RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 CT45A7P0DMV0 189 aa13□□□□□ -0.33
USP47-207ENST00000527733 GLRXP35754 106 aa13□□□□□ -0.33
USP47-207ENST00000527733 SNTB1Q13884 538 aaKnown RBP13□□□□□ -0.33
USP47-207ENST00000527733 CT45A1Q5HYN5 189 aa13□□□□□ -0.33
USP47-207ENST00000527733 CT45A3Q8NHU0 189 aa13□□□□□ -0.33
USP47-207ENST00000527733 RCL1Q9Y2P8 373 aaKnown RBP13□□□□□ -0.33
USP47-207ENST00000527733 TSPAN9O75954 239 aa12.99□□□□□ -0.33
USP47-207ENST00000527733 CECR9P0C854 216 aa12.99□□□□□ -0.33
USP47-207ENST00000527733 CHATP28329 748 aa12.99□□□□□ -0.33
USP47-207ENST00000527733 ZNF260Q3ZCT1 412 aa12.99□□□□□ -0.33
USP47-207ENST00000527733 GGNBP1Q5YKI7 109 aa12.99□□□□□ -0.33
USP47-207ENST00000527733 BTNL3Q6UXE8 466 aa12.99□□□□□ -0.33
USP47-207ENST00000527733 BAP18Q8IXM2 172 aa12.99□□□□□ -0.33
USP47-207ENST00000527733 SAXO1Q8IYX7 474 aa12.99□□□□□ -0.33
USP47-207ENST00000527733 TMED6Q8WW62 240 aa12.99□□□□□ -0.33
USP47-207ENST00000527733 SPRR3Q9UBC9 169 aa12.99□□□□□ -0.33
USP47-207ENST00000527733 SS18L1O75177 396 aaPredicted RBP12.99□□□□□ -0.33
USP47-207ENST00000527733 FCGR3AP08637 254 aa12.99□□□□□ -0.33
USP47-207ENST00000527733 IGHV1-2P23083 117 aa12.99□□□□□ -0.33
USP47-207ENST00000527733 ASCL1P50553 236 aa12.99□□□□□ -0.33
USP47-207ENST00000527733 COL10A1Q03692 680 aa12.99□□□□□ -0.33
USP47-207ENST00000527733 ZNF674Q2M3X9 581 aa12.99□□□□□ -0.33
USP47-207ENST00000527733 LILRB4Q8NHJ6 448 aa12.99□□□□□ -0.33
USP47-207ENST00000527733 ZNF649Q9BS31 505 aa12.99□□□□□ -0.33
USP47-207ENST00000527733 OR2W1Q9Y3N9 320 aa12.99□□□□□ -0.33
USP47-207ENST00000527733 CUL9Q8IWT3 2517 aa12.99□□□□□ -0.33
USP47-207ENST00000527733 NBL1P41271 181 aa12.99□□□□□ -0.33
USP47-207ENST00000527733 KIR2DS2P43631 304 aa12.99□□□□□ -0.33
USP47-207ENST00000527733 RPL31P62899 125 aaKnown RBP12.99□□□□□ -0.33
USP47-207ENST00000527733 RTP5Q14D33 572 aa12.99□□□□□ -0.33
USP47-207ENST00000527733 GGNQ86UU5 652 aa12.99□□□□□ -0.33
USP47-207ENST00000527733 KCNRGQ8N5I3 272 aa12.99□□□□□ -0.33
USP47-207ENST00000527733 MDS2Q8NDY4 140 aa12.99□□□□□ -0.33
USP47-207ENST00000527733 RGP1Q92546 391 aaPredicted RBP12.99□□□□□ -0.33
USP47-207ENST00000527733 ELLP55199 621 aaPredicted RBP12.98□□□□□ -0.33
USP47-207ENST00000527733 ADGRG7Q96K78 797 aa12.98□□□□□ -0.33
USP47-207ENST00000527733 MOGAT2Q3SYC2 334 aa12.98□□□□□ -0.33
USP47-207ENST00000527733 ZDHHC16Q969W1 377 aa12.98□□□□□ -0.33
USP47-207ENST00000527733 UHRF2Q96PU4 802 aa12.98□□□□□ -0.33
USP47-207ENST00000527733 DIDO1Q9BTC0 2240 aaKnown RBP12.98□□□□□ -0.33
USP47-207ENST00000527733 IGKV3D-15A0A087WSY6 115 aa12.98□□□□□ -0.33
USP47-207ENST00000527733 hCG_38984A0A1B0GV85 526 aa12.98□□□□□ -0.33
USP47-207ENST00000527733 GPR6P46095 362 aaPredicted RBP12.98□□□□□ -0.33
USP47-207ENST00000527733 PPT1P50897 306 aa12.98□□□□□ -0.33
USP47-207ENST00000527733 GFRA1P56159 465 aa12.98□□□□□ -0.33
USP47-207ENST00000527733 CLEC18BQ6UXF7 455 aa12.98□□□□□ -0.33
USP47-207ENST00000527733 TBC1D26Q86UD7 250 aa12.98□□□□□ -0.33
USP47-207ENST00000527733 SLC25A42Q86VD7 318 aa12.98□□□□□ -0.33
USP47-207ENST00000527733 THNSL2Q86YJ6 484 aa12.98□□□□□ -0.33
USP47-207ENST00000527733 ZNF485Q8NCK3 441 aa12.98□□□□□ -0.33
USP47-207ENST00000527733 SFT2D1Q8WV19 159 aa12.98□□□□□ -0.33
USP47-207ENST00000527733 PINX1Q96BK5 328 aaKnown RBP12.98□□□□□ -0.33
USP47-207ENST00000527733 CCL28Q9NRJ3 127 aa12.98□□□□□ -0.33
USP47-207ENST00000527733 SLC2A9Q9NRM0 540 aa12.98□□□□□ -0.33
USP47-207ENST00000527733 LPAR3Q9UBY5 353 aa12.98□□□□□ -0.33
USP47-207ENST00000527733 INTS1Q8N201 2190 aaKnown RBP12.98□□□□□ -0.33
USP47-207ENST00000527733 SPTBN1Q01082 2364 aaKnown RBP12.98□□□□□ -0.33
USP47-207ENST00000527733 EFNB1P98172 346 aa12.98□□□□□ -0.33
USP47-207ENST00000527733 GAPTQ8N292 157 aa12.98□□□□□ -0.33
USP47-207ENST00000527733 RBPMSQ93062 196 aaKnown RBP12.98□□□□□ -0.33
USP47-207ENST00000527733 SLC25A10Q9UBX3 287 aaPredicted RBP12.98□□□□□ -0.33
USP47-207ENST00000527733 LY86O95711 162 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 CST4P01036 141 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 ADRB1P08588 477 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 OR4S2Q8NH73 311 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 AKR1E2Q96JD6 320 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 C1QTNF5Q9BXJ0 243 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 CACNG5Q9UF02 275 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 A8MXE2 369 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 OR2H2O95918 312 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 IFITM3Q01628 133 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 SRSF6Q13247 344 aaKnown RBP12.97□□□□□ -0.33
USP47-207ENST00000527733 TBR1Q16650 682 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 ZIC4Q8N9L1 334 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 TMEM56Q96MV1 263 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 COL25A1Q9BXS0 654 aaPredicted RBP12.97□□□□□ -0.33
USP47-207ENST00000527733 ARV1Q9H2C2 271 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 FREM3P0C091 2139 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 ANKRD34BA5PLL1 514 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 IFNL4K9M1U5 179 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 CST7O76096 145 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 H2AFB1P0C5Y9 115 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 S100A2P29034 98 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 VAX1Q5SQQ9 334 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 ZNF529Q6P280 563 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 RAB40CQ96S21 281 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 CCL13Q99616 98 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 HEXA-AS1Q9H8Q6 139 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 HSF4Q9ULV5 492 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 MSRB2Q9Y3D2 182 aa12.97□□□□□ -0.33
USP47-207ENST00000527733 SHISA3A0PJX4 238 aa12.96□□□□□ -0.33
USP47-207ENST00000527733 H3F3CQ6NXT2 135 aa12.96□□□□□ -0.33
USP47-207ENST00000527733 OR5M8Q8NGP6 311 aa12.96□□□□□ -0.33
USP47-207ENST00000527733 IL36GQ9NZH8 169 aa12.96□□□□□ -0.33
USP47-207ENST00000527733 TMEM14DPA8MWL7 114 aa12.96□□□□□ -0.33
USP47-207ENST00000527733 ADAP1O75689 374 aa12.96□□□□□ -0.33
USP47-207ENST00000527733 TESK1Q15569 626 aa12.96□□□□□ -0.33
USP47-207ENST00000527733 TMEM182Q6ZP80 229 aaPredicted RBP12.96□□□□□ -0.33
USP47-207ENST00000527733 LFNGQ8NES3 379 aa12.96□□□□□ -0.33
USP47-207ENST00000527733 SLC35D1Q9NTN3 355 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms