RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 VSIG8P0DPA2 414 aa16.59■□□□□ 0.25
CCS-208ENST00000533244 GALP22466 123 aa16.59■□□□□ 0.25
CCS-208ENST00000533244 CALRP27797 417 aaKnown RBP16.59■□□□□ 0.25
CCS-208ENST00000533244 CD34P28906 385 aa16.59■□□□□ 0.25
CCS-208ENST00000533244 GDNFP39905 211 aa16.59■□□□□ 0.25
CCS-208ENST00000533244 RPL15P61313 204 aaKnown RBP16.59■□□□□ 0.25
CCS-208ENST00000533244 AANATQ16613 207 aa16.59■□□□□ 0.25
CCS-208ENST00000533244 LHFPL4Q7Z7J7 247 aa16.59■□□□□ 0.25
CCS-208ENST00000533244 OR6M1Q8NGM8 313 aa16.59■□□□□ 0.25
CCS-208ENST00000533244 DYRK2Q92630 601 aa16.59■□□□□ 0.25
CCS-208ENST00000533244 SELENOIQ9C0D9 397 aa16.59■□□□□ 0.25
CCS-208ENST00000533244 CST11Q9H112 138 aa16.59■□□□□ 0.25
CCS-208ENST00000533244 TNFRSF19Q9NS68 423 aa16.59■□□□□ 0.25
CCS-208ENST00000533244 A0A087X0M5 115 aa16.58■□□□□ 0.24
CCS-208ENST00000533244 KBTBD11-OT1A0A1B0GTJ5 212 aa16.58■□□□□ 0.24
CCS-208ENST00000533244 A0A1B0GX30 115 aa16.58■□□□□ 0.24
CCS-208ENST00000533244 FAM181BA6NEQ2 426 aa16.58■□□□□ 0.24
CCS-208ENST00000533244 CCRL2O00421 344 aa16.58■□□□□ 0.24
CCS-208ENST00000533244 ARG1P05089 322 aa16.58■□□□□ 0.24
CCS-208ENST00000533244 HTR2CP28335 458 aa16.58■□□□□ 0.24
CCS-208ENST00000533244 GLP1RP43220 463 aa16.58■□□□□ 0.24
CCS-208ENST00000533244 LGALS4P56470 323 aa16.58■□□□□ 0.24
CCS-208ENST00000533244 QRFPP83859 136 aa16.58■□□□□ 0.24
CCS-208ENST00000533244 ATAD3CQ5T2N8 411 aa16.58■□□□□ 0.24
CCS-208ENST00000533244 SIGIRRQ6IA17 410 aa16.58■□□□□ 0.24
CCS-208ENST00000533244 OR52W1Q6IF63 320 aa16.58■□□□□ 0.24
CCS-208ENST00000533244 BAIAP2L2Q6UXY1 529 aa16.58■□□□□ 0.24
CCS-208ENST00000533244 ZNF565Q8N9K5 539 aa16.58■□□□□ 0.24
CCS-208ENST00000533244 OR5R1Q8NH85 324 aa16.58■□□□□ 0.24
CCS-208ENST00000533244 CLEC7AQ9BXN2 247 aa16.58■□□□□ 0.24
CCS-208ENST00000533244 TRDV1A0A1B0GX56 115 aa16.57■□□□□ 0.24
CCS-208ENST00000533244 NPIPB11E5RHQ5 1161 aa16.57■□□□□ 0.24
CCS-208ENST00000533244 SLC17A2O00624 439 aa16.57■□□□□ 0.24
CCS-208ENST00000533244 GPR137BO60478 399 aa16.57■□□□□ 0.24
CCS-208ENST00000533244 OMGP23515 440 aa16.57■□□□□ 0.24
CCS-208ENST00000533244 FOXL1Q12952 345 aa16.57■□□□□ 0.24
CCS-208ENST00000533244 AWAT1Q58HT5 328 aa16.57■□□□□ 0.24
CCS-208ENST00000533244 ZNF497Q6ZNH5 498 aa16.57■□□□□ 0.24
CCS-208ENST00000533244 GAPTQ8N292 157 aa16.57■□□□□ 0.24
CCS-208ENST00000533244 FAM46BQ96A09 425 aa16.57■□□□□ 0.24
CCS-208ENST00000533244 CALYQ9NYX4 217 aa16.57■□□□□ 0.24
CCS-208ENST00000533244 VPREB3Q9UKI3 123 aa16.57■□□□□ 0.24
CCS-208ENST00000533244 AK6Q9Y3D8 172 aaKnown RBP16.57■□□□□ 0.24
CCS-208ENST00000533244 TMEM30CPA0ZSE6 113 aa16.56■□□□□ 0.24
CCS-208ENST00000533244 TMEM14DPA8MWL7 114 aa16.56■□□□□ 0.24
CCS-208ENST00000533244 BPNT1O95861 308 aa16.56■□□□□ 0.24
CCS-208ENST00000533244 IL1AP01583 271 aa16.56■□□□□ 0.24
CCS-208ENST00000533244 GLAP06280 429 aa16.56■□□□□ 0.24
CCS-208ENST00000533244 PSMB9P28065 219 aa16.56■□□□□ 0.24
CCS-208ENST00000533244 UNC119Q13432 240 aa16.56■□□□□ 0.24
CCS-208ENST00000533244 MINOS1Q5TGZ0 78 aa16.56■□□□□ 0.24
CCS-208ENST00000533244 OR10K2Q6IF99 312 aa16.56■□□□□ 0.24
CCS-208ENST00000533244 RAB12Q6IQ22 244 aa16.56■□□□□ 0.24
CCS-208ENST00000533244 BRICD5Q6PL45 260 aa16.56■□□□□ 0.24
CCS-208ENST00000533244 C12orf54Q6X4T0 127 aa16.56■□□□□ 0.24
CCS-208ENST00000533244 RTN4RL2Q86UN3 420 aa16.56■□□□□ 0.24
CCS-208ENST00000533244 DYNAPQ8N1N2 210 aa16.56■□□□□ 0.24
CCS-208ENST00000533244 MALSU1Q96EH3 234 aa16.56■□□□□ 0.24
CCS-208ENST00000533244 KIRREL1Q96J84 757 aa16.56■□□□□ 0.24
CCS-208ENST00000533244 MINOS1-NBL1R4GNA1 71 aa16.56■□□□□ 0.24
CCS-208ENST00000533244 TRAV1-2A0A0B4J238 106 aa16.55■□□□□ 0.24
CCS-208ENST00000533244 SHISA3A0PJX4 238 aa16.55■□□□□ 0.24
CCS-208ENST00000533244 VGLL3A8MV65 326 aa16.55■□□□□ 0.24
CCS-208ENST00000533244 MPIG6BO95866 241 aa16.55■□□□□ 0.24
CCS-208ENST00000533244 IGLV1-47P01700 117 aa16.55■□□□□ 0.24
CCS-208ENST00000533244 PAX6P26367 422 aa16.55■□□□□ 0.24
CCS-208ENST00000533244 RPS27AP62979 156 aaKnown RBP16.55■□□□□ 0.24
CCS-208ENST00000533244 DYNC1I2Q13409 638 aaKnown RBP16.55■□□□□ 0.24
CCS-208ENST00000533244 RBM39Q14498 530 aaKnown RBP16.55■□□□□ 0.24
CCS-208ENST00000533244 LRRC75BQ2VPJ9 315 aa16.55■□□□□ 0.24
CCS-208ENST00000533244 ABHD12Q8N2K0 398 aa16.55■□□□□ 0.24
CCS-208ENST00000533244 OR4P4Q8NGL7 312 aa16.55■□□□□ 0.24
CCS-208ENST00000533244 KCNG3Q8TAE7 436 aa16.55■□□□□ 0.24
CCS-208ENST00000533244 MRGPRDQ8TDS7 321 aa16.55■□□□□ 0.24
CCS-208ENST00000533244 TAF15Q92804 592 aaKnown RBP eCLIP16.55■□□□□ 0.24
CCS-208ENST00000533244 SSX3Q99909 188 aa16.55■□□□□ 0.24
CCS-208ENST00000533244 TM2D1Q9BX74 207 aa16.55■□□□□ 0.24
CCS-208ENST00000533244 KCNK15Q9H427 330 aa16.55■□□□□ 0.24
CCS-208ENST00000533244 ZNF286AQ9HBT8 521 aa16.55■□□□□ 0.24
CCS-208ENST00000533244 C1RLQ9NZP8 487 aa16.55■□□□□ 0.24
CCS-208ENST00000533244 BTBD17A6NE02 478 aa16.54■□□□□ 0.24
CCS-208ENST00000533244 MCRIP1C9JLW8 97 aa16.54■□□□□ 0.24
CCS-208ENST00000533244 H3BUI4 141 aa16.54■□□□□ 0.24
CCS-208ENST00000533244 H3BUX3 64 aa16.54■□□□□ 0.24
CCS-208ENST00000533244 RRP9O43818 475 aaKnown RBP16.54■□□□□ 0.24
CCS-208ENST00000533244 PDCD6O75340 191 aa16.54■□□□□ 0.24
CCS-208ENST00000533244 MT-ND4P03905 459 aa16.54■□□□□ 0.24
CCS-208ENST00000533244 FUT3P21217 361 aa16.54■□□□□ 0.24
CCS-208ENST00000533244 RELBQ01201 579 aa16.54■□□□□ 0.24
CCS-208ENST00000533244 GDPGP1Q6ZNW5 385 aa16.54■□□□□ 0.24
CCS-208ENST00000533244 OR10A7Q8NGE5 316 aa16.54■□□□□ 0.24
CCS-208ENST00000533244 PIFOQ8TCI5 191 aa16.54■□□□□ 0.24
CCS-208ENST00000533244 TMEM59Q9BXS4 323 aa16.54■□□□□ 0.24
CCS-208ENST00000533244 PEX16Q9Y5Y5 336 aa16.54■□□□□ 0.24
CCS-208ENST00000533244 TRAV39A0A0B4J263 110 aa16.53■□□□□ 0.24
CCS-208ENST00000533244 CA11O75493 328 aa16.53■□□□□ 0.24
CCS-208ENST00000533244 NDUFA7O95182 113 aa16.53■□□□□ 0.24
CCS-208ENST00000533244 GZMHP20718 246 aa16.53■□□□□ 0.24
CCS-208ENST00000533244 CFPP27918 469 aa16.53■□□□□ 0.24
CCS-208ENST00000533244 SSTR5P35346 364 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms