RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 OR51E1Q8TCB6 317 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 PAPOLGQ9BWT3 736 aaKnown RBP5.61□□□□□ -1.51
SDCBP-208ENST00000520228 BEX2Q9BXY8 128 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 MOB1AQ9H8S9 216 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 LPAR2Q9HBW0 351 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 GPR84Q9NQS5 396 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 UFSP2Q9NUQ7 469 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 UBAP1Q9NZ09 502 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 NUFIP1Q9UHK0 495 aaKnown RBP5.61□□□□□ -1.51
SDCBP-208ENST00000520228 OR52A1Q9UKL2 312 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 SNX5Q9Y5X3 404 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 R4GMQ9 66 aa5.61□□□□□ -1.51
SDCBP-208ENST00000520228 SONP18583 2426 aaKnown RBP5.6□□□□□ -1.51
SDCBP-208ENST00000520228 FN1P02751 2386 aaKnown RBP5.6□□□□□ -1.51
SDCBP-208ENST00000520228 MED13LQ71F56 2210 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 ARFGEF3Q5TH69 2177 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 PPIAL4EA0A075B759 164 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 DAPL1A0PJW8 107 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 ZNF850A8MQ14 1090 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 PPIAL4DF5H284 164 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 J3QRE1 110 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 DLGAP1O14490 977 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 SRSF10O75494 262 aaKnown RBP5.6□□□□□ -1.51
SDCBP-208ENST00000520228 MTRF1O75570 445 aaKnown RBP5.6□□□□□ -1.51
SDCBP-208ENST00000520228 PTBP3O95758 552 aaKnown RBP5.6□□□□□ -1.51
SDCBP-208ENST00000520228 FADS2O95864 444 aaKnown RBP5.6□□□□□ -1.51
SDCBP-208ENST00000520228 IGHV2-5P01817 119 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 MSMBP08118 114 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 PPIAL4FP0DN26 164 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 ATP6V1B1P15313 513 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 PCMT1P22061 227 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 ACKR3P25106 362 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 BMXP51813 675 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 MTCP1P56278 107 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 ELF3P78545 371 aaPredicted RBP5.6□□□□□ -1.51
SDCBP-208ENST00000520228 RIPPLY1Q0D2K3 151 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 PRDX4Q13162 271 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 CHRFAM7AQ494W8 412 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 TMEM155Q4W5P6 130 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 LBHQ53QV2 105 aaPredicted RBP5.6□□□□□ -1.51
SDCBP-208ENST00000520228 ZNF684Q5T5D7 378 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 OGFRL1Q5TC84 451 aaPredicted RBP5.6□□□□□ -1.51
SDCBP-208ENST00000520228 TTC23Q5W5X9 447 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 FAM220AQ7Z4H9 259 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 ELMOD2Q8IZ81 293 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 ACBD7Q8N6N7 88 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 KLHDC1Q8N7A1 406 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 OR51F2Q8NH61 342 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 CYGBQ8WWM9 190 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 PIGCQ92535 297 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 ITFG2Q969R8 447 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 TMEM186Q96B77 213 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 MICU1Q9BPX6 476 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 VCXQ9H320 206 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 DCLRE1BQ9H816 532 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 AMBNQ9NP70 447 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 ABCB9Q9NP78 766 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 C1orf123Q9NWV4 160 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 CACNG5Q9UF02 275 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 GNG8Q9UK08 70 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 EXOGQ9Y2C4 368 aaKnown RBP5.6□□□□□ -1.51
SDCBP-208ENST00000520228 RPL36Q9Y3U8 105 aaKnown RBP5.6□□□□□ -1.51
SDCBP-208ENST00000520228 PPIAL4AQ9Y536 164 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 MPC1Q9Y5U8 109 aa5.6□□□□□ -1.51
SDCBP-208ENST00000520228 ZNF816-ZNF321PA0A0X1KG74 233 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 CCL24O00175 119 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 CASQ2O14958 399 aaPredicted RBP5.59□□□□□ -1.51
SDCBP-208ENST00000520228 FSTL3O95633 263 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 CLIC3O95833 236 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 IGLV3-1P01715 115 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 TTRP02766 147 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 DBTP11182 482 aaKnown RBP5.59□□□□□ -1.51
SDCBP-208ENST00000520228 HNF1AP20823 631 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 ADARB1P78563 741 aaKnown RBP5.59□□□□□ -1.51
SDCBP-208ENST00000520228 ZNF85Q03923 595 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 SLC34A1Q06495 639 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 RAB40BQ12829 278 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 TMEM187Q14656 261 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 KCNJ8Q15842 424 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 CEACAM21Q3KPI0 293 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 TP53I3Q53FA7 332 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 FAM201AQ5SY85 155 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 FAM120AOSQ5T036 256 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 ZNF691Q5VV52 312 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 FAHD2BQ6P2I3 314 aaPredicted RBP5.59□□□□□ -1.51
SDCBP-208ENST00000520228 ZNF826PQ6ZT77 177 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 BTN2A1Q7KYR7 527 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 NRARPQ7Z6K4 114 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 CATSPERDQ86XM0 798 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 DHRSXQ8N5I4 330 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 NKAIN3Q8N8D7 197 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 DEFB108BQ8NET1 73 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 OR1M1Q8NGA1 313 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 OR10G8Q8NGN5 311 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 APH1BQ8WW43 257 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 OR5P3Q8WZ94 311 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 RORBQ92753 470 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 MRPL48Q96GC5 212 aaKnown RBP5.59□□□□□ -1.51
SDCBP-208ENST00000520228 FAHD2AQ96GK7 314 aa5.59□□□□□ -1.51
SDCBP-208ENST00000520228 RNF170Q96K19 258 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms