RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 CMYA5Q8N3K9 4069 aa10.94□□□□□ -0.66
TCOF1-215ENST00000515516 J3QR06 171 aa10.94□□□□□ -0.66
TCOF1-215ENST00000515516 M0QZK8 103 aa10.94□□□□□ -0.66
TCOF1-215ENST00000515516 XPNPEP2O43895 674 aa10.94□□□□□ -0.66
TCOF1-215ENST00000515516 GTF2F2P13984 249 aa10.94□□□□□ -0.66
TCOF1-215ENST00000515516 GZMHP20718 246 aa10.94□□□□□ -0.66
TCOF1-215ENST00000515516 TAS2R43P59537 309 aa10.94□□□□□ -0.66
TCOF1-215ENST00000515516 ST3GAL4Q11206 333 aa10.94□□□□□ -0.66
TCOF1-215ENST00000515516 RCN1Q15293 331 aa10.94□□□□□ -0.66
TCOF1-215ENST00000515516 Q499Y3 187 aa10.94□□□□□ -0.66
TCOF1-215ENST00000515516 ABCA11PQ4W5N1 156 aa10.94□□□□□ -0.66
TCOF1-215ENST00000515516 ATAD3CQ5T2N8 411 aa10.94□□□□□ -0.66
TCOF1-215ENST00000515516 RSBN1Q5VWQ0 802 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-215ENST00000515516 Q6ZS46 218 aa10.94□□□□□ -0.66
TCOF1-215ENST00000515516 SLC16A12Q6ZSM3 486 aa10.94□□□□□ -0.66
TCOF1-215ENST00000515516 C8orf59Q8N0T1 100 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-215ENST00000515516 STX19Q8N4C7 294 aa10.94□□□□□ -0.66
TCOF1-215ENST00000515516 OR5AU1Q8NGC0 362 aa10.94□□□□□ -0.66
TCOF1-215ENST00000515516 OR10A7Q8NGE5 316 aa10.94□□□□□ -0.66
TCOF1-215ENST00000515516 RFESDQ8TAC1 157 aa10.94□□□□□ -0.66
TCOF1-215ENST00000515516 NEK7Q8TDX7 302 aa10.94□□□□□ -0.66
TCOF1-215ENST00000515516 ZNF184Q99676 751 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-215ENST00000515516 OCSTAMPQ9BR26 566 aa10.94□□□□□ -0.66
TCOF1-215ENST00000515516 SIRT4Q9Y6E7 314 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-215ENST00000515516 TMEM30CPA0ZSE6 113 aa10.93□□□□□ -0.66
TCOF1-215ENST00000515516 G3V4G9 280 aa10.93□□□□□ -0.66
TCOF1-215ENST00000515516 LY6LH3BQJ8 138 aa10.93□□□□□ -0.66
TCOF1-215ENST00000515516 GEMIN2O14893 280 aaKnown RBP10.93□□□□□ -0.66
TCOF1-215ENST00000515516 IGHV3-7P01780 117 aa10.93□□□□□ -0.66
TCOF1-215ENST00000515516 LPLP06858 475 aa10.93□□□□□ -0.66
TCOF1-215ENST00000515516 CGB3P0DN86 165 aa10.93□□□□□ -0.66
TCOF1-215ENST00000515516 CGB7P0DN87 165 aa10.93□□□□□ -0.66
TCOF1-215ENST00000515516 GNG10P50151 68 aa10.93□□□□□ -0.66
TCOF1-215ENST00000515516 RAB7AP51149 207 aa10.93□□□□□ -0.66
TCOF1-215ENST00000515516 RBM11P57052 281 aaKnown RBP10.93□□□□□ -0.66
TCOF1-215ENST00000515516 ADARB1P78563 741 aaKnown RBP10.93□□□□□ -0.66
TCOF1-215ENST00000515516 PAX5Q02548 391 aa10.93□□□□□ -0.66
TCOF1-215ENST00000515516 MADCAM1Q13477 382 aa10.93□□□□□ -0.66
TCOF1-215ENST00000515516 MPV17LQ2QL34 196 aa10.93□□□□□ -0.66
TCOF1-215ENST00000515516 TMEM95Q3KNT9 176 aa10.93□□□□□ -0.66
TCOF1-215ENST00000515516 SLC22A6Q4U2R8 563 aa10.93□□□□□ -0.66
TCOF1-215ENST00000515516 NHLRC3Q5JS37 347 aa10.93□□□□□ -0.66
TCOF1-215ENST00000515516 C9orf152Q5JTZ5 239 aa10.93□□□□□ -0.66
TCOF1-215ENST00000515516 DMKNQ6E0U4 476 aaPredicted RBP10.93□□□□□ -0.66
TCOF1-215ENST00000515516 ZFP41Q8N8Y5 198 aa10.93□□□□□ -0.66
TCOF1-215ENST00000515516 OR13C5Q8NGS8 318 aa10.93□□□□□ -0.66
TCOF1-215ENST00000515516 OR10X1Q8NGY0 326 aa10.93□□□□□ -0.66
TCOF1-215ENST00000515516 PLPPR1Q8TBJ4 325 aa10.93□□□□□ -0.66
TCOF1-215ENST00000515516 GGHQ92820 318 aa10.93□□□□□ -0.66
TCOF1-215ENST00000515516 LEAP2Q969E1 77 aa10.93□□□□□ -0.66
TCOF1-215ENST00000515516 VCXQ9H320 206 aa10.93□□□□□ -0.66
TCOF1-215ENST00000515516 IFT22Q9H7X7 185 aa10.93□□□□□ -0.66
TCOF1-215ENST00000515516 LINC00574Q9H8X3 128 aa10.93□□□□□ -0.66
TCOF1-215ENST00000515516 CNOT2Q9NZN8 540 aaKnown RBP10.93□□□□□ -0.66
TCOF1-215ENST00000515516 TRBV5-5A0A0J9YX44 114 aa10.92□□□□□ -0.66
TCOF1-215ENST00000515516 TCRBV4S1A1TA0A5B7 111 aa10.92□□□□□ -0.66
TCOF1-215ENST00000515516 NPIPB11E5RHQ5 1161 aa10.92□□□□□ -0.66
TCOF1-215ENST00000515516 MYL12BO14950 172 aa10.92□□□□□ -0.66
TCOF1-215ENST00000515516 GPX5O75715 221 aa10.92□□□□□ -0.66
TCOF1-215ENST00000515516 LALBAP00709 142 aa10.92□□□□□ -0.66
TCOF1-215ENST00000515516 IGFBP3P17936 291 aaPredicted RBP10.92□□□□□ -0.66
TCOF1-215ENST00000515516 CAPGP40121 348 aa10.92□□□□□ -0.66
TCOF1-215ENST00000515516 HES1Q14469 280 aa10.92□□□□□ -0.66
TCOF1-215ENST00000515516 THNSL2Q86YJ6 484 aa10.92□□□□□ -0.66
TCOF1-215ENST00000515516 JAGN1Q8N5M9 183 aa10.92□□□□□ -0.66
TCOF1-215ENST00000515516 OR4X2Q8NGF9 303 aa10.92□□□□□ -0.66
TCOF1-215ENST00000515516 ORAI1Q96D31 301 aa10.92□□□□□ -0.66
TCOF1-215ENST00000515516 SPACA1Q9HBV2 294 aa10.92□□□□□ -0.66
TCOF1-215ENST00000515516 PSG11Q9UQ72 335 aa10.92□□□□□ -0.66
TCOF1-215ENST00000515516 MOB4Q9Y3A3 225 aa10.92□□□□□ -0.66
TCOF1-215ENST00000515516 TET2Q6N021 2002 aaPredicted RBP10.91□□□□□ -0.66
TCOF1-215ENST00000515516 TRAV39A0A0B4J263 110 aa10.91□□□□□ -0.66
TCOF1-215ENST00000515516 PNMA8CA0A1B0GUJ8 204 aa10.91□□□□□ -0.66
TCOF1-215ENST00000515516 A0A1W2PRX2 142 aa10.91□□□□□ -0.66
TCOF1-215ENST00000515516 MCRIP1C9JLW8 97 aa10.91□□□□□ -0.66
TCOF1-215ENST00000515516 PF4V1P10720 104 aa10.91□□□□□ -0.66
TCOF1-215ENST00000515516 SSTR5P35346 364 aa10.91□□□□□ -0.66
TCOF1-215ENST00000515516 OR8H3Q8N146 312 aa10.91□□□□□ -0.66
TCOF1-215ENST00000515516 DRAM1Q8N682 238 aa10.91□□□□□ -0.66
TCOF1-215ENST00000515516 BPIFB6Q8NFQ5 453 aa10.91□□□□□ -0.66
TCOF1-215ENST00000515516 OR56B4Q8NH76 319 aa10.91□□□□□ -0.66
TCOF1-215ENST00000515516 WIPF2Q8TF74 440 aaPredicted RBP10.91□□□□□ -0.66
TCOF1-215ENST00000515516 CCDC107Q8WV48 283 aa10.91□□□□□ -0.66
TCOF1-215ENST00000515516 THRSPQ92748 146 aa10.91□□□□□ -0.66
TCOF1-215ENST00000515516 ARL11Q969Q4 196 aa10.91□□□□□ -0.66
TCOF1-215ENST00000515516 MUL1Q969V5 352 aa10.91□□□□□ -0.66
TCOF1-215ENST00000515516 MRPS24Q96EL2 167 aaKnown RBP10.91□□□□□ -0.66
TCOF1-215ENST00000515516 RAB9BQ9NP90 201 aa10.91□□□□□ -0.66
TCOF1-215ENST00000515516 ERGIC3Q9Y282 383 aa10.91□□□□□ -0.66
TCOF1-215ENST00000515516 MRPS28Q9Y2Q9 187 aaKnown RBP10.91□□□□□ -0.66
TCOF1-215ENST00000515516 A0A1W2PPK0 400 aa10.9□□□□□ -0.66
TCOF1-215ENST00000515516 SDCBPO00560 298 aaPredicted RBP10.9□□□□□ -0.66
TCOF1-215ENST00000515516 MAS1P04201 325 aa10.9□□□□□ -0.66
TCOF1-215ENST00000515516 SNRNP70P08621 437 aaKnown RBP10.9□□□□□ -0.66
TCOF1-215ENST00000515516 TMEM11P17152 192 aa10.9□□□□□ -0.66
TCOF1-215ENST00000515516 FSTP19883 344 aa10.9□□□□□ -0.66
TCOF1-215ENST00000515516 IL3RAP26951 378 aa10.9□□□□□ -0.66
TCOF1-215ENST00000515516 MAPK3P27361 379 aaPredicted RBP10.9□□□□□ -0.66
TCOF1-215ENST00000515516 WNT4P56705 351 aa10.9□□□□□ -0.66
TCOF1-215ENST00000515516 CD83Q01151 205 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms