RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 KIF25Q9UIL4 384 aa13.95□□□□□ -0.18
AP3S1-208ENST00000515066 ANKRD20A5PA0PJZ0 165 aa13.94□□□□□ -0.18
AP3S1-208ENST00000515066 VWC2LB2RUY7 222 aa13.94□□□□□ -0.18
AP3S1-208ENST00000515066 RCC1P18754 421 aaPredicted RBP13.94□□□□□ -0.18
AP3S1-208ENST00000515066 DNASE1P24855 282 aa13.94□□□□□ -0.18
AP3S1-208ENST00000515066 CBX5P45973 191 aa13.94□□□□□ -0.18
AP3S1-208ENST00000515066 MRPS15P82914 257 aaKnown RBP13.94□□□□□ -0.18
AP3S1-208ENST00000515066 KLF9Q13886 244 aaPredicted RBP13.94□□□□□ -0.18
AP3S1-208ENST00000515066 EDDM3AQ14507 147 aa13.94□□□□□ -0.18
AP3S1-208ENST00000515066 KRBOX4Q5JUW0 171 aa13.94□□□□□ -0.18
AP3S1-208ENST00000515066 C16orf87Q6PH81 154 aa13.94□□□□□ -0.18
AP3S1-208ENST00000515066 HOGA1Q86XE5 327 aa13.94□□□□□ -0.18
AP3S1-208ENST00000515066 SPICQ8N5J4 248 aa13.94□□□□□ -0.18
AP3S1-208ENST00000515066 LURAP1Q96LR2 239 aa13.94□□□□□ -0.18
AP3S1-208ENST00000515066 ST6GALNAC5Q9BVH7 336 aa13.94□□□□□ -0.18
AP3S1-208ENST00000515066 RIMS4Q9H426 269 aaPredicted RBP13.94□□□□□ -0.18
AP3S1-208ENST00000515066 Q9N2K0 584 aa13.94□□□□□ -0.18
AP3S1-208ENST00000515066 MBNL3Q9NUK0 354 aaKnown RBP13.94□□□□□ -0.18
AP3S1-208ENST00000515066 TBC1D24Q9ULP9 559 aa13.94□□□□□ -0.18
AP3S1-208ENST00000515066 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.93□□□□□ -0.189e-10■■■■■ 36.7
AP3S1-208ENST00000515066 ITPR3Q14573 2671 aa13.93□□□□□ -0.18
AP3S1-208ENST00000515066 TRAV39A0A0B4J263 110 aa13.93□□□□□ -0.18
AP3S1-208ENST00000515066 TMEM30CPA0ZSE6 113 aa13.93□□□□□ -0.18
AP3S1-208ENST00000515066 F5H0A9 414 aaPredicted RBP13.93□□□□□ -0.18
AP3S1-208ENST00000515066 WNT2P09544 360 aa13.93□□□□□ -0.18
AP3S1-208ENST00000515066 RPS2P15880 293 aaKnown RBP13.93□□□□□ -0.18
AP3S1-208ENST00000515066 ERP29P30040 261 aaKnown RBP13.93□□□□□ -0.18
AP3S1-208ENST00000515066 RCVRNP35243 200 aa13.93□□□□□ -0.18
AP3S1-208ENST00000515066 P2RX3P56373 397 aa13.93□□□□□ -0.18
AP3S1-208ENST00000515066 SEC61A1P61619 476 aaKnown RBP13.93□□□□□ -0.18
AP3S1-208ENST00000515066 CLEC2AQ6UVW9 174 aa13.93□□□□□ -0.18
AP3S1-208ENST00000515066 LRRC75A-AS1Q8N1F1 130 aa13.93□□□□□ -0.18
AP3S1-208ENST00000515066 BEST4Q8NFU0 473 aa13.93□□□□□ -0.18
AP3S1-208ENST00000515066 NINJ1Q92982 152 aa13.93□□□□□ -0.18
AP3S1-208ENST00000515066 IFT46Q9NQC8 304 aa13.93□□□□□ -0.18
AP3S1-208ENST00000515066 MIOXQ9UGB7 285 aa13.93□□□□□ -0.18
AP3S1-208ENST00000515066 ZANQ9Y493 2812 aa13.92□□□□□ -0.18
AP3S1-208ENST00000515066 CR1P17927 2039 aa13.92□□□□□ -0.18
AP3S1-208ENST00000515066 IGHV4-30-2A0A087WSY4 118 aa13.92□□□□□ -0.18
AP3S1-208ENST00000515066 ODAMA1E959 279 aa13.92□□□□□ -0.18
AP3S1-208ENST00000515066 NDUFS8O00217 210 aa13.92□□□□□ -0.18
AP3S1-208ENST00000515066 PLA2G10O15496 165 aa13.92□□□□□ -0.18
AP3S1-208ENST00000515066 Q6ZS49 121 aa13.92□□□□□ -0.18
AP3S1-208ENST00000515066 GDPD3Q7L5L3 318 aa13.92□□□□□ -0.18
AP3S1-208ENST00000515066 TCF23Q7RTU1 214 aa13.92□□□□□ -0.18
AP3S1-208ENST00000515066 C5orf24Q7Z6I8 188 aa13.92□□□□□ -0.18
AP3S1-208ENST00000515066 CCDC107Q8WV48 283 aa13.92□□□□□ -0.18
AP3S1-208ENST00000515066 ZFAND2BQ8WV99 257 aa13.92□□□□□ -0.18
AP3S1-208ENST00000515066 DCTN5Q9BTE1 182 aa13.92□□□□□ -0.18
AP3S1-208ENST00000515066 PATZ1Q9HBE1 687 aaKnown RBP13.92□□□□□ -0.18
AP3S1-208ENST00000515066 CHMP1AQ9HD42 196 aaPredicted RBP13.92□□□□□ -0.18
AP3S1-208ENST00000515066 ZNF107Q9UII5 783 aaPredicted RBP13.92□□□□□ -0.18
AP3S1-208ENST00000515066 EDARQ9UNE0 448 aa13.92□□□□□ -0.18
AP3S1-208ENST00000515066 MEIKINA0A087WXM9 373 aa13.91□□□□□ -0.18
AP3S1-208ENST00000515066 MEX3AA1L020 520 aaKnown RBP13.91□□□□□ -0.18
AP3S1-208ENST00000515066 POM121CA8CG34 1229 aa13.91□□□□□ -0.18
AP3S1-208ENST00000515066 NDUFB3O43676 98 aa13.91□□□□□ -0.18
AP3S1-208ENST00000515066 CD3DP04234 171 aa13.91□□□□□ -0.18
AP3S1-208ENST00000515066 EDDM3BP56851 147 aa13.91□□□□□ -0.18
AP3S1-208ENST00000515066 SRSF7Q16629 238 aaKnown RBP eCLIP13.91□□□□□ -0.18
AP3S1-208ENST00000515066 LRRC10Q5BKY1 277 aa13.91□□□□□ -0.18
AP3S1-208ENST00000515066 TOMM5Q8N4H5 51 aa13.91□□□□□ -0.18
AP3S1-208ENST00000515066 OR4D10Q8NGI6 311 aa13.91□□□□□ -0.18
AP3S1-208ENST00000515066 OR13A1Q8NGR1 328 aa13.91□□□□□ -0.18
AP3S1-208ENST00000515066 NEIL1Q96FI4 390 aaPredicted RBP13.91□□□□□ -0.18
AP3S1-208ENST00000515066 PIMREGQ9BSJ6 248 aa13.91□□□□□ -0.18
AP3S1-208ENST00000515066 MYO9AB2RTY4 2548 aa13.91□□□□□ -0.18
AP3S1-208ENST00000515066 ZNF469Q96JG9 3925 aaPredicted RBP13.91□□□□□ -0.18
AP3S1-208ENST00000515066 H7C1Q1 480 aa13.91□□□□□ -0.18
AP3S1-208ENST00000515066 IGHV2-5P01817 119 aa13.91□□□□□ -0.18
AP3S1-208ENST00000515066 CD74P04233 296 aa13.91□□□□□ -0.18
AP3S1-208ENST00000515066 CSF1P09603 554 aa13.91□□□□□ -0.18
AP3S1-208ENST00000515066 NDUFB7P17568 137 aa13.91□□□□□ -0.18
AP3S1-208ENST00000515066 HLA-DMAP28067 261 aa13.91□□□□□ -0.18
AP3S1-208ENST00000515066 ZNF57Q68EA5 555 aaPredicted RBP13.91□□□□□ -0.18
AP3S1-208ENST00000515066 KRTAP1-3Q8IUG1 177 aa13.91□□□□□ -0.18
AP3S1-208ENST00000515066 TMEM229BQ8NBD8 167 aa13.91□□□□□ -0.18
AP3S1-208ENST00000515066 OR8B3Q8NGG8 313 aa13.91□□□□□ -0.18
AP3S1-208ENST00000515066 OR8B2Q96RD0 313 aa13.91□□□□□ -0.18
AP3S1-208ENST00000515066 NCOR1P1Q9H4R4 102 aa13.91□□□□□ -0.18
AP3S1-208ENST00000515066 TAS2R8Q9NYW2 309 aa13.91□□□□□ -0.18
AP3S1-208ENST00000515066 TRAPPC2LQ9UL33 140 aa13.91□□□□□ -0.18
AP3S1-208ENST00000515066 LINC00854A0A1B0GVQ3 168 aa13.9□□□□□ -0.18
AP3S1-208ENST00000515066 HRH1P35367 487 aa13.9□□□□□ -0.18
AP3S1-208ENST00000515066 LMO4P61968 165 aa13.9□□□□□ -0.18
AP3S1-208ENST00000515066 HERPUD1Q15011 391 aa13.9□□□□□ -0.18
AP3S1-208ENST00000515066 CLEC12BQ2HXU8 276 aa13.9□□□□□ -0.18
AP3S1-208ENST00000515066 WDR25Q64LD2 544 aaPredicted RBP13.9□□□□□ -0.18
AP3S1-208ENST00000515066 FAAP20Q6NZ36 180 aa13.9□□□□□ -0.18
AP3S1-208ENST00000515066 MOB1BQ7L9L4 216 aa13.9□□□□□ -0.18
AP3S1-208ENST00000515066 NLRC3Q7RTR2 1065 aa13.9□□□□□ -0.18
AP3S1-208ENST00000515066 CLDND2Q8NHS1 167 aa13.9□□□□□ -0.18
AP3S1-208ENST00000515066 SETD6Q8TBK2 473 aa13.9□□□□□ -0.18
AP3S1-208ENST00000515066 C19orf12Q9NSK7 152 aa13.9□□□□□ -0.18
AP3S1-208ENST00000515066 ANXA10Q9UJ72 324 aa13.9□□□□□ -0.18
AP3S1-208ENST00000515066 PCDHB10Q9UN67 800 aa13.9□□□□□ -0.18
AP3S1-208ENST00000515066 IGHV4-61A0A0C4DH41 118 aa13.89□□□□□ -0.19
AP3S1-208ENST00000515066 ZNF736B4DX44 427 aaPredicted RBP13.89□□□□□ -0.19
AP3S1-208ENST00000515066 DSCR9P59020 149 aa13.89□□□□□ -0.19
AP3S1-208ENST00000515066 TAS2R19P59542 299 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms