RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 ATG5Q9H1Y0 275 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 ETAA1Q9NY74 926 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 ABRACLQ9P1F3 81 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 LPAR3Q9UBY5 353 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 ETV7Q9Y603 341 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 KPTNQ9Y664 436 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 LINC00312Q9Y6C7 94 aa11.51□□□□□ -0.57
USF1-209ENST00000529476 ANK3Q12955 4377 aaKnown RBP11.51□□□□□ -0.57
USF1-209ENST00000529476 MEIKINA0A087WXM9 373 aa11.5□□□□□ -0.57
USF1-209ENST00000529476 TRGV10A0A0A0MS01 117 aa11.5□□□□□ -0.57
USF1-209ENST00000529476 TRAV39A0A0B4J263 110 aa11.5□□□□□ -0.57
USF1-209ENST00000529476 TMEM30CPA0ZSE6 113 aa11.5□□□□□ -0.57
USF1-209ENST00000529476 METTL21EPA6NDL7 271 aa11.5□□□□□ -0.57
USF1-209ENST00000529476 RAB27BO00194 218 aa11.5□□□□□ -0.57
USF1-209ENST00000529476 TOX4O94842 621 aa11.5□□□□□ -0.57
USF1-209ENST00000529476 ZNF728P0DKX0 622 aa11.5□□□□□ -0.57
USF1-209ENST00000529476 DLX6P56179 175 aa11.5□□□□□ -0.57
USF1-209ENST00000529476 ERVFRD-1P60508 538 aa11.5□□□□□ -0.57
USF1-209ENST00000529476 PAX5Q02548 391 aa11.5□□□□□ -0.57
USF1-209ENST00000529476 PRB3Q04118 309 aaPredicted RBP11.5□□□□□ -0.57
USF1-209ENST00000529476 PLAC9Q5JTB6 97 aa11.5□□□□□ -0.57
USF1-209ENST00000529476 ZNF497Q6ZNH5 498 aa11.5□□□□□ -0.57
USF1-209ENST00000529476 VMO1Q7Z5L0 202 aa11.5□□□□□ -0.57
USF1-209ENST00000529476 TRAPPC6BQ86SZ2 158 aa11.5□□□□□ -0.57
USF1-209ENST00000529476 OR13A1Q8NGR1 328 aa11.5□□□□□ -0.57
USF1-209ENST00000529476 OR10R2Q8NGX6 335 aa11.5□□□□□ -0.57
USF1-209ENST00000529476 ARHGAP5-AS1Q96IT6 56 aa11.5□□□□□ -0.57
USF1-209ENST00000529476 PECRQ9BY49 303 aa11.5□□□□□ -0.57
USF1-209ENST00000529476 SIRT7Q9NRC8 400 aa11.5□□□□□ -0.57
USF1-209ENST00000529476 PLEKHJ1Q9NW61 149 aa11.5□□□□□ -0.57
USF1-209ENST00000529476 RHBDL2Q9NX52 303 aa11.5□□□□□ -0.57
USF1-209ENST00000529476 SPATA2Q9UM82 520 aa11.5□□□□□ -0.57
USF1-209ENST00000529476 A0A1W2PPH5 198 aa11.49□□□□□ -0.57
USF1-209ENST00000529476 M0R1W7 72 aa11.49□□□□□ -0.57
USF1-209ENST00000529476 MT-ND4P03905 459 aa11.49□□□□□ -0.57
USF1-209ENST00000529476 GLP1RP43220 463 aa11.49□□□□□ -0.57
USF1-209ENST00000529476 FAM189A2Q15884 450 aa11.49□□□□□ -0.57
USF1-209ENST00000529476 Q6ZTK2 550 aa11.49□□□□□ -0.57
USF1-209ENST00000529476 C11orf42Q8N5U0 333 aa11.49□□□□□ -0.57
USF1-209ENST00000529476 DYNC2LI1Q8TCX1 351 aa11.49□□□□□ -0.57
USF1-209ENST00000529476 CCDC107Q8WV48 283 aa11.49□□□□□ -0.57
USF1-209ENST00000529476 CORO2AQ92828 525 aa11.49□□□□□ -0.57
USF1-209ENST00000529476 UPRTQ96BW1 309 aa11.49□□□□□ -0.57
USF1-209ENST00000529476 KCTD12Q96CX2 325 aaKnown RBP11.49□□□□□ -0.57
USF1-209ENST00000529476 RAB3CQ96E17 227 aa11.49□□□□□ -0.57
USF1-209ENST00000529476 ZNF714Q96N38 554 aa11.49□□□□□ -0.57
USF1-209ENST00000529476 NCOR1P1Q9H4R4 102 aa11.49□□□□□ -0.57
USF1-209ENST00000529476 OR6C3Q9NZP0 311 aa11.49□□□□□ -0.57
USF1-209ENST00000529476 HSF4Q9ULV5 492 aa11.49□□□□□ -0.57
USF1-209ENST00000529476 UBE2J1Q9Y385 318 aaPredicted RBP11.49□□□□□ -0.57
USF1-209ENST00000529476 MXRA5Q9NR99 2828 aa11.49□□□□□ -0.57
USF1-209ENST00000529476 IGHV3OR16-10A0A075B7F0 116 aa11.48□□□□□ -0.57
USF1-209ENST00000529476 C17orf98A8MV24 154 aa11.48□□□□□ -0.57
USF1-209ENST00000529476 ZNF182P17025 639 aaPredicted RBP11.48□□□□□ -0.57
USF1-209ENST00000529476 HNF1AP20823 631 aa11.48□□□□□ -0.57
USF1-209ENST00000529476 KLF17Q5JT82 389 aaPredicted RBP11.48□□□□□ -0.57
USF1-209ENST00000529476 OLFML2AQ68BL7 652 aa11.48□□□□□ -0.57
USF1-209ENST00000529476 C1orf122Q6ZSJ8 110 aa11.48□□□□□ -0.57
USF1-209ENST00000529476 SAMD12Q8N8I0 201 aa11.48□□□□□ -0.57
USF1-209ENST00000529476 OR4K15Q8NH41 348 aa11.48□□□□□ -0.57
USF1-209ENST00000529476 MRGPRDQ8TDS7 321 aa11.48□□□□□ -0.57
USF1-209ENST00000529476 BEX2Q9BXY8 128 aa11.48□□□□□ -0.57
USF1-209ENST00000529476 METTL8Q9H825 291 aaKnown RBP11.48□□□□□ -0.57
USF1-209ENST00000529476 COMMD3Q9UBI1 195 aa11.48□□□□□ -0.57
USF1-209ENST00000529476 RSL24D1Q9UHA3 163 aaKnown RBP11.48□□□□□ -0.57
USF1-209ENST00000529476 AK3Q9UIJ7 227 aa11.48□□□□□ -0.57
USF1-209ENST00000529476 CDC42EP3Q9UKI2 254 aa11.48□□□□□ -0.57
USF1-209ENST00000529476 KCNK7Q9Y2U2 307 aa11.48□□□□□ -0.57
USF1-209ENST00000529476 A0A075B6Q4 140 aa11.47□□□□□ -0.57
USF1-209ENST00000529476 TRAV40A0A0B4J280 105 aa11.47□□□□□ -0.57
USF1-209ENST00000529476 DPPA5A6NC42 116 aa11.47□□□□□ -0.57
USF1-209ENST00000529476 MFNGO00587 321 aa11.47□□□□□ -0.57
USF1-209ENST00000529476 CA11O75493 328 aa11.47□□□□□ -0.57
USF1-209ENST00000529476 MMP23AO75900 390 aa11.47□□□□□ -0.57
USF1-209ENST00000529476 FSHBP01225 129 aa11.47□□□□□ -0.57
USF1-209ENST00000529476 CGB3P0DN86 165 aa11.47□□□□□ -0.57
USF1-209ENST00000529476 CGB7P0DN87 165 aa11.47□□□□□ -0.57
USF1-209ENST00000529476 IGHV4-38-2P0DP08 117 aa11.47□□□□□ -0.57
USF1-209ENST00000529476 GNB3P16520 340 aa11.47□□□□□ -0.57
USF1-209ENST00000529476 PRTN3P24158 256 aa11.47□□□□□ -0.57
USF1-209ENST00000529476 SRP14P37108 136 aaKnown RBP11.47□□□□□ -0.57
USF1-209ENST00000529476 KLRD1Q13241 179 aa11.47□□□□□ -0.57
USF1-209ENST00000529476 C17orf58Q2M2W7 97 aa11.47□□□□□ -0.57
USF1-209ENST00000529476 UBE2NLQ5JXB2 153 aa11.47□□□□□ -0.57
USF1-209ENST00000529476 PRAMEF5Q5TYX0 476 aa11.47□□□□□ -0.57
USF1-209ENST00000529476 ZNF782Q6ZMW2 699 aaPredicted RBP11.47□□□□□ -0.57
USF1-209ENST00000529476 PDZD9Q8IXQ8 264 aa11.47□□□□□ -0.57
USF1-209ENST00000529476 GAPTQ8N292 157 aa11.47□□□□□ -0.57
USF1-209ENST00000529476 NANPQ8TBE9 248 aa11.47□□□□□ -0.57
USF1-209ENST00000529476 MRPL30Q8TCC3 161 aaKnown RBP11.47□□□□□ -0.57
USF1-209ENST00000529476 ACOT12Q8WYK0 555 aa11.47□□□□□ -0.57
USF1-209ENST00000529476 TNFRSF14Q92956 283 aa11.47□□□□□ -0.57
USF1-209ENST00000529476 LHX4Q969G2 390 aa11.47□□□□□ -0.57
USF1-209ENST00000529476 HDHD3Q9BSH5 251 aaPredicted RBP11.47□□□□□ -0.57
USF1-209ENST00000529476 GAL3ST2Q9H3Q3 398 aa11.47□□□□□ -0.57
USF1-209ENST00000529476 ZMAT3Q9HA38 289 aaKnown RBP11.47□□□□□ -0.57
USF1-209ENST00000529476 TAS2R3Q9NYW6 316 aa11.47□□□□□ -0.57
USF1-209ENST00000529476 TRAPPC2LQ9UL33 140 aa11.47□□□□□ -0.57
USF1-209ENST00000529476 KBTBD11-OT1A0A1B0GTJ5 212 aa11.46□□□□□ -0.57
USF1-209ENST00000529476 SMIM31A0A1B0GVY4 71 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms