RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 TRAPPC2LQ9UL33 140 aa12.91□□□□□ -0.34
BEST1-204ENST00000524926 A0A0D9SG52 128 aa12.91□□□□□ -0.34
BEST1-204ENST00000524926 C16orf97H3BN30 126 aa12.91□□□□□ -0.34
BEST1-204ENST00000524926 ZNF250P15622 560 aa12.91□□□□□ -0.34
BEST1-204ENST00000524926 KLF3P57682 345 aaPredicted RBP12.91□□□□□ -0.34
BEST1-204ENST00000524926 CCDC71LQ8N9Z2 235 aa12.91□□□□□ -0.34
BEST1-204ENST00000524926 INO80EQ8NBZ0 244 aaPredicted RBP12.91□□□□□ -0.34
BEST1-204ENST00000524926 TLNRD1Q9H1K6 362 aa12.91□□□□□ -0.34
BEST1-204ENST00000524926 TREM2Q9NZC2 230 aa12.91□□□□□ -0.34
BEST1-204ENST00000524926 H7C1Q1 480 aa12.9□□□□□ -0.34
BEST1-204ENST00000524926 ERVH48-1M5A8F1 160 aa12.9□□□□□ -0.34
BEST1-204ENST00000524926 KCNAB3O43448 404 aa12.9□□□□□ -0.34
BEST1-204ENST00000524926 IFNA21P01568 189 aa12.9□□□□□ -0.34
BEST1-204ENST00000524926 GNRHRP30968 328 aa12.9□□□□□ -0.34
BEST1-204ENST00000524926 HLA-DRB3P79483 266 aa12.9□□□□□ -0.34
BEST1-204ENST00000524926 ZNF880Q6PDB4 577 aa12.9□□□□□ -0.34
BEST1-204ENST00000524926 ZNF497Q6ZNH5 498 aa12.9□□□□□ -0.34
BEST1-204ENST00000524926 OR4A4PQ8NGN8 299 aa12.9□□□□□ -0.34
BEST1-204ENST00000524926 OR10J5Q8NHC4 309 aa12.9□□□□□ -0.34
BEST1-204ENST00000524926 GALNT14Q96FL9 552 aa12.9□□□□□ -0.34
BEST1-204ENST00000524926 KIRREL1Q96J84 757 aa12.9□□□□□ -0.34
BEST1-204ENST00000524926 VRK1Q99986 396 aaPredicted RBP12.9□□□□□ -0.34
BEST1-204ENST00000524926 ELOVL5Q9NYP7 299 aa12.9□□□□□ -0.34
BEST1-204ENST00000524926 PCDHB10Q9UN67 800 aa12.9□□□□□ -0.34
BEST1-204ENST00000524926 PHF1O43189 567 aaPredicted RBP12.9□□□□□ -0.34
BEST1-204ENST00000524926 IGHV3-13P01766 116 aa12.9□□□□□ -0.34
BEST1-204ENST00000524926 CCKARP32238 428 aa12.9□□□□□ -0.34
BEST1-204ENST00000524926 NKX6-1P78426 367 aaPredicted RBP12.9□□□□□ -0.34
BEST1-204ENST00000524926 TMEM187Q14656 261 aa12.9□□□□□ -0.34
BEST1-204ENST00000524926 PCSK4Q6UW60 755 aa12.9□□□□□ -0.34
BEST1-204ENST00000524926 ACP7Q6ZNF0 438 aa12.9□□□□□ -0.34
BEST1-204ENST00000524926 ACOT7LQ6ZUV0 252 aa12.9□□□□□ -0.34
BEST1-204ENST00000524926 FAM219AQ8IW50 185 aa12.9□□□□□ -0.34
BEST1-204ENST00000524926 PCNPQ8WW12 178 aaKnown RBP12.9□□□□□ -0.34
BEST1-204ENST00000524926 DCUN1D4Q92564 292 aa12.9□□□□□ -0.34
BEST1-204ENST00000524926 SLC5A7Q9GZV3 580 aa12.9□□□□□ -0.34
BEST1-204ENST00000524926 PSPNO60542 156 aa12.89□□□□□ -0.35
BEST1-204ENST00000524926 OR2F2O95006 317 aa12.89□□□□□ -0.35
BEST1-204ENST00000524926 CD40P25942 277 aa12.89□□□□□ -0.35
BEST1-204ENST00000524926 OR2F1Q13607 317 aa12.89□□□□□ -0.35
BEST1-204ENST00000524926 IAH1Q2TAA2 248 aaPredicted RBP12.89□□□□□ -0.35
BEST1-204ENST00000524926 RELL2Q8NC24 303 aaPredicted RBP12.89□□□□□ -0.35
BEST1-204ENST00000524926 TMEM171Q8WVE6 324 aa12.89□□□□□ -0.35
BEST1-204ENST00000524926 MRPL24Q96A35 216 aaKnown RBP12.89□□□□□ -0.35
BEST1-204ENST00000524926 SUCNR1Q9BXA5 334 aa12.89□□□□□ -0.35
BEST1-204ENST00000524926 TAAR3PQ9P1P4 343 aa12.89□□□□□ -0.35
BEST1-204ENST00000524926 MEMO1Q9Y316 297 aa12.89□□□□□ -0.35
BEST1-204ENST00000524926 SPTBN4Q9H254 2564 aa12.89□□□□□ -0.35
BEST1-204ENST00000524926 PCNX1Q96RV3 2341 aa12.89□□□□□ -0.35
BEST1-204ENST00000524926 IGKV1D-13A0A0B4J2D9 117 aa12.89□□□□□ -0.35
BEST1-204ENST00000524926 RNF222A6NCQ9 220 aa12.89□□□□□ -0.35
BEST1-204ENST00000524926 MPPED1O15442 326 aa12.89□□□□□ -0.35
BEST1-204ENST00000524926 IGKV1-13P0DP09 117 aa12.89□□□□□ -0.35
BEST1-204ENST00000524926 RAB14P61106 215 aa12.89□□□□□ -0.35
BEST1-204ENST00000524926 SHEQ5VZ18 495 aa12.89□□□□□ -0.35
BEST1-204ENST00000524926 GGNBP1Q5YKI7 109 aa12.89□□□□□ -0.35
BEST1-204ENST00000524926 KCNRGQ8N5I3 272 aa12.89□□□□□ -0.35
BEST1-204ENST00000524926 LRRC29Q8WV35 223 aa12.89□□□□□ -0.35
BEST1-204ENST00000524926 RNF126Q9BV68 326 aa12.89□□□□□ -0.35
BEST1-204ENST00000524926 IGF2RP11717 2491 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 A0A1B0GWJ7 208 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 KANTRA0A1W2PQU2 76 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 ZSCAN5BA6NJL1 495 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 HSD17B6O14756 317 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 SPRY3O43610 288 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 TUSC2O75896 110 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 PTBP3O95758 552 aaKnown RBP12.88□□□□□ -0.35
BEST1-204ENST00000524926 TFF1P04155 84 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 SELENOVP59797 346 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 S100A10P60903 97 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 RAB32Q13637 225 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 ZNF345Q14585 488 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 LIAT1Q6ZQX7 453 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 ZNF818PQ6ZRF7 136 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 MOB1BQ7L9L4 216 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 WFDC8Q8IUA0 241 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 FOXRED2Q8IWF2 684 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 GAPTQ8N292 157 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 UBALD1Q8TB05 177 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 GLYATL2Q8WU03 294 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 CHD3Q12873 2000 aaKnown RBP12.88□□□□□ -0.35
BEST1-204ENST00000524926 TRBV6-7A0A0A0MS04 114 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 C3orf85A0A1B0GTC6 90 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 H0YIZ8 118 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 GPR31O00270 319 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 SPDEFO95238 335 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 KCNJ3P48549 501 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 RPS23P62266 143 aaKnown RBP12.88□□□□□ -0.35
BEST1-204ENST00000524926 SMIM21Q3B7S5 101 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 C6orf183Q5T699 404 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 ALKAL2Q6UX46 152 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 TMEM108Q6UXF1 575 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 SLC51BQ86UW2 128 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 FAM185AQ8N0U4 392 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 RND1Q92730 232 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 CITED4Q96RK1 184 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 TP53RKQ96S44 253 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 CCL28Q9NRJ3 127 aa12.88□□□□□ -0.35
BEST1-204ENST00000524926 ARID1AO14497 2285 aa12.87□□□□□ -0.35
BEST1-204ENST00000524926 HSPA12AO43301 675 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms