RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 P2RX3P56373 397 aa10.37□□□□□ -0.75
PDPN-210ENST00000513143 EDDM3BP56851 147 aa10.37□□□□□ -0.75
PDPN-210ENST00000513143 GNB2P62879 340 aa10.37□□□□□ -0.75
PDPN-210ENST00000513143 MRPS15P82914 257 aaKnown RBP10.37□□□□□ -0.75
PDPN-210ENST00000513143 GUCA2AQ02747 115 aa10.37□□□□□ -0.75
PDPN-210ENST00000513143 MEF2CQ06413 473 aaPredicted RBP10.37□□□□□ -0.75
PDPN-210ENST00000513143 EDDM3AQ14507 147 aa10.37□□□□□ -0.75
PDPN-210ENST00000513143 ZNF880Q6PDB4 577 aa10.37□□□□□ -0.75
PDPN-210ENST00000513143 Q6ZPA2 131 aa10.37□□□□□ -0.75
PDPN-210ENST00000513143 TPRX1Q8N7U7 411 aa10.37□□□□□ -0.75
PDPN-210ENST00000513143 MRPL30Q8TCC3 161 aaKnown RBP10.37□□□□□ -0.75
PDPN-210ENST00000513143 GPX8Q8TED1 209 aa10.37□□□□□ -0.75
PDPN-210ENST00000513143 TSC22D3Q99576 134 aa10.37□□□□□ -0.75
PDPN-210ENST00000513143 OCSTAMPQ9BR26 566 aa10.37□□□□□ -0.75
PDPN-210ENST00000513143 REG4Q9BYZ8 158 aa10.37□□□□□ -0.75
PDPN-210ENST00000513143 SRRQ9GZT4 340 aa10.37□□□□□ -0.75
PDPN-210ENST00000513143 ING3Q9NXR8 418 aa10.37□□□□□ -0.75
PDPN-210ENST00000513143 KIF25Q9UIL4 384 aa10.37□□□□□ -0.75
PDPN-210ENST00000513143 VPS13CQ709C8 3753 aa10.37□□□□□ -0.75
PDPN-210ENST00000513143 ABCA2Q9BZC7 2435 aa10.37□□□□□ -0.75
PDPN-210ENST00000513143 NOTCH2Q04721 2471 aa10.37□□□□□ -0.75
PDPN-210ENST00000513143 CSMD1Q96PZ7 3565 aa10.36□□□□□ -0.75
PDPN-210ENST00000513143 MEIKINA0A087WXM9 373 aa10.36□□□□□ -0.75
PDPN-210ENST00000513143 TRBV23-1A0A0A0MS06 115 aa10.36□□□□□ -0.75
PDPN-210ENST00000513143 ODAMA1E959 279 aa10.36□□□□□ -0.75
PDPN-210ENST00000513143 KIAA1324LA8MWY0 1029 aaPredicted RBP10.36□□□□□ -0.75
PDPN-210ENST00000513143 GABARAPH6UMI1 98 aa10.36□□□□□ -0.75
PDPN-210ENST00000513143 PHF1O43189 567 aaPredicted RBP10.36□□□□□ -0.75
PDPN-210ENST00000513143 ECDO95905 644 aaPredicted RBP10.36□□□□□ -0.75
PDPN-210ENST00000513143 LPLP06858 475 aa10.36□□□□□ -0.75
PDPN-210ENST00000513143 FCGR3AP08637 254 aa10.36□□□□□ -0.75
PDPN-210ENST00000513143 CBX5P45973 191 aa10.36□□□□□ -0.75
PDPN-210ENST00000513143 LOXL1Q08397 574 aaPredicted RBP10.36□□□□□ -0.75
PDPN-210ENST00000513143 ZNF846Q147U1 533 aa10.36□□□□□ -0.75
PDPN-210ENST00000513143 CR1LQ2VPA4 569 aa10.36□□□□□ -0.75
PDPN-210ENST00000513143 PYDC2Q56P42 97 aa10.36□□□□□ -0.75
PDPN-210ENST00000513143 BTN2A1Q7KYR7 527 aa10.36□□□□□ -0.75
PDPN-210ENST00000513143 TRAPPC6BQ86SZ2 158 aa10.36□□□□□ -0.75
PDPN-210ENST00000513143 GDPD1Q8N9F7 314 aa10.36□□□□□ -0.75
PDPN-210ENST00000513143 WFDC11Q8NEX6 87 aa10.36□□□□□ -0.75
PDPN-210ENST00000513143 OR4K15Q8NH41 348 aa10.36□□□□□ -0.75
PDPN-210ENST00000513143 OR52I2Q8NH67 350 aa10.36□□□□□ -0.75
PDPN-210ENST00000513143 C8orf46Q8TAG6 207 aa10.36□□□□□ -0.75
PDPN-210ENST00000513143 SMIM4Q8WVI0 70 aa10.36□□□□□ -0.75
PDPN-210ENST00000513143 FCAMRQ8WWV6 532 aa10.36□□□□□ -0.75
PDPN-210ENST00000513143 H1FXQ92522 213 aaKnown RBP10.36□□□□□ -0.75
PDPN-210ENST00000513143 SDHCQ99643 169 aaPredicted RBP10.36□□□□□ -0.75
PDPN-210ENST00000513143 DCTN5Q9BTE1 182 aa10.36□□□□□ -0.75
PDPN-210ENST00000513143 WDR12Q9GZL7 423 aaKnown RBP10.36□□□□□ -0.75
PDPN-210ENST00000513143 CHMP1AQ9HD42 196 aaPredicted RBP10.36□□□□□ -0.75
PDPN-210ENST00000513143 MBNL3Q9NUK0 354 aaKnown RBP10.36□□□□□ -0.75
PDPN-210ENST00000513143 LPAR3Q9UBY5 353 aa10.36□□□□□ -0.75
PDPN-210ENST00000513143 ANAPC10Q9UM13 185 aa10.36□□□□□ -0.75
PDPN-210ENST00000513143 FAM157AC9JC47 383 aa10.35□□□□□ -0.75
PDPN-210ENST00000513143 RNF223E7ERA6 249 aa10.35□□□□□ -0.75
PDPN-210ENST00000513143 ZFP36P26651 326 aaKnown RBP10.35□□□□□ -0.75
PDPN-210ENST00000513143 CD40LGP29965 261 aa10.35□□□□□ -0.75
PDPN-210ENST00000513143 PPP5CP53041 499 aa10.35□□□□□ -0.75
PDPN-210ENST00000513143 RPL31P62899 125 aaKnown RBP10.35□□□□□ -0.75
PDPN-210ENST00000513143 DGCR2P98153 550 aa10.35□□□□□ -0.75
PDPN-210ENST00000513143 SRSF7Q16629 238 aaKnown RBP eCLIP10.35□□□□□ -0.75
PDPN-210ENST00000513143 CD276Q5ZPR3 534 aa10.35□□□□□ -0.75
PDPN-210ENST00000513143 Q6ZS49 121 aa10.35□□□□□ -0.75
PDPN-210ENST00000513143 TCF23Q7RTU1 214 aa10.35□□□□□ -0.75
PDPN-210ENST00000513143 Q8N402 240 aa10.35□□□□□ -0.75
PDPN-210ENST00000513143 CCDC107Q8WV48 283 aa10.35□□□□□ -0.75
PDPN-210ENST00000513143 CORO2AQ92828 525 aa10.35□□□□□ -0.75
PDPN-210ENST00000513143 C1orf159Q96HA4 380 aa10.35□□□□□ -0.75
PDPN-210ENST00000513143 Q9N2K0 584 aa10.35□□□□□ -0.75
PDPN-210ENST00000513143 C19orf12Q9NSK7 152 aa10.35□□□□□ -0.75
PDPN-210ENST00000513143 OR6C3Q9NZP0 311 aa10.35□□□□□ -0.75
PDPN-210ENST00000513143 MTFP1Q9UDX5 166 aa10.35□□□□□ -0.75
PDPN-210ENST00000513143 TRAPPC2LQ9UL33 140 aa10.35□□□□□ -0.75
PDPN-210ENST00000513143 POLR3KQ9Y2Y1 108 aaPredicted RBP10.35□□□□□ -0.75
PDPN-210ENST00000513143 RBMX2Q9Y388 322 aaKnown RBP10.35□□□□□ -0.75
PDPN-210ENST00000513143 LOC105371242A0A075B767 164 aa10.34□□□□□ -0.75
PDPN-210ENST00000513143 TRAV39A0A0B4J263 110 aa10.34□□□□□ -0.75
PDPN-210ENST00000513143 hADV38S2A0JD32 116 aa10.34□□□□□ -0.75
PDPN-210ENST00000513143 MEIS3P1A6NDR6 274 aa10.34□□□□□ -0.75
PDPN-210ENST00000513143 C22orf46C9J442 243 aa10.34□□□□□ -0.75
PDPN-210ENST00000513143 FOXH1O75593 365 aa10.34□□□□□ -0.75
PDPN-210ENST00000513143 RBBP9O75884 186 aa10.34□□□□□ -0.75
PDPN-210ENST00000513143 CGB3P0DN86 165 aa10.34□□□□□ -0.75
PDPN-210ENST00000513143 CGB7P0DN87 165 aa10.34□□□□□ -0.75
PDPN-210ENST00000513143 NAT1P18440 290 aa10.34□□□□□ -0.75
PDPN-210ENST00000513143 RCC1P18754 421 aaPredicted RBP10.34□□□□□ -0.75
PDPN-210ENST00000513143 SSBP1Q04837 148 aaKnown RBP10.34□□□□□ -0.75
PDPN-210ENST00000513143 RNASE12Q5GAN4 147 aaKnown RBP10.34□□□□□ -0.75
PDPN-210ENST00000513143 TMEM200BQ69YZ2 307 aa10.34□□□□□ -0.75
PDPN-210ENST00000513143 MOB1BQ7L9L4 216 aa10.34□□□□□ -0.75
PDPN-210ENST00000513143 ZNF554Q86TJ5 538 aa10.34□□□□□ -0.75
PDPN-210ENST00000513143 HOGA1Q86XE5 327 aa10.34□□□□□ -0.75
PDPN-210ENST00000513143 GVQW1Q8N7I0 195 aa10.34□□□□□ -0.75
PDPN-210ENST00000513143 ZNF565Q8N9K5 539 aa10.34□□□□□ -0.75
PDPN-210ENST00000513143 LY6G5BQ8NDX9 201 aa10.34□□□□□ -0.75
PDPN-210ENST00000513143 OR13A1Q8NGR1 328 aa10.34□□□□□ -0.75
PDPN-210ENST00000513143 DMRTB1Q96MA1 342 aa10.34□□□□□ -0.75
PDPN-210ENST00000513143 THAP7Q9BT49 309 aaPredicted RBP10.34□□□□□ -0.75
PDPN-210ENST00000513143 ST6GALNAC5Q9BVH7 336 aa10.34□□□□□ -0.75
PDPN-210ENST00000513143 KLK11Q9UBX7 282 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms