RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 SPNP16150 400 aa2.11□□□□□ -2.07
HMGCS1-207ENST00000514610 ETV1P50549 477 aa2.11□□□□□ -2.07
HMGCS1-207ENST00000514610 RHOAP61586 193 aa2.11□□□□□ -2.07
HMGCS1-207ENST00000514610 BSXQ3C1V8 233 aa2.11□□□□□ -2.07
HMGCS1-207ENST00000514610 ZCWPW2Q504Y3 356 aa2.11□□□□□ -2.07
HMGCS1-207ENST00000514610 TMPPEQ6ZT21 453 aa2.11□□□□□ -2.07
HMGCS1-207ENST00000514610 TMEM25Q86YD3 366 aa2.11□□□□□ -2.07
HMGCS1-207ENST00000514610 MSRB3Q8IXL7 192 aa2.11□□□□□ -2.07
HMGCS1-207ENST00000514610 OR11G2Q8NGC1 345 aa2.11□□□□□ -2.07
HMGCS1-207ENST00000514610 LMX1AQ8TE12 382 aa2.11□□□□□ -2.07
HMGCS1-207ENST00000514610 CASTOR1Q8WTX7 329 aa2.11□□□□□ -2.07
HMGCS1-207ENST00000514610 TMIGD2Q96BF3 282 aa2.11□□□□□ -2.07
HMGCS1-207ENST00000514610 PGLYRP3Q96LB9 341 aa2.11□□□□□ -2.07
HMGCS1-207ENST00000514610 OR8B2Q96RD0 313 aa2.11□□□□□ -2.07
HMGCS1-207ENST00000514610 TAPBPLQ9BX59 468 aa2.11□□□□□ -2.07
HMGCS1-207ENST00000514610 GOLPH3Q9H4A6 298 aa2.11□□□□□ -2.07
HMGCS1-207ENST00000514610 ENPP5Q9UJA9 477 aa2.11□□□□□ -2.07
HMGCS1-207ENST00000514610 STK38LQ9Y2H1 464 aa2.11□□□□□ -2.07
HMGCS1-207ENST00000514610 LINC00588Q9Y4M8 146 aa2.11□□□□□ -2.07
HMGCS1-207ENST00000514610 YLPM1P49750 1951 aaKnown RBP2.1□□□□□ -2.07
HMGCS1-207ENST00000514610 LOC100506127A0A0U1RQW1 187 aa2.1□□□□□ -2.07
HMGCS1-207ENST00000514610 F8VP50 259 aa2.1□□□□□ -2.07
HMGCS1-207ENST00000514610 RNASEK-C17orf49H0YIS7 233 aa2.1□□□□□ -2.07
HMGCS1-207ENST00000514610 I3L4J1 428 aa2.1□□□□□ -2.07
HMGCS1-207ENST00000514610 SH2D1AO60880 128 aa2.1□□□□□ -2.07
HMGCS1-207ENST00000514610 SOX14O95416 240 aa2.1□□□□□ -2.07
HMGCS1-207ENST00000514610 OR10A3P58181 314 aa2.1□□□□□ -2.07
HMGCS1-207ENST00000514610 TPBGQ13641 420 aa2.1□□□□□ -2.07
HMGCS1-207ENST00000514610 MMDQ15546 238 aa2.1□□□□□ -2.07
HMGCS1-207ENST00000514610 Q3ZCU0 254 aa2.1□□□□□ -2.07
HMGCS1-207ENST00000514610 C10orf91Q5T1B1 145 aa2.1□□□□□ -2.07
HMGCS1-207ENST00000514610 TCF24Q7RTU0 167 aa2.1□□□□□ -2.07
HMGCS1-207ENST00000514610 SCXQ7RTU7 201 aa2.1□□□□□ -2.07
HMGCS1-207ENST00000514610 KRTCAP2Q8N6L1 136 aa2.1□□□□□ -2.07
HMGCS1-207ENST00000514610 FER1L6-AS1Q8NA97 138 aa2.1□□□□□ -2.07
HMGCS1-207ENST00000514610 KCTD4Q8WVF5 259 aa2.1□□□□□ -2.07
HMGCS1-207ENST00000514610 C20orf166-AS1Q96NR2 134 aa2.1□□□□□ -2.07
HMGCS1-207ENST00000514610 ARL6Q9H0F7 186 aa2.1□□□□□ -2.07
HMGCS1-207ENST00000514610 SLC23A2Q9UGH3 650 aa2.1□□□□□ -2.07
HMGCS1-207ENST00000514610 RPUSD1Q9UJJ7 312 aaKnown RBP2.1□□□□□ -2.07
HMGCS1-207ENST00000514610 TRAV8-2A0A0B4J237 113 aa2.09□□□□□ -2.07
HMGCS1-207ENST00000514610 A0A1W2PRG6 482 aa2.09□□□□□ -2.07
HMGCS1-207ENST00000514610 POLR3GO15318 223 aaPredicted RBP2.09□□□□□ -2.07
HMGCS1-207ENST00000514610 DEDDO75618 318 aa2.09□□□□□ -2.07
HMGCS1-207ENST00000514610 EPPINO95925 133 aa2.09□□□□□ -2.07
HMGCS1-207ENST00000514610 PYCR1P32322 319 aa2.09□□□□□ -2.07
HMGCS1-207ENST00000514610 STX3Q13277 289 aa2.09□□□□□ -2.07
HMGCS1-207ENST00000514610 FAM162BQ5T6X4 162 aa2.09□□□□□ -2.07
HMGCS1-207ENST00000514610 NOXRED1Q6NXP6 359 aa2.09□□□□□ -2.07
HMGCS1-207ENST00000514610 OLIG3Q7RTU3 272 aa2.09□□□□□ -2.07
HMGCS1-207ENST00000514610 CLDN23Q96B33 292 aa2.09□□□□□ -2.07
HMGCS1-207ENST00000514610 STACQ99469 402 aa2.09□□□□□ -2.07
HMGCS1-207ENST00000514610 PRSS27Q9BQR3 290 aa2.09□□□□□ -2.07
HMGCS1-207ENST00000514610 FAAP24Q9BTP7 215 aa2.09□□□□□ -2.07
HMGCS1-207ENST00000514610 EBPLQ9BY08 206 aa2.09□□□□□ -2.07
HMGCS1-207ENST00000514610 ALX4Q9H161 411 aaPredicted RBP2.09□□□□□ -2.07
HMGCS1-207ENST00000514610 PHLDA3Q9Y5J5 127 aa2.09□□□□□ -2.07
HMGCS1-207ENST00000514610 URGCP-MRPS24S4R325 110 aa2.09□□□□□ -2.07
HMGCS1-207ENST00000514610 DOCK6Q96HP0 2047 aa2.08□□□□□ -2.08
HMGCS1-207ENST00000514610 ARAP3Q8WWN8 1544 aa2.08□□□□□ -2.08
HMGCS1-207ENST00000514610 FGF16O43320 207 aa2.08□□□□□ -2.08
HMGCS1-207ENST00000514610 LDOC1O95751 146 aaPredicted RBP2.08□□□□□ -2.08
HMGCS1-207ENST00000514610 APOA1P02647 267 aa2.08□□□□□ -2.08
HMGCS1-207ENST00000514610 TPM1P09493 284 aa2.08□□□□□ -2.08
HMGCS1-207ENST00000514610 PSMB9P28065 219 aa2.08□□□□□ -2.08
HMGCS1-207ENST00000514610 KCNJ3P48549 501 aa2.08□□□□□ -2.08
HMGCS1-207ENST00000514610 MP68P56378 58 aa2.08□□□□□ -2.08
HMGCS1-207ENST00000514610 PYCR3Q53H96 274 aa2.08□□□□□ -2.08
HMGCS1-207ENST00000514610 OR10J3Q5JRS4 329 aa2.08□□□□□ -2.08
HMGCS1-207ENST00000514610 HES3Q5TGS1 186 aa2.08□□□□□ -2.08
HMGCS1-207ENST00000514610 SSX7Q7RTT5 188 aa2.08□□□□□ -2.08
HMGCS1-207ENST00000514610 ACBD4Q8NC06 268 aa2.08□□□□□ -2.08
HMGCS1-207ENST00000514610 FAM45AQ8TCE6 357 aa2.08□□□□□ -2.08
HMGCS1-207ENST00000514610 MRPL16Q9NX20 251 aaKnown RBP2.08□□□□□ -2.08
HMGCS1-207ENST00000514610 A0A1B0GX12 115 aa2.07□□□□□ -2.08
HMGCS1-207ENST00000514610 FABP7O15540 132 aa2.07□□□□□ -2.08
HMGCS1-207ENST00000514610 SGCEO43556 437 aa2.07□□□□□ -2.08
HMGCS1-207ENST00000514610 BRI3O95415 125 aa2.07□□□□□ -2.08
HMGCS1-207ENST00000514610 GYPCP04921 128 aa2.07□□□□□ -2.08
HMGCS1-207ENST00000514610 GUSBP08236 651 aa2.07□□□□□ -2.08
HMGCS1-207ENST00000514610 PSKH1P11801 424 aa2.07□□□□□ -2.08
HMGCS1-207ENST00000514610 CBR1P16152 277 aa2.07□□□□□ -2.08
HMGCS1-207ENST00000514610 CBX5P45973 191 aa2.07□□□□□ -2.08
HMGCS1-207ENST00000514610 PSMD8P48556 350 aa2.07□□□□□ -2.08
HMGCS1-207ENST00000514610 CST6Q15828 149 aa2.07□□□□□ -2.08
HMGCS1-207ENST00000514610 ZNF181Q2M3W8 571 aa2.07□□□□□ -2.08
HMGCS1-207ENST00000514610 PDCD6IPQ8WUM4 868 aaKnown RBP2.07□□□□□ -2.08
HMGCS1-207ENST00000514610 IFT81Q8WYA0 676 aa2.07□□□□□ -2.08
HMGCS1-207ENST00000514610 METTL8Q9H825 291 aaKnown RBP2.07□□□□□ -2.08
HMGCS1-207ENST00000514610 KCNIP2Q9NS61 270 aa2.07□□□□□ -2.08
HMGCS1-207ENST00000514610 KMT2EQ8IZD2 1858 aa2.07□□□□□ -2.08
HMGCS1-207ENST00000514610 IGKV1-12A0A0C4DH73 117 aa2.06□□□□□ -2.08
HMGCS1-207ENST00000514610 ARGFXA6NJG6 315 aa2.06□□□□□ -2.08
HMGCS1-207ENST00000514610 G3V3Q6 166 aa2.06□□□□□ -2.08
HMGCS1-207ENST00000514610 J3QLI3 93 aa2.06□□□□□ -2.08
HMGCS1-207ENST00000514610 EEF1E1O43324 174 aaKnown RBP2.06□□□□□ -2.08
HMGCS1-207ENST00000514610 LTAP01374 205 aa2.06□□□□□ -2.08
HMGCS1-207ENST00000514610 IGKV1D-12P01611 117 aa2.06□□□□□ -2.08
HMGCS1-207ENST00000514610 OR12D1P0DN82 309 aa2.06□□□□□ -2.08
HMGCS1-207ENST00000514610 C1QTNF8P60827 252 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms