RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 TMEM82A0PJX8 343 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 IRGMA1A4Y4 181 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 OGG1O15527 345 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 ANGPTL7O43827 346 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 XPNPEP2O43895 674 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 KDM4BO94953 1096 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 CHRM2P08172 466 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 PIPP12273 146 aaPredicted RBP6.87□□□□□ -1.31
SSBP3-212ENST00000528930 EEF1B2P24534 225 aaKnown RBP6.87□□□□□ -1.31
SSBP3-212ENST00000528930 POU3F4P49335 361 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 UBE2E1P51965 193 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 DLX6P56179 175 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 ERVFRD-1P60508 538 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 ZP1P60852 638 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 RPL31P62899 125 aaKnown RBP6.87□□□□□ -1.31
SSBP3-212ENST00000528930 ST3GAL4Q11206 333 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 ZNF273Q14593 569 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 ZNF146Q15072 292 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 CDK5R1Q15078 307 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 CDK10Q15131 360 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 SMUG1Q53HV7 270 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 UBE2UQ5VVX9 321 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 IDO2Q6ZQW0 420 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 LDLRAD3Q86YD5 345 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 SERPINA12Q8IW75 414 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 Q8IYB0 196 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 FAM185AQ8N0U4 392 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 FAM58AQ8N1B3 248 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 PNKDQ8N490 385 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 TMEM86BQ8N661 226 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 OR4M1Q8NGD0 313 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 OR52N4Q8NGI2 321 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 EMG1Q92979 244 aaKnown RBP6.87□□□□□ -1.31
SSBP3-212ENST00000528930 RFT1Q96AA3 541 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 SNX22Q96L94 193 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 KRTAP9-3Q9BYQ3 159 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 COMMD4Q9H0A8 199 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 METTL8Q9H825 291 aaKnown RBP6.87□□□□□ -1.31
SSBP3-212ENST00000528930 PLCXD1Q9NUJ7 323 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 BABAM2Q9NXR7 383 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 SCN3BQ9NY72 215 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 ZNF221Q9UK13 617 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 DHDHQ9UQ10 334 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 EXOSC1Q9Y3B2 195 aaKnown RBP6.87□□□□□ -1.31
SSBP3-212ENST00000528930 ABCA13Q86UQ4 5058 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 STARD9Q9P2P6 4700 aa6.87□□□□□ -1.31
SSBP3-212ENST00000528930 DSCAML1Q8TD84 2053 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 A0A075B6Q4 140 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 A0A1W2PRD5 423 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 A0A1W2PRF3 423 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 A0A1W2PRM7 423 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 HMX3A6NHT5 357 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 CENPXA8MT69 81 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 C17orf98A8MV24 154 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 NPFFO15130 113 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 BET1O15155 118 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 SHOXO15266 292 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 SULT1B1O43704 296 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 PSPNO60542 156 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 TPPPO94811 219 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 HAND1O96004 215 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 CALCBP10092 127 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 CCL3L1P16619 93 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 DUSP1P28562 367 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 C21orf33P30042 268 aaPredicted RBP6.86□□□□□ -1.31
SSBP3-212ENST00000528930 IER3P46695 156 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 SOX2P48431 317 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 P2RX3P56373 397 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 SLC35A2P78381 396 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 EMX1Q04741 257 aaPredicted RBP6.86□□□□□ -1.31
SSBP3-212ENST00000528930 KISS1Q15726 138 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 DMKNQ6E0U4 476 aaPredicted RBP6.86□□□□□ -1.31
SSBP3-212ENST00000528930 TMPRSS11AQ6ZMR5 421 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 SAXO1Q8IYX7 474 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 OR8H2Q8N162 312 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 OR51A2Q8NGJ7 313 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 OR5D18Q8NGL1 313 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 OR5D14Q8NGL3 314 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 OR5D13Q8NGL4 314 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 OR6F1Q8NGZ6 308 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 OR52N1Q8NH53 320 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 SUN5Q8TC36 379 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 TSEN15Q8WW01 171 aaKnown RBP6.86□□□□□ -1.31
SSBP3-212ENST00000528930 AJUBAQ96IF1 538 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 CHIAQ9BZP6 476 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 FKBP14Q9NWM8 211 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 CNOT2Q9NZN8 540 aaKnown RBP6.86□□□□□ -1.31
SSBP3-212ENST00000528930 PSORS1C1Q9UIG5 152 aa6.86□□□□□ -1.31
SSBP3-212ENST00000528930 TRBV5-5A0A0J9YX44 114 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 LOC105371267A0A1B0GV96 52 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 EFCAB10A6NFE3 127 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 CCNKO75909 580 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 CYB5AP00167 134 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 IGHV4-59P01825 116 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 HCKP08631 526 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 PRKACAP17612 351 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 NAT1P18440 290 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 MYL12AP19105 171 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 LMO1P25800 156 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 AP2S1P53680 142 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms