RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 TBX15Q96SF7 602 aa9.31□□□□□ -0.92
HTT-213ENST00000513806 PLEKHJ1Q9NW61 149 aa9.31□□□□□ -0.92
HTT-213ENST00000513806 ABRACLQ9P1F3 81 aa9.31□□□□□ -0.92
HTT-213ENST00000513806 SPATA2Q9UM82 520 aa9.31□□□□□ -0.92
HTT-213ENST00000513806 FN1P02751 2386 aaKnown RBP9.31□□□□□ -0.92
HTT-213ENST00000513806 A0A0G2JMP0 313 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 A0A0X1KG70 313 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 CTDSP2O14595 271 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 ECDO95905 644 aaPredicted RBP9.3□□□□□ -0.92
HTT-213ENST00000513806 MT-ND4P03905 459 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 LIPFP07098 398 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 IGHV4-38-2P0DP08 117 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 MMP9P14780 707 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 ELK1P19419 428 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 CDK2P24941 298 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 FAM120AOSQ5T036 256 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 PRAMEF5Q5TYX0 476 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 BTNL3Q6UXE8 466 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 ZNF497Q6ZNH5 498 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 VMO1Q7Z5L0 202 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 CROCCP3Q8IVE0 287 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 C11orf42Q8N5U0 333 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 OR4M2Q8NGB6 313 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 OR56B1Q8NGI3 324 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 SETD6Q8TBK2 473 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 MRPL30Q8TCC3 161 aaKnown RBP9.3□□□□□ -0.92
HTT-213ENST00000513806 MAFIPQ8WZ33 124 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 GCDHQ92947 438 aaPredicted RBP9.3□□□□□ -0.92
HTT-213ENST00000513806 RAB3CQ96E17 227 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 BCL7BQ9BQE9 202 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 SIRPDQ9H106 197 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 MIXL1Q9H2W2 232 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 ETV7Q9Y603 341 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 AUP1Q9Y679 476 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 HIVEP2P31629 2446 aa9.3□□□□□ -0.92
HTT-213ENST00000513806 NSD1Q96L73 2696 aaPredicted RBP9.29□□□□□ -0.92
HTT-213ENST00000513806 TRAV18A0A075B6X5 111 aa9.29□□□□□ -0.92
HTT-213ENST00000513806 TRBV23-1A0A0A0MS06 115 aa9.29□□□□□ -0.92
HTT-213ENST00000513806 hADV38S2A0JD32 116 aa9.29□□□□□ -0.92
HTT-213ENST00000513806 TMEM30CPA0ZSE6 113 aa9.29□□□□□ -0.92
HTT-213ENST00000513806 TMEM235A6NFC5 223 aa9.29□□□□□ -0.92
HTT-213ENST00000513806 MFNGO00587 321 aa9.29□□□□□ -0.92
HTT-213ENST00000513806 GPR37O15354 613 aa9.29□□□□□ -0.92
HTT-213ENST00000513806 TOX4O94842 621 aa9.29□□□□□ -0.92
HTT-213ENST00000513806 IGHV3-7P01780 117 aa9.29□□□□□ -0.92
HTT-213ENST00000513806 CSN2P05814 226 aa9.29□□□□□ -0.92
HTT-213ENST00000513806 FCER2P06734 321 aa9.29□□□□□ -0.92
HTT-213ENST00000513806 RCC1P18754 421 aaPredicted RBP9.29□□□□□ -0.92
HTT-213ENST00000513806 ERP29P30040 261 aaKnown RBP9.29□□□□□ -0.92
HTT-213ENST00000513806 SSTR5P35346 364 aa9.29□□□□□ -0.92
HTT-213ENST00000513806 C17orf58Q2M2W7 97 aa9.29□□□□□ -0.92
HTT-213ENST00000513806 CDNFQ49AH0 187 aa9.29□□□□□ -0.92
HTT-213ENST00000513806 KLF17Q5JT82 389 aaPredicted RBP9.29□□□□□ -0.92
HTT-213ENST00000513806 UBE2NLQ5JXB2 153 aa9.29□□□□□ -0.92
HTT-213ENST00000513806 RUSC1-AS1Q66K80 236 aa9.29□□□□□ -0.92
HTT-213ENST00000513806 SLC35E4Q6ICL7 350 aa9.29□□□□□ -0.92
HTT-213ENST00000513806 RFESDQ8TAC1 157 aa9.29□□□□□ -0.92
HTT-213ENST00000513806 LHX4Q969G2 390 aa9.29□□□□□ -0.92
HTT-213ENST00000513806 PTX4Q96A99 478 aa9.29□□□□□ -0.92
HTT-213ENST00000513806 ZNF714Q96N38 554 aa9.29□□□□□ -0.92
HTT-213ENST00000513806 WDFY2Q96P53 400 aa9.29□□□□□ -0.92
HTT-213ENST00000513806 MRI1Q9BV20 369 aa9.29□□□□□ -0.92
HTT-213ENST00000513806 SLIRPQ9GZT3 109 aaKnown RBP9.29□□□□□ -0.92
HTT-213ENST00000513806 SPACA1Q9HBV2 294 aa9.29□□□□□ -0.92
HTT-213ENST00000513806 CHMP1AQ9HD42 196 aaPredicted RBP9.29□□□□□ -0.92
HTT-213ENST00000513806 CCDC59Q9P031 241 aaKnown RBP9.29□□□□□ -0.92
HTT-213ENST00000513806 ZNF230Q9UIE0 474 aaPredicted RBP9.29□□□□□ -0.92
HTT-213ENST00000513806 MTORP42345 2549 aa9.29□□□□□ -0.92
HTT-213ENST00000513806 IGHV3-43A0A0B4J1X8 118 aa9.28□□□□□ -0.92
HTT-213ENST00000513806 TRAV40A0A0B4J280 105 aa9.28□□□□□ -0.92
HTT-213ENST00000513806 SMIM31A0A1B0GVY4 71 aa9.28□□□□□ -0.92
HTT-213ENST00000513806 METTL21EPA6NDL7 271 aa9.28□□□□□ -0.92
HTT-213ENST00000513806 MEIS3P1A6NDR6 274 aa9.28□□□□□ -0.92
HTT-213ENST00000513806 A6NHS1 94 aa9.28□□□□□ -0.92
HTT-213ENST00000513806 FAM25AB3EWG3 89 aa9.28□□□□□ -0.92
HTT-213ENST00000513806 FAM25CB3EWG5 89 aa9.28□□□□□ -0.92
HTT-213ENST00000513806 FAM25GB3EWG6 89 aa9.28□□□□□ -0.92
HTT-213ENST00000513806 ZNF728P0DKX0 622 aa9.28□□□□□ -0.92
HTT-213ENST00000513806 IGHV3-43DP0DP04 118 aa9.28□□□□□ -0.92
HTT-213ENST00000513806 HIST1H1DP16402 221 aaKnown RBP9.28□□□□□ -0.92
HTT-213ENST00000513806 HOXB4P17483 251 aaPredicted RBP9.28□□□□□ -0.92
HTT-213ENST00000513806 COX7A1P24310 79 aa9.28□□□□□ -0.92
HTT-213ENST00000513806 PAX6P26367 422 aa9.28□□□□□ -0.92
HTT-213ENST00000513806 SOX6P35712 828 aa9.28□□□□□ -0.92
HTT-213ENST00000513806 GUCA2AQ02747 115 aa9.28□□□□□ -0.92
HTT-213ENST00000513806 MEF2CQ06413 473 aaPredicted RBP9.28□□□□□ -0.92
HTT-213ENST00000513806 RBM39Q14498 530 aaKnown RBP9.28□□□□□ -0.92
HTT-213ENST00000513806 ZNF260Q3ZCT1 412 aa9.28□□□□□ -0.92
HTT-213ENST00000513806 RNASE12Q5GAN4 147 aaKnown RBP9.28□□□□□ -0.92
HTT-213ENST00000513806 BRD3OSQ6XYD6 125 aa9.28□□□□□ -0.92
HTT-213ENST00000513806 LAX1Q8IWV1 398 aa9.28□□□□□ -0.92
HTT-213ENST00000513806 PRR18Q8N4B5 295 aa9.28□□□□□ -0.92
HTT-213ENST00000513806 OR1L1Q8NH94 360 aa9.28□□□□□ -0.92
HTT-213ENST00000513806 NUDCD2Q8WVJ2 157 aa9.28□□□□□ -0.92
HTT-213ENST00000513806 C22orf15Q8WYQ4 148 aa9.28□□□□□ -0.92
HTT-213ENST00000513806 LEAP2Q969E1 77 aa9.28□□□□□ -0.92
HTT-213ENST00000513806 KCTD12Q96CX2 325 aaKnown RBP9.28□□□□□ -0.92
HTT-213ENST00000513806 CMSS1Q9BQ75 279 aaKnown RBP9.28□□□□□ -0.92
HTT-213ENST00000513806 SUCNR1Q9BXA5 334 aa9.28□□□□□ -0.92
HTT-213ENST00000513806 C6orf62Q9GZU0 229 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms