RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 TMEM56-RWDD3S4R434 201 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 TRBV6-7A0A0A0MS04 114 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 ST8SIA3O43173 380 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 TSPAN2O60636 221 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 HPNP05981 417 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 SLC35E2P0CK97 266 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 SFTPDP35247 375 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 RPS18P62269 152 aaKnown RBP8.82□□□□□ -1
PDGFRB-207ENST00000520579 TMEM177Q53S58 311 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 LGI3Q8N145 548 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 STPG4Q8N801 248 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 OR1P1Q8NH06 330 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 NAT6Q93015 286 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 MS4A10Q96PG2 267 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 RPP25Q9BUL9 199 aaKnown RBP8.82□□□□□ -1
PDGFRB-207ENST00000520579 TMED7-TICAM2A0A0A6YYA0 188 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 OR7C2O60412 319 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 BGLAPP02818 100 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 ASAH2BP0C7U1 165 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 ZNF728P0DKX0 622 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 EGR1P18146 543 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 PGCP20142 388 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 OR10J1P30954 320 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 HNRNPA3P51991 378 aaKnown RBP8.82□□□□□ -1
PDGFRB-207ENST00000520579 CXorf66Q5JRM2 361 aaPredicted RBP8.82□□□□□ -1
PDGFRB-207ENST00000520579 FDX2Q6P4F2 183 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 CNKSR3Q6P9H4 555 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 Q6ZN92 141 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 OR13D1Q8NGV5 346 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 MIEN1Q9BRT3 115 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 RSG1Q9BU20 258 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 PLEKHA2Q9HB19 425 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 PATZ1Q9HBE1 687 aaKnown RBP8.82□□□□□ -1
PDGFRB-207ENST00000520579 RYDENQ9NUL5 291 aaKnown RBP8.82□□□□□ -1
PDGFRB-207ENST00000520579 ZNF107Q9UII5 783 aaPredicted RBP8.82□□□□□ -1
PDGFRB-207ENST00000520579 NSG2Q9Y328 171 aa8.82□□□□□ -1
PDGFRB-207ENST00000520579 ZNF816-ZNF321PA0A0X1KG74 233 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 NKX2-6A6NCS4 301 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 POU2F2P09086 479 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 TDGF1P13385 188 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 MFAP5Q13361 173 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 RAB31Q13636 194 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 LRRC75AQ8NAA5 344 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 AGBL5Q8NDL9 886 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 BOD1Q96IK1 185 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 PCGF1Q9BSM1 259 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 IGFLR1Q9H665 355 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 G6PC2Q9NQR9 355 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 POLR3KQ9Y2Y1 108 aaPredicted RBP8.81□□□□□ -1
PDGFRB-207ENST00000520579 PRRC2CQ9Y520 2896 aaKnown RBP8.81□□□□□ -1
PDGFRB-207ENST00000520579 C3orf80F5H4A9 247 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 CEBPDP49716 269 aaPredicted RBP8.81□□□□□ -1
PDGFRB-207ENST00000520579 DYNLT3P51808 116 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 ZNF121P58317 390 aaPredicted RBP8.81□□□□□ -1
PDGFRB-207ENST00000520579 HLA-DRB3P79483 266 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 TMEM52BQ4KMG9 183 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 LINC00114Q6XXX2 140 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 BOD1L2Q8IYS8 172 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 OR4X1Q8NH49 305 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 KCNG3Q8TAE7 436 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 ZNF319Q9P2F9 582 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 MCTS1Q9ULC4 181 aaKnown RBP8.81□□□□□ -1
PDGFRB-207ENST00000520579 COL4A6Q14031 1691 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 HSD17B6O14756 317 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 SRP19P09132 144 aaKnown RBP8.81□□□□□ -1
PDGFRB-207ENST00000520579 IAPPP10997 89 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 PAX1P15863 534 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 FCARP24071 287 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 FAM3BP58499 235 aaPredicted RBP8.81□□□□□ -1
PDGFRB-207ENST00000520579 EWSR1Q01844 656 aaKnown RBP eCLIP8.81□□□□□ -1
PDGFRB-207ENST00000520579 SRSF4Q08170 494 aaKnown RBP8.81□□□□□ -1
PDGFRB-207ENST00000520579 ENDOGQ14249 297 aaKnown RBP8.81□□□□□ -1
PDGFRB-207ENST00000520579 EMG1Q92979 244 aaKnown RBP8.81□□□□□ -1
PDGFRB-207ENST00000520579 C8orf44Q96CB5 159 aa8.81□□□□□ -1
PDGFRB-207ENST00000520579 FAM103A1Q9BTL3 118 aaKnown RBP8.81□□□□□ -1
PDGFRB-207ENST00000520579 A0A1W2PNR3 127 aa8.8□□□□□ -1
PDGFRB-207ENST00000520579 DEFA4P12838 97 aa8.8□□□□□ -1
PDGFRB-207ENST00000520579 FAM3AP98173 230 aa8.8□□□□□ -1
PDGFRB-207ENST00000520579 PLCXD2Q0VAA5 305 aa8.8□□□□□ -1
PDGFRB-207ENST00000520579 HYAL1Q12794 435 aa8.8□□□□□ -1
PDGFRB-207ENST00000520579 ORAOV1Q8WV07 137 aa8.8□□□□□ -1
PDGFRB-207ENST00000520579 SYT3Q9BQG1 590 aa8.8□□□□□ -1
PDGFRB-207ENST00000520579 KIR3DX1Q9H7L2 352 aa8.8□□□□□ -1
PDGFRB-207ENST00000520579 LRRK1Q38SD2 2015 aa8.8□□□□□ -1
PDGFRB-207ENST00000520579 P2RY1P47900 373 aa8.8□□□□□ -1
PDGFRB-207ENST00000520579 RAB9AP51151 201 aa8.8□□□□□ -1
PDGFRB-207ENST00000520579 IL22RA1Q8N6P7 574 aa8.8□□□□□ -1
PDGFRB-207ENST00000520579 DTWD2Q8NBA8 298 aa8.8□□□□□ -1
PDGFRB-207ENST00000520579 PLK3Q9H4B4 646 aa8.8□□□□□ -1
PDGFRB-207ENST00000520579 IGLV1-36A0A0B4J1U3 117 aa8.8□□□□□ -1
PDGFRB-207ENST00000520579 GRIFINA4D1Z8 144 aa8.8□□□□□ -1
PDGFRB-207ENST00000520579 TLCD2A6NGC4 264 aa8.8□□□□□ -1
PDGFRB-207ENST00000520579 RNF212BA8MTL3 300 aa8.8□□□□□ -1
PDGFRB-207ENST00000520579 IGFBP3P17936 291 aaPredicted RBP8.8□□□□□ -1
PDGFRB-207ENST00000520579 HERV-K104P61576 105 aa8.8□□□□□ -1
PDGFRB-207ENST00000520579 TMEM41BQ5BJD5 291 aa8.8□□□□□ -1
PDGFRB-207ENST00000520579 UEVLDQ8IX04 471 aa8.8□□□□□ -1
PDGFRB-207ENST00000520579 GTSF1LQ9H1H1 148 aa8.8□□□□□ -1
PDGFRB-207ENST00000520579 ERRFI1Q9UJM3 462 aaPredicted RBP8.8□□□□□ -1
PDGFRB-207ENST00000520579 STAG3L2P0CL84 134 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms