RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 STARD10Q9Y365 291 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 WIPI2Q9Y4P8 454 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 C4orf51C9J302 202 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 SMIM17P0DL12 118 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 ETV3LQ6ZN32 361 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 GVQW1Q8N7I0 195 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 RNF133Q8WVZ7 376 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 ITLN1Q8WWA0 313 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 ZNRF4Q8WWF5 429 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 GPR27Q9NS67 375 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 MSRB2Q9Y3D2 182 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 CTSDP07339 412 aaPredicted RBP9.84□□□□□ -0.83
PTPRK-221ENST00000532331 TAGLNQ01995 201 aaKnown RBP9.84□□□□□ -0.83
PTPRK-221ENST00000532331 FABP9Q0Z7S8 132 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 PJVKQ0ZLH3 352 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 MRPL14Q6P1L8 145 aaKnown RBP9.84□□□□□ -0.83
PTPRK-221ENST00000532331 SLC26A10Q8NG04 563 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 BCL2L2Q92843 193 aaPredicted RBP9.84□□□□□ -0.83
PTPRK-221ENST00000532331 ANXA10Q9UJ72 324 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 NEUROG3Q9Y4Z2 214 aa9.84□□□□□ -0.83
PTPRK-221ENST00000532331 THSD7BQ9C0I4 1608 aa9.83□□□□□ -0.84
PTPRK-221ENST00000532331 CLDN14O95500 239 aa9.83□□□□□ -0.84
PTPRK-221ENST00000532331 NTF3P20783 257 aa9.83□□□□□ -0.84
PTPRK-221ENST00000532331 S100A4P26447 101 aaKnown RBP9.83□□□□□ -0.84
PTPRK-221ENST00000532331 RAB32Q13637 225 aa9.83□□□□□ -0.84
PTPRK-221ENST00000532331 OR5C1Q8NGR4 320 aa9.83□□□□□ -0.84
PTPRK-221ENST00000532331 OR10AC1Q8NH08 325 aa9.83□□□□□ -0.84
PTPRK-221ENST00000532331 ZNF596Q8TC21 504 aa9.83□□□□□ -0.84
PTPRK-221ENST00000532331 MS4A3Q96HJ5 214 aa9.83□□□□□ -0.84
PTPRK-221ENST00000532331 ABCA7Q8IZY2 2146 aa9.83□□□□□ -0.84
PTPRK-221ENST00000532331 CTDSPLO15194 276 aa9.83□□□□□ -0.84
PTPRK-221ENST00000532331 SLC31A2O15432 143 aa9.83□□□□□ -0.84
PTPRK-221ENST00000532331 SURF2Q15527 256 aaPredicted RBP9.83□□□□□ -0.84
PTPRK-221ENST00000532331 TMUB1Q9BVT8 246 aa9.83□□□□□ -0.84
PTPRK-221ENST00000532331 SRXN1Q9BYN0 137 aa9.83□□□□□ -0.84
PTPRK-221ENST00000532331 SLC45A2Q9UMX9 530 aa9.83□□□□□ -0.84
PTPRK-221ENST00000532331 MYOFQ9NZM1 2061 aa9.83□□□□□ -0.84
PTPRK-221ENST00000532331 OR4C45A6NMZ5 311 aa9.83□□□□□ -0.84
PTPRK-221ENST00000532331 NDUFA2O43678 99 aa9.83□□□□□ -0.84
PTPRK-221ENST00000532331 SYNGR3O43761 229 aa9.83□□□□□ -0.84
PTPRK-221ENST00000532331 FAM3AP98173 230 aa9.83□□□□□ -0.84
PTPRK-221ENST00000532331 TEX261Q6UWH6 196 aa9.83□□□□□ -0.84
PTPRK-221ENST00000532331 U3KQ87 197 aa9.83□□□□□ -0.84
PTPRK-221ENST00000532331 ERVFC1-1P60608 527 aa9.83□□□□□ -0.84
PTPRK-221ENST00000532331 CCL13Q99616 98 aa9.83□□□□□ -0.84
PTPRK-221ENST00000532331 DHRS9Q9BPW9 319 aa9.83□□□□□ -0.84
PTPRK-221ENST00000532331 ZNF320A2RRD8 509 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 GEMIN2O14893 280 aaKnown RBP9.82□□□□□ -0.84
PTPRK-221ENST00000532331 GSTZ1O43708 216 aaPredicted RBP9.82□□□□□ -0.84
PTPRK-221ENST00000532331 APOBEC3AP31941 199 aaPredicted RBP9.82□□□□□ -0.84
PTPRK-221ENST00000532331 RPS4XP62701 263 aaKnown RBP9.82□□□□□ -0.84
PTPRK-221ENST00000532331 ATP6V1FQ16864 119 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 MPV17LQ2QL34 196 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 ABHD1Q96SE0 405 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 MIOXQ9UGB7 285 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 PCDHGA9Q9Y5G4 932 aaKnown RBP9.82□□□□□ -0.84
PTPRK-221ENST00000532331 IGKV3-11P04433 115 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 NAT2P11245 290 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 PRDX2P32119 198 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 C10orf111Q8N326 155 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 OR2C3Q8N628 320 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 APCDD1LQ8NCL9 501 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 RPS4Y2Q8TD47 263 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 RSRP1Q9BUV0 290 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 KCNK15Q9H427 330 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 GP6Q9HCN6 339 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 A0A1W2PPQ1 181 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 SOCS1O15524 211 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 B3GALNT1O75752 331 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 UMODP07911 640 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 ASAH2BP0C7U1 165 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 SIGLECL1Q8N7X8 197 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 OR52L2PQ8NGH6 319 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 OR5R1Q8NH85 324 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 DYNLRB2Q8TF09 96 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 MPC2O95563 127 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 RFPL3SP0C7P2 107 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 SLC35B1P78383 322 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 FAM27E3Q08E93 113 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 PRSS54Q6PEW0 395 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 LIAT1Q6ZQX7 453 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 Q6ZT83 130 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 TMEM208Q9BTX3 173 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 WDR61Q9GZS3 305 aaKnown RBP9.82□□□□□ -0.84
PTPRK-221ENST00000532331 PLSCR3Q9NRY6 295 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 FAM24AA6NFZ4 105 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 RNASEK-C17orf49H0YIS7 233 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 CELA3AP09093 270 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 PGA4P0DJD7 388 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 GZMMP51124 257 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 MIDNQ504T8 468 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 FNDC7Q5VTL7 733 aa9.82□□□□□ -0.84
PTPRK-221ENST00000532331 RECKO95980 971 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 NHLH1Q02575 133 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 COL10A1Q03692 680 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 TIMM23BQ5SRD1 257 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 UQCC3Q6UW78 93 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 ZNF788Q6ZQV5 615 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 TBC1D26Q86UD7 250 aa9.81□□□□□ -0.84
PTPRK-221ENST00000532331 OR1L4Q8NGR5 311 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms