RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 NUAK2Q9H093 628 aa4.8□□□□□ -1.64
PABPC1-207ENST00000518716 TLNRD1Q9H1K6 362 aa4.8□□□□□ -1.64
PABPC1-207ENST00000518716 GEMIN7Q9H840 131 aaKnown RBP4.8□□□□□ -1.64
PABPC1-207ENST00000518716 GAR1Q9NY12 217 aaKnown RBP4.8□□□□□ -1.64
PABPC1-207ENST00000518716 NOP16Q9Y3C1 178 aaKnown RBP4.8□□□□□ -1.64
PABPC1-207ENST00000518716 RYR1P21817 5038 aa4.8□□□□□ -1.64
PABPC1-207ENST00000518716 PCLOQ9Y6V0 5065 aa4.8□□□□□ -1.64
PABPC1-207ENST00000518716 E9PQ18 207 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 NDUFB3O43676 98 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 ANGPTL7O43827 346 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 CCDC22O60826 627 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 KHDRBS3O75525 346 aaKnown RBP4.79□□□□□ -1.64
PABPC1-207ENST00000518716 KDM4BO94953 1096 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 ATP6V1G2O95670 118 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 TXNDC12O95881 172 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 GASTP01350 101 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 IFNGP01579 166 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 CHRM2P08172 466 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 SLC2A1P11166 492 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 DBTP11182 482 aaKnown RBP4.79□□□□□ -1.64
PABPC1-207ENST00000518716 CDKN2AP42771 156 aaKnown RBP4.79□□□□□ -1.64
PABPC1-207ENST00000518716 VEGFCP49767 419 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 NKX2-5P52952 324 aaPredicted RBP4.79□□□□□ -1.64
PABPC1-207ENST00000518716 MFAP4P55083 255 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 CAV3P56539 151 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 MTPNP58546 118 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 FXYD6P3P58550 94 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 ESRRGP62508 458 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 ECH1Q13011 328 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 IL18R1Q13478 541 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 CYP51A1Q16850 503 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 DGUOKQ16854 277 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 MICBQ29980 383 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 SNAI3Q3KNW1 292 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 PAN3Q58A45 887 aaKnown RBP4.79□□□□□ -1.64
PABPC1-207ENST00000518716 LCE1AQ5T7P2 110 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 OR2G6Q5TZ20 316 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 TMPRSS11FQ6ZWK6 438 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 SLC36A1Q7Z2H8 476 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 RNF144BQ7Z419 303 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 TSEN54Q7Z6J9 526 aaKnown RBP4.79□□□□□ -1.64
PABPC1-207ENST00000518716 CENPVQ7Z7K6 275 aaPredicted RBP4.79□□□□□ -1.64
PABPC1-207ENST00000518716 OAFQ86UD1 273 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 NRMQ8IXM6 262 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 FAM89BQ8N5H3 189 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 SLC26A10Q8NG04 563 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 OR5AU1Q8NGC0 362 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 OR51G2Q8NGK0 314 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 OR5D13Q8NGL4 314 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 OR5M8Q8NGP6 311 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 MUC7Q8TAX7 377 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 SPRYD4Q8WW59 207 aaPredicted RBP4.79□□□□□ -1.64
PABPC1-207ENST00000518716 DAZAP1Q96EP5 407 aaKnown RBP4.79□□□□□ -1.64
PABPC1-207ENST00000518716 TSSK2Q96PF2 358 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 GAFA1Q96PS6 74 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 GPX7Q96SL4 187 aaPredicted RBP4.79□□□□□ -1.64
PABPC1-207ENST00000518716 C2orf88Q9BSF0 95 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 ADAT1Q9BUB4 502 aaKnown RBP4.79□□□□□ -1.64
PABPC1-207ENST00000518716 PARD6GQ9BYG4 376 aaPredicted RBP4.79□□□□□ -1.64
PABPC1-207ENST00000518716 SYT4Q9H2B2 425 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 CCDC167Q9P0B6 97 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 UBQLN2Q9UHD9 624 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 TCF19Q9Y242 345 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 ALMS1Q8TCU4 4167 aa4.79□□□□□ -1.64
PABPC1-207ENST00000518716 A0A087WUU8 490 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 A0A1B0GTI1 187 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 A0A1B0GV72 72 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 FAM90A22PA8MWA6 464 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 A8MZ25 164 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 EFCAB9A8MZ26 197 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 LINC00587B1AMM8 73 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 F5H5K5 113 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 LOC110117498-PIK3R3F6TDL0 507 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 TCAPO15273 167 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 SIGLEC5O15389 551 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 SYNGR1O43759 233 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 PRKYO43930 277 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 NXPH2O95156 264 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 OR2C1O95371 312 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 TFF1P04155 84 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 LCATP04180 440 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 GRPP07492 148 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 OR1E2P47887 323 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 DYNLT3P51808 116 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 SLC18A1P54219 525 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 CD81P60033 236 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 PSME3P61289 254 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 PITPNAQ00169 270 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 ST3GAL3Q11203 375 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 TATDN3Q17R31 274 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 RFX4Q33E94 735 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 ZBED5Q49AG3 693 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 LRRC10Q5BKY1 277 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 RABL3Q5HYI8 236 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 DHFR2Q86XF0 187 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 MKXQ8IYA7 352 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 OR6V1Q8N148 313 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 OR1M1Q8NGA1 313 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 OR9Q1Q8NGQ5 310 aa4.78□□□□□ -1.64
PABPC1-207ENST00000518716 OR10A6Q8NH74 314 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms