RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 ZNF587BE7ETH6 402 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 H0YIZ8 118 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 ANGPTL7O43827 346 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 PLATP00750 562 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 IFNA6P05013 189 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 CHRM2P08172 466 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 GSTP1P09211 210 aaKnown RBP6.94□□□□□ -1.3
NEDD8-207ENST00000533242 B4GALT1P15291 398 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 HLA-GP17693 338 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 C4BPBP20851 252 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 GSK3AP49840 483 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 ECH1Q13011 328 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 SLC9A3R2Q15599 337 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 ANKRD55Q3KP44 614 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 PDLIM3Q53GG5 364 aaPredicted RBP6.94□□□□□ -1.3
NEDD8-207ENST00000533242 ZNF774Q6NX45 483 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 HDDC2Q7Z4H3 204 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 C6orf201Q7Z4U5 140 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 SLC51BQ86UW2 128 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 C20orf196Q8IYI0 205 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 KCNRGQ8N5I3 272 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 OR51T1Q8NGJ9 327 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 TERB2Q8NHR7 220 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 TMEM186Q96B77 213 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 RRNAD1Q96FB5 475 aaKnown RBP6.94□□□□□ -1.3
NEDD8-207ENST00000533242 RTBDNQ9BSG5 229 aaPredicted RBP6.94□□□□□ -1.3
NEDD8-207ENST00000533242 CHST5Q9GZS9 411 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 OR10A2Q9H208 303 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 CRLF2Q9HC73 371 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 DYNLRB1Q9NP97 96 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 GPR173Q9NS66 373 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 GPR132Q9UNW8 380 aa6.94□□□□□ -1.3
NEDD8-207ENST00000533242 A0A0U1RQV5 110 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 C13orf42A0A1B0GVH6 325 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 DUS4LO95620 317 aaKnown RBP6.93□□□□□ -1.3
NEDD8-207ENST00000533242 FGF2P09038 288 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 RPS2P15880 293 aaKnown RBP6.93□□□□□ -1.3
NEDD8-207ENST00000533242 GLRA1P23415 457 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 BLVRBP30043 206 aaPredicted RBP6.93□□□□□ -1.3
NEDD8-207ENST00000533242 ARFRP1Q13795 201 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 VAX1Q5SQQ9 334 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 BOLLQ8N9W6 283 aaKnown RBP6.93□□□□□ -1.3
NEDD8-207ENST00000533242 AKR7LQ8NHP1 331 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 PHB2Q99623 299 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 OCSTAMPQ9BR26 566 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 RNF126Q9BV68 326 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 MSGN1A6NI15 193 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 DHRS7CA6NNS2 312 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 SYNGR3O43761 229 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 IGKV3-15P01624 115 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 MSMBP08118 114 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 SLC25A4P12235 298 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 CBR1P16152 277 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 SNU13P55769 128 aaKnown RBP6.93□□□□□ -1.3
NEDD8-207ENST00000533242 AWAT1Q58HT5 328 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 UNQ6126/PRO20091Q6UXV3 157 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 LHFPL1Q86WI0 220 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 ZCCHC24Q8N2G6 241 aaKnown RBP6.93□□□□□ -1.3
NEDD8-207ENST00000533242 OR56B1Q8NGI3 324 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 OR51F2Q8NH61 342 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 CLDND2Q8NHS1 167 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 DYRK2Q92630 601 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 PECRQ9BY49 303 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 LINC00470Q9BZP3 86 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 HIF1ANQ9NWT6 349 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 NUP50Q9UKX7 468 aa6.93□□□□□ -1.3
NEDD8-207ENST00000533242 TRAV20A0A0B4J274 112 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 CEACAM18A8MTB9 384 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 AMY2BP19961 511 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 EPHA1P21709 976 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 ZP3P21754 424 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 GABRR1P24046 479 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 ALDH3B1P43353 468 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 GPR6P46095 362 aaPredicted RBP6.92□□□□□ -1.3
NEDD8-207ENST00000533242 MRPS34P82930 218 aaKnown RBP6.92□□□□□ -1.3
NEDD8-207ENST00000533242 ZMYND11Q15326 602 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 PXDC1Q5TGL8 231 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 FAM27BQ5VT28 67 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 LPCAT3Q6P1A2 487 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 BRICD5Q6PL45 260 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 ATRAIDQ6UW56 229 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 Q6ZSR3 168 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 SLC16A14Q7RTX9 510 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 PNLDC1Q8NA58 520 aaKnown RBP6.92□□□□□ -1.3
NEDD8-207ENST00000533242 ZSCAN4Q8NAM6 433 aaPredicted RBP6.92□□□□□ -1.3
NEDD8-207ENST00000533242 BVESQ8NE79 360 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 ASB13Q8WXK3 278 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 OR10C1Q96KK4 312 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 ZNF747Q9BV97 191 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 ZNF471Q9BX82 626 aaPredicted RBP6.92□□□□□ -1.3
NEDD8-207ENST00000533242 SUCNR1Q9BXA5 334 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 ELL3Q9HB65 397 aaPredicted RBP6.92□□□□□ -1.3
NEDD8-207ENST00000533242 MED9Q9NWA0 146 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 RASL12Q9NYN1 266 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 IGHV2OR16-5A0A0B4J2B6 119 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 IGKV1-12A0A0C4DH73 117 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 C5orf51A6NDU8 294 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 C3orf80F5H4A9 247 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 LYNX1G3V0Z9 82 aa6.92□□□□□ -1.3
NEDD8-207ENST00000533242 BCL2L11O43521 198 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms