPAQ13219 1627 aa15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 TRAV39A0A0B4J263 110 aa15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 TMPRSS3P57727 454 aa15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 TEX30Q5JUR7 227 aa15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 ZAR1Q86SH2 424 aa15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 ANGPTL6Q8NI99 470 aa15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 RNF133Q8WVZ7 376 aa15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 SNRNP40Q96DI7 357 aaKnown RBP15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 ABHD1Q96SE0 405 aa15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 SF3B6Q9Y3B4 125 aaKnown RBP15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 TNRC6CQ9HCJ0 1690 aaKnown RBP15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 MFSD2BA6NFX1 497 aa15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 FFAR1O14842 300 aa15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 CTDSPLO15194 276 aa15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 FTH1P19P0C7X4 201 aa15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 C1orf174Q8IYL3 243 aa15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 STXBP6Q8NFX7 210 aa15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 LPAR5Q9H1C0 372 aa15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 TRAV34A0A0B4J273 112 aa15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 A0A1W2PPV9 198 aa15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 FAM157CP0CG43 387 aa15.89■□□□□ 0.13
SFSWAP-203ENST00000535236 ZNF721Q8TF20 911 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms