RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 UFD1Q92890 307 aa14.16□□□□□ -0.14
NR1H3-228ENST00000525441 CREB3L1Q96BA8 519 aa14.16□□□□□ -0.14
NR1H3-228ENST00000525441 UQCC2Q9BRT2 126 aa14.16□□□□□ -0.14
NR1H3-228ENST00000525441 TMED9Q9BVK6 235 aa14.16□□□□□ -0.14
NR1H3-228ENST00000525441 NPFFR1Q9GZQ6 430 aa14.16□□□□□ -0.14
NR1H3-228ENST00000525441 RANBP3Q9H6Z4 567 aaPredicted RBP14.16□□□□□ -0.14
NR1H3-228ENST00000525441 SPACA1Q9HBV2 294 aa14.16□□□□□ -0.14
NR1H3-228ENST00000525441 TCF7L1Q9HCS4 588 aa14.16□□□□□ -0.14
NR1H3-228ENST00000525441 CALYQ9NYX4 217 aa14.16□□□□□ -0.14
NR1H3-228ENST00000525441 DPM3Q9P2X0 92 aa14.16□□□□□ -0.14
NR1H3-228ENST00000525441 TCF19Q9Y242 345 aa14.16□□□□□ -0.14
NR1H3-228ENST00000525441 HILPDAQ9Y5L2 63 aa14.16□□□□□ -0.14
NR1H3-228ENST00000525441 F2RL2O00254 374 aa14.15□□□□□ -0.14
NR1H3-228ENST00000525441 CRHBPP24387 322 aa14.15□□□□□ -0.14
NR1H3-228ENST00000525441 PRRX1P54821 245 aa14.15□□□□□ -0.14
NR1H3-228ENST00000525441 C17orf58Q2M2W7 97 aa14.15□□□□□ -0.14
NR1H3-228ENST00000525441 LDLRAD2Q5SZI1 272 aa14.15□□□□□ -0.14
NR1H3-228ENST00000525441 ATAD3CQ5T2N8 411 aa14.15□□□□□ -0.14
NR1H3-228ENST00000525441 SLC35E4Q6ICL7 350 aa14.15□□□□□ -0.14
NR1H3-228ENST00000525441 OR4P4Q8NGL7 312 aa14.15□□□□□ -0.14
NR1H3-228ENST00000525441 OR13A1Q8NGR1 328 aa14.15□□□□□ -0.14
NR1H3-228ENST00000525441 PLPPR1Q8TBJ4 325 aa14.15□□□□□ -0.14
NR1H3-228ENST00000525441 NEK7Q8TDX7 302 aa14.15□□□□□ -0.14
NR1H3-228ENST00000525441 SGCDQ92629 289 aa14.15□□□□□ -0.14
NR1H3-228ENST00000525441 CCDC90BQ9GZT6 254 aa14.15□□□□□ -0.14
NR1H3-228ENST00000525441 FBLN5Q9UBX5 448 aa14.15□□□□□ -0.14
NR1H3-228ENST00000525441 BLOC1S6Q9UL45 172 aa14.15□□□□□ -0.14
NR1H3-228ENST00000525441 A0A087X0M5 115 aa14.14□□□□□ -0.15
NR1H3-228ENST00000525441 A0A1B0GX30 115 aa14.14□□□□□ -0.15
NR1H3-228ENST00000525441 TMEM30CPA0ZSE6 113 aa14.14□□□□□ -0.15
NR1H3-228ENST00000525441 LEUTXA8MZ59 168 aa14.14□□□□□ -0.15
NR1H3-228ENST00000525441 IL1AP01583 271 aa14.14□□□□□ -0.15
NR1H3-228ENST00000525441 CGB3P0DN86 165 aa14.14□□□□□ -0.15
NR1H3-228ENST00000525441 CGB7P0DN87 165 aa14.14□□□□□ -0.15
NR1H3-228ENST00000525441 NFYBP25208 207 aa14.14□□□□□ -0.15
NR1H3-228ENST00000525441 GDNFP39905 211 aa14.14□□□□□ -0.15
NR1H3-228ENST00000525441 CEACAM3P40198 252 aa14.14□□□□□ -0.15
NR1H3-228ENST00000525441 KIR2DS4P43632 304 aa14.14□□□□□ -0.15
NR1H3-228ENST00000525441 C11orf88Q6PI97 169 aa14.14□□□□□ -0.15
NR1H3-228ENST00000525441 UNQ9370/PRO34162Q6UXP9 181 aa14.14□□□□□ -0.15
NR1H3-228ENST00000525441 BAIAP2L2Q6UXY1 529 aa14.14□□□□□ -0.15
NR1H3-228ENST00000525441 PHYHIPQ92561 330 aa14.14□□□□□ -0.15
NR1H3-228ENST00000525441 CITED1Q99966 193 aa14.14□□□□□ -0.15
NR1H3-228ENST00000525441 ZNF286AQ9HBT8 521 aa14.14□□□□□ -0.15
NR1H3-228ENST00000525441 IDI2-AS1Q9NZ38 188 aa14.14□□□□□ -0.15
NR1H3-228ENST00000525441 GHRLQ9UBU3 117 aa14.14□□□□□ -0.15
NR1H3-228ENST00000525441 MGAM2Q2M2H8 2515 aa14.14□□□□□ -0.15
NR1H3-228ENST00000525441 A0A1W2PP11 408 aa14.13□□□□□ -0.15
NR1H3-228ENST00000525441 FAM172BPA6NC97 362 aa14.13□□□□□ -0.15
NR1H3-228ENST00000525441 A6NDX4 124 aa14.13□□□□□ -0.15
NR1H3-228ENST00000525441 IGLV1-47P01700 117 aa14.13□□□□□ -0.15
NR1H3-228ENST00000525441 HSMCR30P0CW71 290 aa14.13□□□□□ -0.15
NR1H3-228ENST00000525441 GZMHP20718 246 aa14.13□□□□□ -0.15
NR1H3-228ENST00000525441 RAB13P51153 203 aa14.13□□□□□ -0.15
NR1H3-228ENST00000525441 RBM39Q14498 530 aaKnown RBP14.13□□□□□ -0.15
NR1H3-228ENST00000525441 LIPKQ5VXJ0 399 aa14.13□□□□□ -0.15
NR1H3-228ENST00000525441 GLT8D1Q68CQ7 371 aa14.13□□□□□ -0.15
NR1H3-228ENST00000525441 PRSS48Q7RTY5 328 aa14.13□□□□□ -0.15
NR1H3-228ENST00000525441 CEACAM19Q7Z692 300 aa14.13□□□□□ -0.15
NR1H3-228ENST00000525441 OR10A7Q8NGE5 316 aa14.13□□□□□ -0.15
NR1H3-228ENST00000525441 OR9G1Q8NH87 305 aa14.13□□□□□ -0.15
NR1H3-228ENST00000525441 OR2T6Q8NHC8 308 aa14.13□□□□□ -0.15
NR1H3-228ENST00000525441 MRGPRDQ8TDS7 321 aa14.13□□□□□ -0.15
NR1H3-228ENST00000525441 KIRREL1Q96J84 757 aa14.13□□□□□ -0.15
NR1H3-228ENST00000525441 LINC00574Q9H8X3 128 aa14.13□□□□□ -0.15
NR1H3-228ENST00000525441 ISYNA1Q9NPH2 558 aa14.13□□□□□ -0.15
NR1H3-228ENST00000525441 FAM90A10PA6NDY2 464 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 FAM90A18PA6NE21 464 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 FAM90A16PA6NEW6 464 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 FAM90A20PA6NIJ5 464 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 FAM90A7PA6NKC0 464 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 FAM90A22PA8MWA6 464 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 FAM90A12PA8MX19 464 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 FAM90A5PA8MXJ8 464 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 FAM90A23PA8MXZ1 464 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 MCRIP1C9JLW8 97 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 TIMM23O14925 209 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 CHST1O43916 411 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 CRTAPO75718 401 aaPredicted RBP14.12□□□□□ -0.15
NR1H3-228ENST00000525441 FAM90A15PP0C7V4 464 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 FAM90A13PP0C7W8 464 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 FAM90A14PP0C7W9 464 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 FAM90A24PP0C7X0 464 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 UBBP0CG47 229 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 MGMTP16455 207 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 PSMA1P25786 263 aaKnown RBP14.12□□□□□ -0.15
NR1H3-228ENST00000525441 BRS3P32247 399 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 GABARAPL2P60520 117 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 SRSF4Q08170 494 aaKnown RBP14.12□□□□□ -0.15
NR1H3-228ENST00000525441 TPBGQ13641 420 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 INSL4Q14641 139 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 TRAM1Q15629 374 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 HLA-DRB5Q30154 266 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 HSD17B12Q53GQ0 312 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 LYPD6Q86Y78 171 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 SELENOIQ9C0D9 397 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 CST11Q9H112 138 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 ZNF581Q9P0T4 197 aa14.12□□□□□ -0.15
NR1H3-228ENST00000525441 AMMECR1Q9Y4X0 333 aaPredicted RBP14.12□□□□□ -0.15
NR1H3-228ENST00000525441 OOSP1A8MZH6 123 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms