RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 INTS1Q8N201 2190 aaKnown RBP10.04□□□□□ -0.8
USF1-208ENST00000528768 TRBV6-7A0A0A0MS04 114 aa10.03□□□□□ -0.8
USF1-208ENST00000528768 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.03□□□□□ -0.8
USF1-208ENST00000528768 hCG_1807616A0A1W2PRN6 198 aa10.03□□□□□ -0.8
USF1-208ENST00000528768 F5H0A9 414 aaPredicted RBP10.03□□□□□ -0.8
USF1-208ENST00000528768 J3QT63 122 aa10.03□□□□□ -0.8
USF1-208ENST00000528768 TK1P04183 234 aa10.03□□□□□ -0.8
USF1-208ENST00000528768 PI3P19957 117 aa10.03□□□□□ -0.8
USF1-208ENST00000528768 BCL3P20749 454 aa10.03□□□□□ -0.8
USF1-208ENST00000528768 FCGR2CP31995 323 aa10.03□□□□□ -0.8
USF1-208ENST00000528768 OPRM1P35372 400 aa10.03□□□□□ -0.8
USF1-208ENST00000528768 PRSS12P56730 875 aa10.03□□□□□ -0.8
USF1-208ENST00000528768 PMP22Q01453 160 aa10.03□□□□□ -0.8
USF1-208ENST00000528768 TFF3Q07654 80 aa10.03□□□□□ -0.8
USF1-208ENST00000528768 GABRA6Q16445 453 aa10.03□□□□□ -0.8
USF1-208ENST00000528768 FIP1L1Q6UN15 594 aaKnown RBP10.03□□□□□ -0.8
USF1-208ENST00000528768 CCDC28AQ8IWP9 274 aa10.03□□□□□ -0.8
USF1-208ENST00000528768 ZNF565Q8N9K5 539 aa10.03□□□□□ -0.8
USF1-208ENST00000528768 OR5M9Q8NGP3 310 aa10.03□□□□□ -0.8
USF1-208ENST00000528768 HDHD3Q9BSH5 251 aaPredicted RBP10.03□□□□□ -0.8
USF1-208ENST00000528768 NAA60Q9H7X0 242 aa10.03□□□□□ -0.8
USF1-208ENST00000528768 NBEAL1Q6ZS30 2694 aa10.03□□□□□ -0.8
USF1-208ENST00000528768 ATRQ13535 2644 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 LRP5LA4QPB2 252 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 I3L521 148 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 TAAR5O14804 337 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 SPDEFO95238 335 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 NGFP01138 241 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 HEXAP06865 529 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 LYL1P12980 280 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 TPT1P13693 172 aaKnown RBP10.02□□□□□ -0.81
USF1-208ENST00000528768 RAC2P15153 192 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 CBR1P16152 277 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 MDH2P40926 338 aaKnown RBP10.02□□□□□ -0.81
USF1-208ENST00000528768 P2RX3P56373 397 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 PIGPP57054 158 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 PPP1CBP62140 327 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 SUPT4H1P63272 117 aaKnown RBP10.02□□□□□ -0.81
USF1-208ENST00000528768 NAAAQ02083 359 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 MZT1Q08AG7 82 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 ATXN7L3Q14CW9 347 aaPredicted RBP10.02□□□□□ -0.81
USF1-208ENST00000528768 ANKRD55Q3KP44 614 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 ZNF660Q6AZW8 331 aaPredicted RBP10.02□□□□□ -0.81
USF1-208ENST00000528768 EIF5AL1Q6IS14 154 aaKnown RBP10.02□□□□□ -0.81
USF1-208ENST00000528768 HAGHLQ6PII5 290 aaPredicted RBP10.02□□□□□ -0.81
USF1-208ENST00000528768 ALKAL2Q6UX46 152 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 CLEC9AQ6UXN8 241 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 LGI3Q8N145 548 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 FAM58AQ8N1B3 248 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 C17orf78Q8N4C9 275 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 CNEP1R1Q8N9A8 125 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 HPSE2Q8WWQ2 592 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 RND1Q92730 232 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 TOMM40LQ969M1 308 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 MOB3AQ96BX8 217 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 GALNT14Q96FL9 552 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 BOD1Q96IK1 185 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 ZC4H2Q9NQZ6 224 aa10.02□□□□□ -0.81
USF1-208ENST00000528768 RCC2Q9P258 522 aaKnown RBP10.02□□□□□ -0.81
USF1-208ENST00000528768 GTF3C1Q12789 2109 aa10.01□□□□□ -0.81
USF1-208ENST00000528768 IGKV1D-8A0A087WSZ0 117 aa10.01□□□□□ -0.81
USF1-208ENST00000528768 ZNF503-AS2A6NEH8 195 aa10.01□□□□□ -0.81
USF1-208ENST00000528768 TMEM210A6NLX4 147 aa10.01□□□□□ -0.81
USF1-208ENST00000528768 TRDCB7Z8K6 153 aa10.01□□□□□ -0.81
USF1-208ENST00000528768 HOXB5P09067 269 aa10.01□□□□□ -0.81
USF1-208ENST00000528768 ZNF14P17017 642 aaPredicted RBP10.01□□□□□ -0.81
USF1-208ENST00000528768 PRKACAP17612 351 aa10.01□□□□□ -0.81
USF1-208ENST00000528768 IGHV1-2P23083 117 aa10.01□□□□□ -0.81
USF1-208ENST00000528768 IL32P24001 234 aa10.01□□□□□ -0.81
USF1-208ENST00000528768 WNT5AP41221 380 aa10.01□□□□□ -0.81
USF1-208ENST00000528768 NPBWR2P48146 333 aa10.01□□□□□ -0.81
USF1-208ENST00000528768 FXYD4P59646 89 aa10.01□□□□□ -0.81
USF1-208ENST00000528768 AANATQ16613 207 aa10.01□□□□□ -0.81
USF1-208ENST00000528768 MOB1BQ7L9L4 216 aa10.01□□□□□ -0.81
USF1-208ENST00000528768 POC1AQ8NBT0 407 aa10.01□□□□□ -0.81
USF1-208ENST00000528768 OR5T2Q8NGG2 359 aa10.01□□□□□ -0.81
USF1-208ENST00000528768 FAM57AQ8TBR7 257 aa10.01□□□□□ -0.81
USF1-208ENST00000528768 RTN4IP1Q8WWV3 396 aaPredicted RBP10.01□□□□□ -0.81
USF1-208ENST00000528768 NRGNQ92686 78 aa10.01□□□□□ -0.81
USF1-208ENST00000528768 RBPMSQ93062 196 aaKnown RBP10.01□□□□□ -0.81
USF1-208ENST00000528768 Q9N2K0 584 aa10.01□□□□□ -0.81
USF1-208ENST00000528768 GSKIPQ9P0R6 139 aa10.01□□□□□ -0.81
USF1-208ENST00000528768 GLS2Q9UI32 602 aa10.01□□□□□ -0.81
USF1-208ENST00000528768 PROCRQ9UNN8 238 aa10.01□□□□□ -0.81
USF1-208ENST00000528768 AKAP6Q13023 2319 aa10.01□□□□□ -0.81
USF1-208ENST00000528768 HCFC1P51610 2035 aa10□□□□□ -0.81
USF1-208ENST00000528768 TRBV6-6A0A0A6YYG2 114 aa10□□□□□ -0.81
USF1-208ENST00000528768 RNF222A6NCQ9 220 aa10□□□□□ -0.81
USF1-208ENST00000528768 KRBOX1C9JBD0 128 aa10□□□□□ -0.81
USF1-208ENST00000528768 DEGS1O15121 323 aa10□□□□□ -0.81
USF1-208ENST00000528768 ADAP1O75689 374 aa10□□□□□ -0.81
USF1-208ENST00000528768 WISP2O76076 250 aa10□□□□□ -0.81
USF1-208ENST00000528768 NMBP08949 121 aa10□□□□□ -0.81
USF1-208ENST00000528768 RPS2P15880 293 aaKnown RBP10□□□□□ -0.81
USF1-208ENST00000528768 IDH3GP51553 393 aaPredicted RBP10□□□□□ -0.81
USF1-208ENST00000528768 LUMP51884 338 aaPredicted RBP10□□□□□ -0.81
USF1-208ENST00000528768 S100A10P60903 97 aa10□□□□□ -0.81
USF1-208ENST00000528768 P2RY6Q15077 328 aa10□□□□□ -0.81
USF1-208ENST00000528768 IAH1Q2TAA2 248 aaPredicted RBP10□□□□□ -0.81
USF1-208ENST00000528768 OR2T2Q6IF00 324 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms