RNA–Protein interactions for RNA: ENST00000530790.5

VPS28-211, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-211ENST00000530790 KCNAB3O43448 404 aa10.69□□□□□ -0.7
VPS28-211ENST00000530790 GPX5O75715 221 aa10.69□□□□□ -0.7
VPS28-211ENST00000530790 RPS11P62280 158 aaKnown RBP eCLIP10.69□□□□□ -0.7
VPS28-211ENST00000530790 DEFA6Q01524 100 aa10.69□□□□□ -0.7
VPS28-211ENST00000530790 MPV17LQ2QL34 196 aa10.69□□□□□ -0.7
VPS28-211ENST00000530790 SLC22A6Q4U2R8 563 aa10.69□□□□□ -0.7
VPS28-211ENST00000530790 TPTE2P1Q5T6R2 138 aa10.69□□□□□ -0.7
VPS28-211ENST00000530790 LAIR2Q6ISS4 152 aa10.69□□□□□ -0.7
VPS28-211ENST00000530790 CCDC144NLQ6NUI1 221 aa10.69□□□□□ -0.7
VPS28-211ENST00000530790 C16orf82Q7Z2V1 217 aa10.69□□□□□ -0.7
VPS28-211ENST00000530790 JAGN1Q8N5M9 183 aa10.69□□□□□ -0.7
VPS28-211ENST00000530790 SUMF2Q8NBJ7 301 aa10.69□□□□□ -0.7
VPS28-211ENST00000530790 OR9G1Q8NH87 305 aa10.69□□□□□ -0.7
VPS28-211ENST00000530790 FAM110DQ8TAY7 271 aaPredicted RBP10.69□□□□□ -0.7
VPS28-211ENST00000530790 PLPPR1Q8TBJ4 325 aa10.69□□□□□ -0.7
VPS28-211ENST00000530790 NEK7Q8TDX7 302 aa10.69□□□□□ -0.7
VPS28-211ENST00000530790 FBLIM1Q8WUP2 373 aa10.69□□□□□ -0.7
VPS28-211ENST00000530790 THRSPQ92748 146 aa10.69□□□□□ -0.7
VPS28-211ENST00000530790 MMP28Q9H239 520 aa10.69□□□□□ -0.7
VPS28-211ENST00000530790 DCLRE1BQ9H816 532 aa10.69□□□□□ -0.7
VPS28-211ENST00000530790 SERTAD4Q9NUC0 356 aa10.69□□□□□ -0.7
VPS28-211ENST00000530790 PLCXD1Q9NUJ7 323 aa10.69□□□□□ -0.7
VPS28-211ENST00000530790 IDI2-AS1Q9NZ38 188 aa10.69□□□□□ -0.7
VPS28-211ENST00000530790 TRBV5-7A0A0A0MS05 114 aa10.68□□□□□ -0.7
VPS28-211ENST00000530790 TMEM30CPA0ZSE6 113 aa10.68□□□□□ -0.7
VPS28-211ENST00000530790 OOSP1A8MZH6 123 aa10.68□□□□□ -0.7
VPS28-211ENST00000530790 GEMIN2O14893 280 aaKnown RBP10.68□□□□□ -0.7
VPS28-211ENST00000530790 FBXO24O75426 580 aa10.68□□□□□ -0.7
VPS28-211ENST00000530790 GTF2F2P13984 249 aa10.68□□□□□ -0.7
VPS28-211ENST00000530790 CELP19835 753 aa10.68□□□□□ -0.7
VPS28-211ENST00000530790 MAPK3P27361 379 aaPredicted RBP10.68□□□□□ -0.7
VPS28-211ENST00000530790 SSTR5P35346 364 aa10.68□□□□□ -0.7
VPS28-211ENST00000530790 MNDAP41218 407 aa10.68□□□□□ -0.7
VPS28-211ENST00000530790 VDAC2P45880 294 aaPredicted RBP10.68□□□□□ -0.7
VPS28-211ENST00000530790 GPR176Q14439 515 aa10.68□□□□□ -0.7
VPS28-211ENST00000530790 LTC4SQ16873 150 aa10.68□□□□□ -0.7
VPS28-211ENST00000530790 ATAD3CQ5T2N8 411 aa10.68□□□□□ -0.7
VPS28-211ENST00000530790 TFAP2CQ92754 450 aa10.68□□□□□ -0.7
VPS28-211ENST00000530790 TOMM40LQ969M1 308 aa10.68□□□□□ -0.7
VPS28-211ENST00000530790 MUL1Q969V5 352 aa10.68□□□□□ -0.7
VPS28-211ENST00000530790 RPEQ96AT9 228 aa10.68□□□□□ -0.7
VPS28-211ENST00000530790 DERL3Q96Q80 235 aa10.68□□□□□ -0.7
VPS28-211ENST00000530790 LIN7BQ9HAP6 207 aa10.68□□□□□ -0.7
VPS28-211ENST00000530790 ZNF581Q9P0T4 197 aa10.68□□□□□ -0.7
VPS28-211ENST00000530790 ERGIC3Q9Y282 383 aa10.68□□□□□ -0.7
VPS28-211ENST00000530790 MRPS28Q9Y2Q9 187 aaKnown RBP10.68□□□□□ -0.7
VPS28-211ENST00000530790 TET2Q6N021 2002 aaPredicted RBP10.68□□□□□ -0.7
VPS28-211ENST00000530790 A0A1W2PPK0 400 aa10.67□□□□□ -0.7
VPS28-211ENST00000530790 MAS1P04201 325 aa10.67□□□□□ -0.7
VPS28-211ENST00000530790 CD1AP06126 327 aa10.67□□□□□ -0.7
VPS28-211ENST00000530790 CGB3P0DN86 165 aa10.67□□□□□ -0.7
VPS28-211ENST00000530790 CGB7P0DN87 165 aa10.67□□□□□ -0.7
VPS28-211ENST00000530790 CD24P25063 80 aa10.67□□□□□ -0.7
VPS28-211ENST00000530790 GNG10P50151 68 aa10.67□□□□□ -0.7
VPS28-211ENST00000530790 BLCAPP62952 87 aa10.67□□□□□ -0.7
VPS28-211ENST00000530790 DOC2BQ14184 412 aa10.67□□□□□ -0.7
VPS28-211ENST00000530790 AWAT2Q6E213 333 aa10.67□□□□□ -0.7
VPS28-211ENST00000530790 NKAIN3Q8N8D7 197 aa10.67□□□□□ -0.7
VPS28-211ENST00000530790 OR10A7Q8NGE5 316 aa10.67□□□□□ -0.7
VPS28-211ENST00000530790 OR5M11Q96RB7 305 aa10.67□□□□□ -0.7
VPS28-211ENST00000530790 SLC25A33Q9BSK2 321 aa10.67□□□□□ -0.7
VPS28-211ENST00000530790 MND1Q9BWT6 205 aa10.67□□□□□ -0.7
VPS28-211ENST00000530790 LINC00574Q9H8X3 128 aa10.67□□□□□ -0.7
VPS28-211ENST00000530790 SPACA1Q9HBV2 294 aa10.67□□□□□ -0.7
VPS28-211ENST00000530790 FKBP14Q9NWM8 211 aa10.67□□□□□ -0.7
VPS28-211ENST00000530790 TRAV39A0A0B4J263 110 aa10.66□□□□□ -0.7
VPS28-211ENST00000530790 A0A1W2PP11 408 aa10.66□□□□□ -0.7
VPS28-211ENST00000530790 NPIPB11E5RHQ5 1161 aa10.66□□□□□ -0.7
VPS28-211ENST00000530790 LY6LH3BQJ8 138 aa10.66□□□□□ -0.7
VPS28-211ENST00000530790 J3QR06 171 aa10.66□□□□□ -0.7
VPS28-211ENST00000530790 OR2F2O95006 317 aa10.66□□□□□ -0.7
VPS28-211ENST00000530790 IGHV3-7P01780 117 aa10.66□□□□□ -0.7
VPS28-211ENST00000530790 MADCAM1Q13477 382 aa10.66□□□□□ -0.7
VPS28-211ENST00000530790 TMEM95Q3KNT9 176 aa10.66□□□□□ -0.7
VPS28-211ENST00000530790 UTF1Q5T230 341 aa10.66□□□□□ -0.7
VPS28-211ENST00000530790 HIST2H2BDQ6DRA6 164 aa10.66□□□□□ -0.7
VPS28-211ENST00000530790 GLIPR1L1Q6UWM5 242 aa10.66□□□□□ -0.7
VPS28-211ENST00000530790 CDH26Q8IXH8 852 aa10.66□□□□□ -0.7
VPS28-211ENST00000530790 NANOGP1Q8N7R0 232 aa10.66□□□□□ -0.7
VPS28-211ENST00000530790 RFESDQ8TAC1 157 aa10.66□□□□□ -0.7
VPS28-211ENST00000530790 LEAP2Q969E1 77 aa10.66□□□□□ -0.7
VPS28-211ENST00000530790 MRPS24Q96EL2 167 aaKnown RBP10.66□□□□□ -0.7
VPS28-211ENST00000530790 PSG11Q9UQ72 335 aa10.66□□□□□ -0.7
VPS28-211ENST00000530790 AIPO00170 330 aa10.65□□□□□ -0.7
VPS28-211ENST00000530790 CDK1P06493 297 aa10.65□□□□□ -0.7
VPS28-211ENST00000530790 CD28P10747 220 aa10.65□□□□□ -0.7
VPS28-211ENST00000530790 AQP4P55087 323 aa10.65□□□□□ -0.7
VPS28-211ENST00000530790 NSUN5P1Q3KNT7 163 aa10.65□□□□□ -0.7
VPS28-211ENST00000530790 Q6ZS46 218 aa10.65□□□□□ -0.7
VPS28-211ENST00000530790 SLC16A12Q6ZSM3 486 aa10.65□□□□□ -0.7
VPS28-211ENST00000530790 NDUFA11Q86Y39 141 aa10.65□□□□□ -0.7
VPS28-211ENST00000530790 OR10X1Q8NGY0 326 aa10.65□□□□□ -0.7
VPS28-211ENST00000530790 MYDGFQ969H8 173 aa10.65□□□□□ -0.7
VPS28-211ENST00000530790 RBM14Q96PK6 669 aaKnown RBP10.65□□□□□ -0.7
VPS28-211ENST00000530790 WNT10AQ9GZT5 417 aa10.65□□□□□ -0.7
VPS28-211ENST00000530790 SCN3BQ9NY72 215 aa10.65□□□□□ -0.7
VPS28-211ENST00000530790 RCC2Q9P258 522 aaKnown RBP10.65□□□□□ -0.7
VPS28-211ENST00000530790 NKX1-2Q9UD57 310 aaPredicted RBP10.65□□□□□ -0.7
VPS28-211ENST00000530790 WNK1Q9H4A3 2382 aa10.64□□□□□ -0.71
VPS28-211ENST00000530790 MCRIP1C9JLW8 97 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms