RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 OR6V1Q8N148 313 aa5.23□□□□□ -1.57
CSDE1-213ENST00000530784 UXS1Q8NBZ7 420 aa5.23□□□□□ -1.57
CSDE1-213ENST00000530784 SLC26A10Q8NG04 563 aa5.23□□□□□ -1.57
CSDE1-213ENST00000530784 FANK1Q8TC84 345 aa5.23□□□□□ -1.57
CSDE1-213ENST00000530784 SLCO4A1Q96BD0 722 aa5.23□□□□□ -1.57
CSDE1-213ENST00000530784 ERMAPQ96PL5 475 aaPredicted RBP5.23□□□□□ -1.57
CSDE1-213ENST00000530784 TBX15Q96SF7 602 aa5.23□□□□□ -1.57
CSDE1-213ENST00000530784 NMNAT3Q96T66 252 aa5.23□□□□□ -1.57
CSDE1-213ENST00000530784 VIPAS39Q9H9C1 493 aa5.23□□□□□ -1.57
CSDE1-213ENST00000530784 RPRD1BQ9NQG5 326 aaKnown RBP5.23□□□□□ -1.57
CSDE1-213ENST00000530784 GPR173Q9NS66 373 aa5.23□□□□□ -1.57
CSDE1-213ENST00000530784 FGFR1OP2Q9NVK5 253 aa5.23□□□□□ -1.57
CSDE1-213ENST00000530784 ARMCX1Q9P291 453 aa5.23□□□□□ -1.57
CSDE1-213ENST00000530784 B9D1Q9UPM9 204 aa5.23□□□□□ -1.57
CSDE1-213ENST00000530784 PKD1L1Q8TDX9 2849 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 TRAV38-1A0A0B4J264 116 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 A0A0U1RQK1 487 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 GGT3PA6NGU5 568 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 CD300LBA8K4G0 201 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 M0R135 149 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 NDUFAB1O14561 156 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 DYNC1I1O14576 645 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 ARPC3O15145 178 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 NDUFA2O43678 99 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 GMDSO60547 372 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 PTBP3O95758 552 aaKnown RBP5.22□□□□□ -1.57
CSDE1-213ENST00000530784 NCK1P16333 377 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 AZU1P20160 251 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 GGT2P36268 569 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 RSPO1Q2MKA7 263 aaPredicted RBP5.22□□□□□ -1.57
CSDE1-213ENST00000530784 RFX4Q33E94 735 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 LRRC37A5PQ49AS3 106 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 ASPHD2Q6ICH7 369 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 CGB2Q6NT52 195 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 NAA40Q86UY6 237 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 OR4K13Q8NH42 304 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 OR52J3Q8NH60 311 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 LINC01006Q8NI28 216 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 LHX4Q969G2 390 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 SPTSSAQ969W0 71 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 ZNF799Q96GE5 643 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 HOPXQ9BPY8 73 aaPredicted RBP5.22□□□□□ -1.57
CSDE1-213ENST00000530784 KCTD14Q9BQ13 255 aaPredicted RBP5.22□□□□□ -1.57
CSDE1-213ENST00000530784 NSRP1Q9H0G5 558 aaKnown RBP5.22□□□□□ -1.57
CSDE1-213ENST00000530784 SIRPDQ9H106 197 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 OR52D1Q9H346 318 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 ARGLU1Q9NWB6 273 aaPredicted RBP5.22□□□□□ -1.57
CSDE1-213ENST00000530784 C1orf123Q9NWV4 160 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 DNAJB9Q9UBS3 223 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 CYB5R1Q9UHQ9 305 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 GPR132Q9UNW8 380 aa5.22□□□□□ -1.57
CSDE1-213ENST00000530784 SAMD4AQ9UPU9 718 aaKnown RBP5.22□□□□□ -1.57
CSDE1-213ENST00000530784 A0A1B0GVI7 797 aa5.21□□□□□ -1.58
CSDE1-213ENST00000530784 BTBD17A6NE02 478 aa5.21□□□□□ -1.58
CSDE1-213ENST00000530784 CTDSPLO15194 276 aa5.21□□□□□ -1.58
CSDE1-213ENST00000530784 ST8SIA3O43173 380 aa5.21□□□□□ -1.58
CSDE1-213ENST00000530784 GMNNO75496 209 aa5.21□□□□□ -1.58
CSDE1-213ENST00000530784 CLPXO76031 633 aa5.21□□□□□ -1.58
CSDE1-213ENST00000530784 ECDO95905 644 aaPredicted RBP5.21□□□□□ -1.58
CSDE1-213ENST00000530784 GYPAP02724 150 aa5.21□□□□□ -1.58
CSDE1-213ENST00000530784 COX4I1P13073 169 aa5.21□□□□□ -1.58
CSDE1-213ENST00000530784 HIST1H1CP16403 213 aaKnown RBP5.21□□□□□ -1.58
CSDE1-213ENST00000530784 ZNF823P16415 610 aa5.21□□□□□ -1.58
CSDE1-213ENST00000530784 NUDT2P50583 147 aa5.21□□□□□ -1.58
CSDE1-213ENST00000530784 SMIM11AP58511 58 aa5.21□□□□□ -1.58
CSDE1-213ENST00000530784 ARF6P62330 175 aa5.21□□□□□ -1.58
CSDE1-213ENST00000530784 SPIBQ01892 262 aa5.21□□□□□ -1.58
CSDE1-213ENST00000530784 ZNF92Q03936 586 aa5.21□□□□□ -1.58
CSDE1-213ENST00000530784 TAF9Q16594 264 aa5.21□□□□□ -1.58
CSDE1-213ENST00000530784 GLYATL3Q5SZD4 288 aa5.21□□□□□ -1.58
CSDE1-213ENST00000530784 DRAM2Q6UX65 266 aa5.21□□□□□ -1.58
CSDE1-213ENST00000530784 PDZD9Q8IXQ8 264 aa5.21□□□□□ -1.58
CSDE1-213ENST00000530784 SPERTQ8NA61 448 aa5.21□□□□□ -1.58
CSDE1-213ENST00000530784 SDR9C7Q8NEX9 313 aa5.21□□□□□ -1.58
CSDE1-213ENST00000530784 PROKR2Q8NFJ6 384 aa5.21□□□□□ -1.58
CSDE1-213ENST00000530784 OR2AE1Q8NHA4 323 aa5.21□□□□□ -1.58
CSDE1-213ENST00000530784 C11orf52Q96A22 123 aa5.21□□□□□ -1.58
CSDE1-213ENST00000530784 EFCAB1Q9HAE3 211 aa5.21□□□□□ -1.58
CSDE1-213ENST00000530784 RAB9BQ9NP90 201 aa5.21□□□□□ -1.58
CSDE1-213ENST00000530784 RPUSD1Q9UJJ7 312 aaKnown RBP5.21□□□□□ -1.58
CSDE1-213ENST00000530784 CAB39Q9Y376 341 aaPredicted RBP5.21□□□□□ -1.58
CSDE1-213ENST00000530784 KPTNQ9Y664 436 aa5.21□□□□□ -1.58
CSDE1-213ENST00000530784 IGHV3OR15-7A0A075B7D8 119 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 ANKRD30BLA7E2S9 258 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 BHLHE40O14503 412 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 PHOX2AO14813 284 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 SIGLEC5O15389 551 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 TNFSF12O43508 249 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 OR10H3O60404 316 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 CCDC22O60826 627 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 DIRAS1O95057 198 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 GADD45GO95257 159 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 FBP1P09467 338 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 OTX1P32242 354 aaPredicted RBP5.2□□□□□ -1.58
CSDE1-213ENST00000530784 IFNGR2P38484 337 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 RPS27P42677 84 aaKnown RBP5.2□□□□□ -1.58
CSDE1-213ENST00000530784 TEX36Q5VZQ5 186 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 GLYATQ6IB77 296 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 HACD2Q6Y1H2 254 aa5.2□□□□□ -1.58
CSDE1-213ENST00000530784 ZNF826PQ6ZT77 177 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms