RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 FAM27D1Q5T7N8 215 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 LINC01590Q5TEZ4 76 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 C9orf135Q5VTT2 229 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 DMRTA1Q5VZB9 504 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 MBNL2Q5VZF2 373 aaKnown RBP2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 ZNF57Q68EA5 555 aaPredicted RBP2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 MZT2AQ6P582 158 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 ZNF322Q6U7Q0 402 aaPredicted RBP2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 LYPD4Q6UWN0 246 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 DRAM2Q6UX65 266 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 LRRN1Q6UXK5 716 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 FBXW12Q6X9E4 464 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 KRT74Q7RTS7 529 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 MDP1Q86V88 176 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 LRRC28Q86X40 367 aaPredicted RBP2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 KLBQ86Z14 1044 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 ZNF584Q8IVC4 421 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 GID4Q8IVV7 300 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 CLRN3Q8NCR9 226 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 CPEB3Q8NE35 698 aaKnown RBP2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 C19orf18Q8NEA5 215 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 SLC30A7Q8NEW0 376 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 BBS1Q8NFJ9 593 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 DMBX1Q8NFW5 382 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 OR5L1Q8NGL2 311 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 OR2AJ1Q8NGZ0 328 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 OR4K13Q8NH42 304 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 OR1S1Q8NH92 325 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 OR1F12Q8NHA8 337 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 SCARB1Q8WTV0 552 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 RNF133Q8WVZ7 376 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 SPRYD4Q8WW59 207 aaPredicted RBP2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 GATAD2BQ8WXI9 593 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 ACOT12Q8WYK0 555 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 C11orf40Q8WZ69 217 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 ST8SIA2Q92186 375 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 SPTSSAQ969W0 71 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 ST6GALNAC6Q969X2 333 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 APOBEC3DQ96AK3 386 aaPredicted RBP2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 KCTD12Q96CX2 325 aaKnown RBP2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 RASD2Q96D21 266 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 HAVCR1Q96D42 359 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 OR2A7Q96R45 310 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 DIRC2Q96SL1 478 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 TEAD3Q99594 435 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 GFI1Q99684 422 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 C7orf50Q9BRJ6 194 aaKnown RBP2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 ZNF436Q9C0F3 470 aaPredicted RBP2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 WNT5BQ9H1J7 359 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 ABCG5Q9H222 651 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 RGCCQ9H4X1 137 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 IFT22Q9H7X7 185 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 SEC61A2Q9H9S3 476 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 SCPEP1Q9HB40 452 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 NOX3Q9HBY0 568 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 SRA1Q9HD15 236 aaKnown RBP2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 NKIRAS2Q9NYR9 191 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 TVP23BQ9NYZ1 205 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 H2AFY2Q9P0M6 372 aaPredicted RBP2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 MGAT4CQ9UBM8 478 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 ADAM30Q9UKF2 790 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 APLNQ9ULZ1 77 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 ING4Q9UNL4 249 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 COA3Q9Y2R0 106 aaPredicted RBP2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 NOP16Q9Y3C1 178 aaKnown RBP2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 MAB21L2Q9Y586 359 aa2.48□□□□□ -2.01
SCARNA13-201ENST00000516672 IGLV2-18A0A075B6J9 118 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 LOC100509620A0A075B734 347 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 A0A0B4J203 849 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 CENPVL3A0A0U1RRI6 287 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 TMEM272A0A1B0GTI8 110 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 A0A1B0GWJ7 208 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 PQLC2LA1A4F0 135 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 C5orf49A4QMS7 147 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 ZNF503-AS2A6NEH8 195 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 A6NIN4 97 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 HMSDA8MTL9 139 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 SEC14L6B5MCN3 397 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 KRBOX1C9JBD0 128 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 MCRIP1C9JLW8 97 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 ZNF878C9JN71 531 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 E9PI62 339 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 IFNL4K9M1U5 179 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 M0R233 179 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 AIPO00170 330 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 LGALS8O00214 317 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 DCTN6O00399 190 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 CTDSPLO15194 276 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 RER1O15258 196 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 SIGLEC5O15389 551 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 GMDSO60547 372 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 FSTL3O95633 263 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 HLA-DQA2P01906 255 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 MT-ND4P03905 459 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 HLA-DPB1P04440 258 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 IL5P05113 134 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 FCER2P06734 321 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 CD3GP09693 182 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 OR2T7P0C7T2 308 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 RAC2P15153 192 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms