RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 FAM3AP98173 230 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 UBE2V1Q13404 147 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 IFI44LQ53G44 452 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 FAM76BQ5HYJ3 339 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 PAGE3Q5JUK9 113 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 OTPQ5XKR4 325 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 ZNF730Q6ZMV8 503 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 MBOAT2Q6ZWT7 520 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 SLC16A9Q7RTY1 509 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 ZNF329Q86UD4 541 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 RTN4RL2Q86UN3 420 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 NAA40Q86UY6 237 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 ZDHHC21Q8IVQ6 265 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 SGPP2Q8IWX5 399 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 AQP12AQ8IXF9 295 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 BATF2Q8N1L9 274 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 ZNF596Q8TC21 504 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 C4orf3Q8WVX3 66 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 REEP6Q96HR9 211 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 ZNF714Q96N38 554 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 SH3GL1Q99961 368 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 FNDC11Q9BVV2 318 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 NSRP1Q9H0G5 558 aaKnown RBP4.74□□□□□ -1.65
CCDC6-203ENST00000518638 ANKRD19PQ9H560 264 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 DNAJC4Q9NNZ3 241 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 ADA2Q9NZK5 511 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 CCDC167Q9P0B6 97 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 DPM3Q9P2X0 92 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 LAMP5Q9UJQ1 280 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 B9D1Q9UPM9 204 aa4.74□□□□□ -1.65
CCDC6-203ENST00000518638 IGHV2-26A0A0B4J1V2 119 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 hCG_38984A0A1B0GV85 526 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 OR5B21A6NL26 309 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 LEUTXA8MZ59 168 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 OOSP1A8MZH6 123 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 SLC22A2O15244 555 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 FGF16O43320 207 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 MTRF1O75570 445 aaKnown RBP4.73□□□□□ -1.65
CCDC6-203ENST00000518638 DIRAS3O95661 229 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 CST4P01036 141 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 FAM106CPP0CH98 169 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 GP9P14770 177 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 HSD11B1P28845 292 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 KIR3DL2P43630 455 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 GPR4P46093 362 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 GNG3P63215 75 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 MEF2CQ06413 473 aaPredicted RBP4.73□□□□□ -1.65
CCDC6-203ENST00000518638 EIF2B1Q14232 305 aaKnown RBP4.73□□□□□ -1.65
CCDC6-203ENST00000518638 ZNF585BQ52M93 769 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 LCN1P1Q5VSP4 162 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 OR52W1Q6IF63 320 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 ERICH5Q6P6B1 374 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 NRARPQ7Z6K4 114 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 SLC35E3Q7Z769 313 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 FAM71E2Q8N5Q1 922 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 FAM86B1Q8N7N1 296 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 ZNF676Q8N7Q3 588 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 OR5P3Q8WZ94 311 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 RPL3LQ92901 407 aaKnown RBP4.73□□□□□ -1.65
CCDC6-203ENST00000518638 TSSK2Q96PF2 358 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 CGREF1Q99674 301 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 NRIP2Q9BQI9 281 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 KAT8Q9H7Z6 458 aaKnown RBP4.73□□□□□ -1.65
CCDC6-203ENST00000518638 VIPAS39Q9H9C1 493 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 ISYNA1Q9NPH2 558 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 FAM212BQ9NTI7 297 aaPredicted RBP4.73□□□□□ -1.65
CCDC6-203ENST00000518638 FAM118AQ9NWS6 357 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 RCC2Q9P258 522 aaKnown RBP4.73□□□□□ -1.65
CCDC6-203ENST00000518638 CD300AQ9UGN4 299 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 SIGLEC7Q9Y286 467 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 IER3IP1Q9Y5U9 82 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 STARD9Q9P2P6 4700 aa4.73□□□□□ -1.65
CCDC6-203ENST00000518638 HERC2O95714 4834 aa4.72□□□□□ -1.65
CCDC6-203ENST00000518638 A0A087WUU8 490 aa4.72□□□□□ -1.65
CCDC6-203ENST00000518638 A0A1W2PPK0 400 aa4.72□□□□□ -1.65
CCDC6-203ENST00000518638 hADV38S2A0JD32 116 aa4.72□□□□□ -1.65
CCDC6-203ENST00000518638 RFPL4AA6NLU0 287 aa4.72□□□□□ -1.65
CCDC6-203ENST00000518638 RFPL4AL1F8VTS6 287 aa4.72□□□□□ -1.65
CCDC6-203ENST00000518638 F8WDY8 70 aa4.72□□□□□ -1.65
CCDC6-203ENST00000518638 DCTN6O00399 190 aa4.72□□□□□ -1.65
CCDC6-203ENST00000518638 CDC42EP2O14613 210 aa4.72□□□□□ -1.65
CCDC6-203ENST00000518638 ARPC3O15145 178 aa4.72□□□□□ -1.65
CCDC6-203ENST00000518638 SNNO75324 88 aaPredicted RBP4.72□□□□□ -1.65
CCDC6-203ENST00000518638 LY6G6CO95867 125 aa4.72□□□□□ -1.65
CCDC6-203ENST00000518638 SERPINA1P01009 418 aa4.72□□□□□ -1.65
CCDC6-203ENST00000518638 FCGR1AP12314 374 aa4.72□□□□□ -1.65
CCDC6-203ENST00000518638 PRDX2P32119 198 aa4.72□□□□□ -1.65
CCDC6-203ENST00000518638 OR1E2P47887 323 aa4.72□□□□□ -1.65
CCDC6-203ENST00000518638 POU3F4P49335 361 aa4.72□□□□□ -1.65
CCDC6-203ENST00000518638 DLX6P56179 175 aa4.72□□□□□ -1.65
CCDC6-203ENST00000518638 MTPNP58546 118 aa4.72□□□□□ -1.65
CCDC6-203ENST00000518638 CBX1P83916 185 aa4.72□□□□□ -1.65
CCDC6-203ENST00000518638 BDH1Q02338 343 aa4.72□□□□□ -1.65
CCDC6-203ENST00000518638 PRDX4Q13162 271 aa4.72□□□□□ -1.65
CCDC6-203ENST00000518638 LDLRAD2Q5SZI1 272 aa4.72□□□□□ -1.65
CCDC6-203ENST00000518638 SMARCD3Q6STE5 483 aa4.72□□□□□ -1.65
CCDC6-203ENST00000518638 DLEU7Q6UYE1 221 aa4.72□□□□□ -1.65
CCDC6-203ENST00000518638 ACP7Q6ZNF0 438 aa4.72□□□□□ -1.65
CCDC6-203ENST00000518638 C18orf65Q6ZTR6 163 aa4.72□□□□□ -1.65
CCDC6-203ENST00000518638 GDPD3Q7L5L3 318 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms