RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 SMARCD1Q96GM5 515 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 DIRAS2Q96HU8 199 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 HIST1H4GQ99525 98 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 C12orf57Q99622 126 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 RTBDNQ9BSG5 229 aaPredicted RBP3.55□□□□□ -1.84
CD44-213ENST00000525209 SUCNR1Q9BXA5 334 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 POMKQ9H5K3 350 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 XCL2Q9UBD3 114 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 SS18L2Q9UHA2 77 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 JPT1Q9UK76 154 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 SLX4Q8IY92 1834 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 CD163L1Q9NR16 1453 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 ASTN1O14525 1302 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 CLUHO75153 1309 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 IGHV4OR15-8A0A075B7B6 117 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 IGHV3OR16-9A0A0B4J2B5 98 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 IGHV3-38A0A0C4DH36 116 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 TEX50A0A1B0GTY4 177 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 RBFOX3A6NFN3 312 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 FAM220BPB1ANY3 271 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 TMX2-CTNND1H3BSU7 103 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 K7EQG2 157 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 SLC17A3O00476 420 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 FAAHO00519 579 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 SLC17A2O00624 439 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 MFSD11O43934 449 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 FGF17O60258 216 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 RDH16O75452 317 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 CRLF1O75462 422 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 OR2J2O76002 312 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 C6orf47O95873 294 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 REG1AP05451 166 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 PRSS1P07477 247 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 PRSS2P07478 247 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 CT45A10P0DMU9 189 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 OR5H8P0DN80 308 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 GPX2P18283 190 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 CXCL3P19876 107 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 SDC4P31431 198 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 NUDT1P36639 197 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 HSPE1P61604 102 aaKnown RBP3.54□□□□□ -1.84
CD44-213ENST00000525209 PMVKQ15126 192 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 QPRTQ15274 297 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 CCL14Q16627 93 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 TCTEX1D4Q5JR98 221 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 FAM162BQ5T6X4 162 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 SAMD13Q5VXD3 122 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 ANKRD22Q5VYY1 191 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 UGT2A3Q6UWM9 527 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 TCF24Q7RTU0 167 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 NAA40Q86UY6 237 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 C17orf82Q86X59 251 aaPredicted RBP3.54□□□□□ -1.84
CD44-213ENST00000525209 ZNF567Q8N184 647 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 C4orf32Q8N8J7 132 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 UBAC2Q8NBM4 344 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 ZNF485Q8NCK3 441 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 OR2K2Q8NGT1 345 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 OR10D3Q8NH80 312 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 RGP1Q92546 391 aaPredicted RBP3.54□□□□□ -1.84
CD44-213ENST00000525209 DCPSQ96C86 337 aaKnown RBP3.54□□□□□ -1.84
CD44-213ENST00000525209 L3HYPDHQ96EM0 354 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 CNRIP1Q96F85 164 aaPredicted RBP3.54□□□□□ -1.84
CD44-213ENST00000525209 MRPL48Q96GC5 212 aaKnown RBP3.54□□□□□ -1.84
CD44-213ENST00000525209 FMC1Q96HJ9 113 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 C8orf49Q96NF6 230 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 ZNF747Q9BV97 191 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 SLIRPQ9GZT3 109 aaKnown RBP3.54□□□□□ -1.84
CD44-213ENST00000525209 CCDC90BQ9GZT6 254 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 TMPRSS5Q9H3S3 457 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 FAM96AQ9H5X1 160 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 GNB4Q9HAV0 340 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 DMAC2Q9NW81 257 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 PYCARDQ9ULZ3 195 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 NEU3Q9UQ49 428 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 ORC6Q9Y5N6 252 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 VWA8A3KMH1 1905 aa3.54□□□□□ -1.84
CD44-213ENST00000525209 KIAA1551Q9HCM1 1747 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 A0A087WWV3 80 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 TEX48A0A1B0GUV7 120 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 A0A1B0GXF2 115 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 D6RAR5 112 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 H0Y9J4 135 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 H7C417 338 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 I3L4J1 428 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 DLEU1O43261 78 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 YIF1AO95070 293 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 PDYNP01213 254 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 TTRP02766 147 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 PFN1P07737 140 aaKnown RBP3.53□□□□□ -1.84
CD44-213ENST00000525209 BPGMP07738 259 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 HTR1AP08908 422 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 FBP1P09467 338 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 CERS1P27544 350 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 GGT2P36268 569 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 CDKN2BP42772 138 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 LGALS7P47929 136 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 CACNG7P62955 275 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 PRR3P79522 188 aaKnown RBP3.53□□□□□ -1.84
CD44-213ENST00000525209 DEFA6Q01524 100 aa3.53□□□□□ -1.84
CD44-213ENST00000525209 ZNF763Q0D2J5 394 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms