RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 Q6ZTK2 550 aa12.51□□□□□ -0.41
CAPN1-213ENST00000527897 KLHDC1Q8N7A1 406 aa12.51□□□□□ -0.41
CAPN1-213ENST00000527897 Q8NFD4 153 aa12.51□□□□□ -0.41
CAPN1-213ENST00000527897 SGCDQ92629 289 aa12.51□□□□□ -0.41
CAPN1-213ENST00000527897 MYDGFQ969H8 173 aa12.51□□□□□ -0.41
CAPN1-213ENST00000527897 KIRREL1Q96J84 757 aa12.51□□□□□ -0.41
CAPN1-213ENST00000527897 TMED9Q9BVK6 235 aa12.51□□□□□ -0.41
CAPN1-213ENST00000527897 MND1Q9BWT6 205 aa12.51□□□□□ -0.41
CAPN1-213ENST00000527897 RANBP3Q9H6Z4 567 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-213ENST00000527897 PCDHB16Q9NRJ7 776 aa12.51□□□□□ -0.41
CAPN1-213ENST00000527897 IL36GQ9NZH8 169 aa12.51□□□□□ -0.41
CAPN1-213ENST00000527897 VWFP04275 2813 aa12.51□□□□□ -0.41
CAPN1-213ENST00000527897 LEUTXA8MZ59 168 aa12.5□□□□□ -0.41
CAPN1-213ENST00000527897 ZNF780AO75290 641 aaPredicted RBP12.5□□□□□ -0.41
CAPN1-213ENST00000527897 PEX14O75381 377 aa12.5□□□□□ -0.41
CAPN1-213ENST00000527897 GPX5O75715 221 aa12.5□□□□□ -0.41
CAPN1-213ENST00000527897 MAPK3P27361 379 aaPredicted RBP12.5□□□□□ -0.41
CAPN1-213ENST00000527897 SSTR5P35346 364 aa12.5□□□□□ -0.41
CAPN1-213ENST00000527897 GNG10P50151 68 aa12.5□□□□□ -0.41
CAPN1-213ENST00000527897 ARHGDIBP52566 201 aa12.5□□□□□ -0.41
CAPN1-213ENST00000527897 EFNB2P52799 333 aa12.5□□□□□ -0.41
CAPN1-213ENST00000527897 INSL4Q14641 139 aa12.5□□□□□ -0.41
CAPN1-213ENST00000527897 MED22Q15528 200 aa12.5□□□□□ -0.41
CAPN1-213ENST00000527897 OR5M11Q96RB7 305 aa12.5□□□□□ -0.41
CAPN1-213ENST00000527897 BANF2Q9H503 90 aa12.5□□□□□ -0.41
CAPN1-213ENST00000527897 IDI2-AS1Q9NZ38 188 aa12.5□□□□□ -0.41
CAPN1-213ENST00000527897 BUB1B-PAK6H3BSN5 160 aa12.49□□□□□ -0.41
CAPN1-213ENST00000527897 H3BUI4 141 aa12.49□□□□□ -0.41
CAPN1-213ENST00000527897 PIN1P1O15428 100 aa12.49□□□□□ -0.41
CAPN1-213ENST00000527897 TSPAN15O95858 294 aa12.49□□□□□ -0.41
CAPN1-213ENST00000527897 IL1AP01583 271 aa12.49□□□□□ -0.41
CAPN1-213ENST00000527897 IGLV1-47P01700 117 aa12.49□□□□□ -0.41
CAPN1-213ENST00000527897 BRS3P32247 399 aa12.49□□□□□ -0.41
CAPN1-213ENST00000527897 CEACAM3P40198 252 aa12.49□□□□□ -0.41
CAPN1-213ENST00000527897 KCNJ3P48549 501 aa12.49□□□□□ -0.41
CAPN1-213ENST00000527897 GPR176Q14439 515 aa12.49□□□□□ -0.41
CAPN1-213ENST00000527897 MPV17LQ2QL34 196 aa12.49□□□□□ -0.41
CAPN1-213ENST00000527897 HLA-DRB5Q30154 266 aa12.49□□□□□ -0.41
CAPN1-213ENST00000527897 NHLRC3Q5JS37 347 aa12.49□□□□□ -0.41
CAPN1-213ENST00000527897 LINC00596Q86U02 117 aa12.49□□□□□ -0.41
CAPN1-213ENST00000527897 FAM110DQ8TAY7 271 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-213ENST00000527897 UBALD1Q8TB05 177 aa12.49□□□□□ -0.41
CAPN1-213ENST00000527897 CCDC107Q8WV48 283 aa12.49□□□□□ -0.41
CAPN1-213ENST00000527897 CAPSLQ8WWF8 208 aa12.49□□□□□ -0.41
CAPN1-213ENST00000527897 PRSS22Q9GZN4 317 aa12.49□□□□□ -0.41
CAPN1-213ENST00000527897 CCDC90BQ9GZT6 254 aa12.49□□□□□ -0.41
CAPN1-213ENST00000527897 ZNF702PQ9H963 129 aa12.49□□□□□ -0.41
CAPN1-213ENST00000527897 WNK1Q9H4A3 2382 aa12.49□□□□□ -0.41
CAPN1-213ENST00000527897 TMEM30CPA0ZSE6 113 aa12.48□□□□□ -0.41
CAPN1-213ENST00000527897 MEGF11A6BM72 1044 aa12.48□□□□□ -0.41
CAPN1-213ENST00000527897 H0YHG0 523 aa12.48□□□□□ -0.41
CAPN1-213ENST00000527897 CRTAPO75718 401 aaPredicted RBP12.48□□□□□ -0.41
CAPN1-213ENST00000527897 CD1AP06126 327 aa12.48□□□□□ -0.41
CAPN1-213ENST00000527897 CGB3P0DN86 165 aa12.48□□□□□ -0.41
CAPN1-213ENST00000527897 CGB7P0DN87 165 aa12.48□□□□□ -0.41
CAPN1-213ENST00000527897 CD34P28906 385 aa12.48□□□□□ -0.41
CAPN1-213ENST00000527897 DYNLT3P51808 116 aa12.48□□□□□ -0.41
CAPN1-213ENST00000527897 HERPUD1Q15011 391 aa12.48□□□□□ -0.41
CAPN1-213ENST00000527897 SPHARQ15513 63 aa12.48□□□□□ -0.41
CAPN1-213ENST00000527897 ACSM3Q53FZ2 586 aa12.48□□□□□ -0.41
CAPN1-213ENST00000527897 TPTE2P1Q5T6R2 138 aa12.48□□□□□ -0.41
CAPN1-213ENST00000527897 FAM27D1Q5T7N8 215 aa12.48□□□□□ -0.41
CAPN1-213ENST00000527897 DTX3Q8N9I9 347 aa12.48□□□□□ -0.41
CAPN1-213ENST00000527897 OR9G1Q8NH87 305 aa12.48□□□□□ -0.41
CAPN1-213ENST00000527897 THRSPQ92748 146 aa12.48□□□□□ -0.41
CAPN1-213ENST00000527897 FAM46BQ96A09 425 aa12.48□□□□□ -0.41
CAPN1-213ENST00000527897 CREB3L1Q96BA8 519 aa12.48□□□□□ -0.41
CAPN1-213ENST00000527897 SELENOIQ9C0D9 397 aa12.48□□□□□ -0.41
CAPN1-213ENST00000527897 MMP28Q9H239 520 aa12.48□□□□□ -0.41
CAPN1-213ENST00000527897 VCX3BQ9H321 246 aa12.48□□□□□ -0.41
CAPN1-213ENST00000527897 TPRKBQ9Y3C4 175 aa12.48□□□□□ -0.41
CAPN1-213ENST00000527897 MEGF8Q7Z7M0 2845 aa12.47□□□□□ -0.41
CAPN1-213ENST00000527897 A0A1W2PPE3 182 aa12.47□□□□□ -0.41
CAPN1-213ENST00000527897 HSMCR30P0CW71 290 aa12.47□□□□□ -0.41
CAPN1-213ENST00000527897 VHLP40337 213 aa12.47□□□□□ -0.41
CAPN1-213ENST00000527897 MNDAP41218 407 aa12.47□□□□□ -0.41
CAPN1-213ENST00000527897 BLCAPP62952 87 aa12.47□□□□□ -0.41
CAPN1-213ENST00000527897 C2orf68Q2NKX9 166 aa12.47□□□□□ -0.41
CAPN1-213ENST00000527897 RBM48Q5RL73 367 aaKnown RBP12.47□□□□□ -0.41
CAPN1-213ENST00000527897 C11orf88Q6PI97 169 aa12.47□□□□□ -0.41
CAPN1-213ENST00000527897 NKAIN3Q8N8D7 197 aa12.47□□□□□ -0.41
CAPN1-213ENST00000527897 TOMM40LQ969M1 308 aa12.47□□□□□ -0.41
CAPN1-213ENST00000527897 RPEQ96AT9 228 aa12.47□□□□□ -0.41
CAPN1-213ENST00000527897 MMP27Q9H306 513 aa12.47□□□□□ -0.41
CAPN1-213ENST00000527897 NCOR1P1Q9H4R4 102 aa12.47□□□□□ -0.41
CAPN1-213ENST00000527897 IFT22Q9H7X7 185 aa12.47□□□□□ -0.41
CAPN1-213ENST00000527897 PSG11Q9UQ72 335 aa12.47□□□□□ -0.41
CAPN1-213ENST00000527897 AMMECR1Q9Y4X0 333 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-213ENST00000527897 A0A087X0M5 115 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 A0A1B0GX30 115 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 MCRIP1C9JLW8 97 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 J3QR06 171 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 AIPO00170 330 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 RGS10O43665 173 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 CSF1P09603 554 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 MGMTP16455 207 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 MYF6P23409 242 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 GPR50Q13585 617 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 TMEM95Q3KNT9 176 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 LIPKQ5VXJ0 399 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms