RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 SHANK1Q9Y566 2161 aa12.83□□□□□ -0.35
NXF1-213ENST00000532297 IGLV3-32A0A0A0MS00 114 aa12.83□□□□□ -0.36
NXF1-213ENST00000532297 CDS2O95674 445 aa12.83□□□□□ -0.36
NXF1-213ENST00000532297 RELQ04864 619 aaPredicted RBP12.83□□□□□ -0.36
NXF1-213ENST00000532297 KCNMB1Q16558 191 aa12.83□□□□□ -0.36
NXF1-213ENST00000532297 CXorf66Q5JRM2 361 aaPredicted RBP12.83□□□□□ -0.36
NXF1-213ENST00000532297 RAET1LQ5VY80 246 aa12.83□□□□□ -0.36
NXF1-213ENST00000532297 CCDC71LQ8N9Z2 235 aa12.83□□□□□ -0.36
NXF1-213ENST00000532297 OR10G4Q8NGN3 311 aa12.83□□□□□ -0.36
NXF1-213ENST00000532297 SPACA9Q96E40 222 aaPredicted RBP12.83□□□□□ -0.36
NXF1-213ENST00000532297 ANGPTL4Q9BY76 406 aa12.83□□□□□ -0.36
NXF1-213ENST00000532297 LRFN1Q9P244 771 aa12.83□□□□□ -0.36
NXF1-213ENST00000532297 CHCHD2Q9Y6H1 151 aaPredicted RBP12.83□□□□□ -0.36
NXF1-213ENST00000532297 LY6G6EA0A0G2JKS1 128 aa12.83□□□□□ -0.36
NXF1-213ENST00000532297 DHRS3O75911 302 aa12.83□□□□□ -0.36
NXF1-213ENST00000532297 NXPH3O95157 252 aa12.83□□□□□ -0.36
NXF1-213ENST00000532297 ENDOGQ14249 297 aaKnown RBP12.83□□□□□ -0.36
NXF1-213ENST00000532297 HIST3H3Q16695 136 aa12.83□□□□□ -0.36
NXF1-213ENST00000532297 PCED1AQ9H1Q7 454 aa12.83□□□□□ -0.36
NXF1-213ENST00000532297 GAB2Q9UQC2 676 aa12.83□□□□□ -0.36
NXF1-213ENST00000532297 U3KQA8 63 aa12.83□□□□□ -0.36
NXF1-213ENST00000532297 C3orf85A0A1B0GTC6 90 aa12.82□□□□□ -0.36
NXF1-213ENST00000532297 XKRY2A2RUG3 117 aa12.82□□□□□ -0.36
NXF1-213ENST00000532297 AQP7P3A6NL99 342 aa12.82□□□□□ -0.36
NXF1-213ENST00000532297 SFTPCP11686 197 aa12.82□□□□□ -0.36
NXF1-213ENST00000532297 MMP9P14780 707 aa12.82□□□□□ -0.36
NXF1-213ENST00000532297 DTYMKP23919 212 aa12.82□□□□□ -0.36
NXF1-213ENST00000532297 ZFP36L1Q07352 338 aaKnown RBP12.82□□□□□ -0.36
NXF1-213ENST00000532297 ZNF100Q8IYN0 542 aa12.82□□□□□ -0.36
NXF1-213ENST00000532297 PP6455Q8WZ26 134 aa12.82□□□□□ -0.36
NXF1-213ENST00000532297 SNHG12Q9BXW3 62 aa12.82□□□□□ -0.36
NXF1-213ENST00000532297 PPP1R14DQ9NXH3 145 aa12.82□□□□□ -0.36
NXF1-213ENST00000532297 RARRES3Q9UL19 164 aa12.82□□□□□ -0.36
NXF1-213ENST00000532297 TRDCB7Z8K6 153 aa12.82□□□□□ -0.36
NXF1-213ENST00000532297 GCGP01275 180 aa12.82□□□□□ -0.36
NXF1-213ENST00000532297 MTCP1P56278 107 aa12.82□□□□□ -0.36
NXF1-213ENST00000532297 HERV-K104P61576 105 aa12.82□□□□□ -0.36
NXF1-213ENST00000532297 ZNF154Q13106 437 aa12.82□□□□□ -0.36
NXF1-213ENST00000532297 EIF3IQ13347 325 aaKnown RBP12.82□□□□□ -0.36
NXF1-213ENST00000532297 MOB3AQ96BX8 217 aa12.82□□□□□ -0.36
NXF1-213ENST00000532297 HIST1H2AAQ96QV6 131 aa12.82□□□□□ -0.36
NXF1-213ENST00000532297 METTL9Q9H1A3 318 aa12.82□□□□□ -0.36
NXF1-213ENST00000532297 SDF2L1Q9HCN8 221 aa12.82□□□□□ -0.36
NXF1-213ENST00000532297 A0A0G2JMM0 328 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 A0A1W2PPB8 328 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 A0A1W2PRS3 328 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 KIR3DP1A8MWS1 328 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 TNFSF11O14788 317 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 NR2C1P13056 603 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 CLN3Q13286 438 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 ZNF468Q5VIY5 522 aaPredicted RBP12.81□□□□□ -0.36
NXF1-213ENST00000532297 ZNF695Q8IW36 515 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 ODF3L1Q8IXM7 274 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 PHF7Q9BWX1 381 aaPredicted RBP12.81□□□□□ -0.36
NXF1-213ENST00000532297 URB1O60287 2271 aaKnown RBP12.81□□□□□ -0.36
NXF1-213ENST00000532297 CD55P08174 381 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 MSR1P21757 451 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 AADACP22760 399 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 TUBG1P23258 451 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 WDR25Q64LD2 544 aaPredicted RBP12.81□□□□□ -0.36
NXF1-213ENST00000532297 ABLIM2Q6H8Q1 611 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 GJC3Q8NFK1 279 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 SRD5A3Q9H8P0 318 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 PLEK2Q9NYT0 353 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 UBE2J1Q9Y385 318 aaPredicted RBP12.81□□□□□ -0.36
NXF1-213ENST00000532297 V9GYS6 101 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 PRRC2CQ9Y520 2896 aaKnown RBP12.81□□□□□ -0.36
NXF1-213ENST00000532297 MPPED1O15442 326 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 ADAM20O43506 726 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 TMEM50AO95807 157 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 BCL2P10415 239 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 CEACAM1P13688 526 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 HOXA6P31267 233 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 NTF4P34130 210 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 P2RY6Q15077 328 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 DPPA3Q6W0C5 159 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 THNSL2Q86YJ6 484 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 IL22RA1Q8N6P7 574 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 NECAP1Q8NC96 275 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 NABP1Q96AH0 204 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 ZNF665Q9H7R5 613 aa12.81□□□□□ -0.36
NXF1-213ENST00000532297 CISD1Q9NZ45 108 aaKnown RBP12.81□□□□□ -0.36
NXF1-213ENST00000532297 KIAA1549Q9HCM3 1950 aa12.8□□□□□ -0.36
NXF1-213ENST00000532297 FREM1Q5H8C1 2179 aa12.8□□□□□ -0.36
NXF1-213ENST00000532297 IGKV1-27A0A075B6S5 117 aa12.8□□□□□ -0.36
NXF1-213ENST00000532297 C3orf80F5H4A9 247 aa12.8□□□□□ -0.36
NXF1-213ENST00000532297 SOX15O60248 233 aa12.8□□□□□ -0.36
NXF1-213ENST00000532297 IGLV3-1P01715 115 aa12.8□□□□□ -0.36
NXF1-213ENST00000532297 CTSSP25774 331 aa12.8□□□□□ -0.36
NXF1-213ENST00000532297 TAS2R30P59541 319 aa12.8□□□□□ -0.36
NXF1-213ENST00000532297 SLC25A24Q6NUK1 477 aa12.8□□□□□ -0.36
NXF1-213ENST00000532297 SPIN2AQ99865 258 aa12.8□□□□□ -0.36
NXF1-213ENST00000532297 SPIN2BQ9BPZ2 258 aa12.8□□□□□ -0.36
NXF1-213ENST00000532297 SRXN1Q9BYN0 137 aa12.8□□□□□ -0.36
NXF1-213ENST00000532297 TMEM222Q9H0R3 208 aa12.8□□□□□ -0.36
NXF1-213ENST00000532297 WNT16Q9UBV4 365 aa12.8□□□□□ -0.36
NXF1-213ENST00000532297 MMP7P09237 267 aaPredicted RBP12.8□□□□□ -0.36
NXF1-213ENST00000532297 OR4A8P0C604 315 aa12.8□□□□□ -0.36
NXF1-213ENST00000532297 ZNF25P17030 456 aaPredicted RBP12.8□□□□□ -0.36
NXF1-213ENST00000532297 UCP3P55916 312 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms