RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 RAB3CQ96E17 227 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 FAHD2AQ96GK7 314 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 SPACA5Q96QH8 159 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 OR8B2Q96RD0 313 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 NICN1Q9BSH3 213 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 SHARPINQ9H0F6 387 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 OR51J1Q9H342 316 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 RANGRFQ9HD47 186 aaPredicted RBP6.93□□□□□ -1.3
CCL28-204ENST00000514421 ING3Q9NXR8 418 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 RASL12Q9NYN1 266 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 LPAR3Q9UBY5 353 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 CDC42EP3Q9UKI2 254 aa6.93□□□□□ -1.3
CCL28-204ENST00000514421 IGHV3OR15-7A0A075B7D8 119 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 MEIKINA0A087WXM9 373 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 FAM230AA0A1W2PPH8 454 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 FAM90A10PA6NDY2 464 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 FAM90A18PA6NE21 464 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 FAM90A16PA6NEW6 464 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 FAM90A20PA6NIJ5 464 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 FAM90A8PA6NJQ4 464 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 FAM90A7PA6NKC0 464 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 FAM90A22PA8MWA6 464 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 FAM90A12PA8MX19 464 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 FAM90A5PA8MXJ8 464 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 A8MXK9 166 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 FAM90A23PA8MXZ1 464 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 ZNF736B4DX44 427 aaPredicted RBP6.92□□□□□ -1.3
CCL28-204ENST00000514421 TRAPPC2LH3BP13 241 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 J3QLI3 93 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 J3QT63 122 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 SOCS1O15524 211 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 ADAM20O43506 726 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 NOS1APO75052 506 aaPredicted RBP6.92□□□□□ -1.3
CCL28-204ENST00000514421 CRTAPO75718 401 aaPredicted RBP6.92□□□□□ -1.3
CCL28-204ENST00000514421 RHBDL1O75783 438 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 RAB3DO95716 219 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 MPIG6BO95866 241 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 GYPAP02724 150 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 FAM90A15PP0C7V4 464 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 FAM90A13PP0C7W8 464 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 FAM90A14PP0C7W9 464 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 FAM90A24PP0C7X0 464 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 HOXB4P17483 251 aaPredicted RBP6.92□□□□□ -1.3
CCL28-204ENST00000514421 EGR1P18146 543 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 GLRA1P23415 457 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 GATA3P23771 443 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 VEGFCP49767 419 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 NPY4RP50391 375 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 ATP1B3P54709 279 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 MTCP1P56278 107 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 SEC61A1P61619 476 aaKnown RBP6.92□□□□□ -1.3
CCL28-204ENST00000514421 GNB2P62879 340 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 LCN2P80188 198 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 HOXA4Q00056 320 aaPredicted RBP6.92□□□□□ -1.3
CCL28-204ENST00000514421 PDZK1IP1Q13113 114 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 CDK10Q15131 360 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 ZFP69Q49AA0 526 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 ACTBL2Q562R1 376 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 NHLRC3Q5JS37 347 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 VAX1Q5SQQ9 334 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 FAM120AOSQ5T036 256 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 WDR25Q64LD2 544 aaPredicted RBP6.92□□□□□ -1.3
CCL28-204ENST00000514421 ZNF626Q68DY1 528 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 ELP2Q6IA86 826 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 ZNF841Q6ZN19 808 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 FAM90A1Q86YD7 464 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 OR11H7Q8NGC8 314 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 TNFAIP8L1Q8WVP5 186 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 BORCS8Q96FH0 119 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 GPER1Q99527 375 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 PKIBQ9C010 78 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 SELENOIQ9C0D9 397 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 METTL9Q9H1A3 318 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 MED28Q9H204 178 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 PCDHB16Q9NRJ7 776 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 KAAG1Q9UBP8 84 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 DNAJB11Q9UBS4 358 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 CLN8Q9UBY8 286 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 ELF5Q9UKW6 265 aaPredicted RBP6.92□□□□□ -1.3
CCL28-204ENST00000514421 POLDIP2Q9Y2S7 368 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 ARHGAP32A7KAX9 2087 aa6.92□□□□□ -1.3
CCL28-204ENST00000514421 LOC105371242A0A075B767 164 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 KIR2DS1A0A191URI9 304 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 A0A1W2PP11 408 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.91□□□□□ -1.3
CCL28-204ENST00000514421 ARPC1BO15143 372 aaKnown RBP6.91□□□□□ -1.3
CCL28-204ENST00000514421 PHF1O43189 567 aaPredicted RBP6.91□□□□□ -1.3
CCL28-204ENST00000514421 OR2A4O95047 310 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 GNB3P16520 340 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 HNF1AP20823 631 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 ERP29P30040 261 aaKnown RBP6.91□□□□□ -1.3
CCL28-204ENST00000514421 GMFBP60983 142 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 IL24Q13007 206 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 FCN2Q15485 313 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 SLC22A6Q4U2R8 563 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 DCAF12L2Q5VW00 463 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 FAAP20Q6NZ36 180 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 ZNF782Q6ZMW2 699 aaPredicted RBP6.91□□□□□ -1.3
CCL28-204ENST00000514421 TRAPPC6BQ86SZ2 158 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 NOXA1Q86UR1 476 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms