RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 NRASP01111 189 aa13.89□□□□□ -0.19
HMGCL-209ENST00000513148 BTF3P20290 206 aaKnown RBP13.89□□□□□ -0.19
HMGCL-209ENST00000513148 CD200P41217 278 aa13.89□□□□□ -0.19
HMGCL-209ENST00000513148 MRPS11P82912 194 aaKnown RBP13.89□□□□□ -0.19
HMGCL-209ENST00000513148 SSBP1Q04837 148 aaKnown RBP13.89□□□□□ -0.19
HMGCL-209ENST00000513148 MAPK1IP1LQ8NDC0 245 aa13.89□□□□□ -0.19
HMGCL-209ENST00000513148 RXFP4Q8TDU9 374 aa13.89□□□□□ -0.19
HMGCL-209ENST00000513148 TSEN15Q8WW01 171 aaKnown RBP13.89□□□□□ -0.19
HMGCL-209ENST00000513148 HPSE2Q8WWQ2 592 aa13.89□□□□□ -0.19
HMGCL-209ENST00000513148 SMIM19Q96E16 107 aa13.89□□□□□ -0.19
HMGCL-209ENST00000513148 KLK11Q9UBX7 282 aa13.89□□□□□ -0.19
HMGCL-209ENST00000513148 PCDHB10Q9UN67 800 aa13.89□□□□□ -0.19
HMGCL-209ENST00000513148 FOXJ3Q9UPW0 622 aa13.89□□□□□ -0.19
HMGCL-209ENST00000513148 A6NLC8 198 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 IFITM5A6NNB3 132 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 GPM6AP51674 278 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 PDZK1IP1Q13113 114 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 SPNS3Q6ZMD2 512 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 Q6ZSR3 168 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 WDR86Q86TI4 376 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 CBLN2Q8IUK8 224 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 C15orf54Q8N8G6 183 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 NPRL2Q8WTW4 380 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 CCDC107Q8WV48 283 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 OR5P3Q8WZ94 311 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 SLC25A38Q96DW6 304 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 ADAT3Q96EY9 351 aaPredicted RBP13.88□□□□□ -0.19
HMGCL-209ENST00000513148 HIST1H2AAQ96QV6 131 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 MICU1Q9BPX6 476 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 RTL8AQ9BWD3 113 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 FGF23Q9GZV9 251 aaPredicted RBP13.88□□□□□ -0.19
HMGCL-209ENST00000513148 MIOXQ9UGB7 285 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 TNFSF18Q9UNG2 199 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 TRAV14DV4A0A0A6YYC5 116 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 RNF222A6NCQ9 220 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 DHRS7CA6NNS2 312 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 GOSR2O14653 212 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 CSF1P09603 554 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 ZNF20P17024 532 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 ADCYAP1P18509 176 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 FAM74A1Q5RGS3 127 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 GLT8D1Q68CQ7 371 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 IL34Q6ZMJ4 242 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 CIARTQ8N365 385 aaPredicted RBP13.88□□□□□ -0.19
HMGCL-209ENST00000513148 OR13C5Q8NGS8 318 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 RGP1Q92546 391 aaPredicted RBP13.88□□□□□ -0.19
HMGCL-209ENST00000513148 FGGYQ96C11 551 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 TMEM106BQ9NUM4 274 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 DMRT1Q9Y5R6 373 aa13.88□□□□□ -0.19
HMGCL-209ENST00000513148 FLNAP21333 2647 aaKnown RBP13.88□□□□□ -0.19
HMGCL-209ENST00000513148 H7C1Q1 480 aa13.87□□□□□ -0.19
HMGCL-209ENST00000513148 NDUFS8O00217 210 aa13.87□□□□□ -0.19
HMGCL-209ENST00000513148 SMAD7O15105 426 aaKnown RBP13.87□□□□□ -0.19
HMGCL-209ENST00000513148 CYB5R3P00387 301 aaPredicted RBP13.87□□□□□ -0.19
HMGCL-209ENST00000513148 GPR6P46095 362 aaPredicted RBP13.87□□□□□ -0.19
HMGCL-209ENST00000513148 SOX2P48431 317 aa13.87□□□□□ -0.19
HMGCL-209ENST00000513148 ARHGDIBP52566 201 aa13.87□□□□□ -0.19
HMGCL-209ENST00000513148 BLOC1S1P78537 153 aa13.87□□□□□ -0.19
HMGCL-209ENST00000513148 HOXA4Q00056 320 aaPredicted RBP13.87□□□□□ -0.19
HMGCL-209ENST00000513148 MZT1Q08AG7 82 aa13.87□□□□□ -0.19
HMGCL-209ENST00000513148 HABP2Q14520 560 aaPredicted RBP13.87□□□□□ -0.19
HMGCL-209ENST00000513148 SMCO1Q147U7 214 aa13.87□□□□□ -0.19
HMGCL-209ENST00000513148 NKAPLQ5M9Q1 402 aa13.87□□□□□ -0.19
HMGCL-209ENST00000513148 MUC20Q8N307 709 aaPredicted RBP13.87□□□□□ -0.19
HMGCL-209ENST00000513148 ZNF561Q8N587 486 aa13.87□□□□□ -0.19
HMGCL-209ENST00000513148 RPS4Y2Q8TD47 263 aa13.87□□□□□ -0.19
HMGCL-209ENST00000513148 TNFAIP8L1Q8WVP5 186 aa13.87□□□□□ -0.19
HMGCL-209ENST00000513148 ARL11Q969Q4 196 aa13.87□□□□□ -0.19
HMGCL-209ENST00000513148 MTFP1Q9UDX5 166 aa13.87□□□□□ -0.19
HMGCL-209ENST00000513148 DHDHQ9UQ10 334 aa13.87□□□□□ -0.19
HMGCL-209ENST00000513148 COLCA2A8K830 154 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 C1orf196B1AJZ1 125 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 ZNF205O95201 554 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 BDKRB2P30411 391 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 SNRPEP62304 92 aaKnown RBP13.86□□□□□ -0.19
HMGCL-209ENST00000513148 ZNF154Q13106 437 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 C2orf68Q2NKX9 166 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 CEACAM21Q3KPI0 293 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 TMEM69Q5SWH9 247 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 TMEM42Q69YG0 159 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 ZNF826PQ6ZT77 177 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 ACOT7LQ6ZUV0 252 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 CCDC54Q8NEL0 328 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 STOML3Q8TAV4 291 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 FN3KRPQ9HA64 309 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 C1orf123Q9NWV4 160 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 ZNF732B4DXR9 585 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 RBBP9O75884 186 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 SLC25A16P16260 332 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 HLA-GP17693 338 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 SRMP19623 302 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 GATA4P43694 442 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 PEA15Q15121 130 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 FAM76BQ5HYJ3 339 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 DCAF12L2Q5VW00 463 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 OR1S2Q8NGQ3 325 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 EDARADDQ8WWZ3 215 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 TINAGL1Q9GZM7 467 aaPredicted RBP13.86□□□□□ -0.19
HMGCL-209ENST00000513148 CHST5Q9GZS9 411 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 SMCO4Q9NRQ5 59 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms