RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 RFESDQ8TAC1 157 aa13.28□□□□□ -0.28
DDX41-213ENST00000512027 UBALD1Q8TB05 177 aa13.28□□□□□ -0.28
DDX41-213ENST00000512027 KIRREL1Q96J84 757 aa13.28□□□□□ -0.28
DDX41-213ENST00000512027 BANF2Q9H503 90 aa13.28□□□□□ -0.28
DDX41-213ENST00000512027 ZNF696Q9H7X3 374 aa13.28□□□□□ -0.28
DDX41-213ENST00000512027 OR6C3Q9NZP0 311 aa13.28□□□□□ -0.28
DDX41-213ENST00000512027 MINOS1-NBL1R4GNA1 71 aa13.28□□□□□ -0.28
DDX41-213ENST00000512027 KBTBD11-OT1A0A1B0GTJ5 212 aa13.27□□□□□ -0.29
DDX41-213ENST00000512027 A6NDX4 124 aa13.27□□□□□ -0.29
DDX41-213ENST00000512027 F2RL2O00254 374 aa13.27□□□□□ -0.29
DDX41-213ENST00000512027 IGLV1-47P01700 117 aa13.27□□□□□ -0.29
DDX41-213ENST00000512027 GTF2F2P13984 249 aa13.27□□□□□ -0.29
DDX41-213ENST00000512027 HTR1DP28221 377 aa13.27□□□□□ -0.29
DDX41-213ENST00000512027 MAP2K4P45985 399 aa13.27□□□□□ -0.29
DDX41-213ENST00000512027 RBM39Q14498 530 aaKnown RBP13.27□□□□□ -0.29
DDX41-213ENST00000512027 LIPKQ5VXJ0 399 aa13.27□□□□□ -0.29
DDX41-213ENST00000512027 OR52W1Q6IF63 320 aa13.27□□□□□ -0.29
DDX41-213ENST00000512027 TMEM104Q8NE00 496 aa13.27□□□□□ -0.29
DDX41-213ENST00000512027 OR4C13Q8NGP0 309 aa13.27□□□□□ -0.29
DDX41-213ENST00000512027 CNBD2Q96M20 576 aa13.27□□□□□ -0.29
DDX41-213ENST00000512027 BARHL1Q9BZE3 327 aa13.27□□□□□ -0.29
DDX41-213ENST00000512027 CCDC90BQ9GZT6 254 aa13.27□□□□□ -0.29
DDX41-213ENST00000512027 DUSP21Q9H596 190 aa13.27□□□□□ -0.29
DDX41-213ENST00000512027 IFT22Q9H7X7 185 aa13.27□□□□□ -0.29
DDX41-213ENST00000512027 TPRKBQ9Y3C4 175 aa13.27□□□□□ -0.29
DDX41-213ENST00000512027 RGS10O43665 173 aa13.26□□□□□ -0.29
DDX41-213ENST00000512027 IL1AP01583 271 aa13.26□□□□□ -0.29
DDX41-213ENST00000512027 HSMCR30P0CW71 290 aa13.26□□□□□ -0.29
DDX41-213ENST00000512027 CRHBPP24387 322 aa13.26□□□□□ -0.29
DDX41-213ENST00000512027 MAPK3P27361 379 aaPredicted RBP13.26□□□□□ -0.29
DDX41-213ENST00000512027 CD34P28906 385 aa13.26□□□□□ -0.29
DDX41-213ENST00000512027 HLA-DRB5Q30154 266 aa13.26□□□□□ -0.29
DDX41-213ENST00000512027 RBM48Q5RL73 367 aaKnown RBP13.26□□□□□ -0.29
DDX41-213ENST00000512027 FAM53AQ6NSI3 398 aaPredicted RBP13.26□□□□□ -0.29
DDX41-213ENST00000512027 UNQ9370/PRO34162Q6UXP9 181 aa13.26□□□□□ -0.29
DDX41-213ENST00000512027 NEK7Q8TDX7 302 aa13.26□□□□□ -0.29
DDX41-213ENST00000512027 CCDC107Q8WV48 283 aa13.26□□□□□ -0.29
DDX41-213ENST00000512027 TMEM203Q969S6 136 aa13.26□□□□□ -0.29
DDX41-213ENST00000512027 FAM46BQ96A09 425 aa13.26□□□□□ -0.29
DDX41-213ENST00000512027 VCX3BQ9H321 246 aa13.26□□□□□ -0.29
DDX41-213ENST00000512027 KCNK15Q9H427 330 aa13.26□□□□□ -0.29
DDX41-213ENST00000512027 TCF7L1Q9HCS4 588 aa13.26□□□□□ -0.29
DDX41-213ENST00000512027 IDI2-AS1Q9NZ38 188 aa13.26□□□□□ -0.29
DDX41-213ENST00000512027 DPM3Q9P2X0 92 aa13.26□□□□□ -0.29
DDX41-213ENST00000512027 WNK1Q9H4A3 2382 aa13.25□□□□□ -0.29
DDX41-213ENST00000512027 TOR1AO14656 332 aa13.25□□□□□ -0.29
DDX41-213ENST00000512027 ZNF780AO75290 641 aaPredicted RBP13.25□□□□□ -0.29
DDX41-213ENST00000512027 CRTAPO75718 401 aaPredicted RBP13.25□□□□□ -0.29
DDX41-213ENST00000512027 ATP6V1G2O95670 118 aa13.25□□□□□ -0.29
DDX41-213ENST00000512027 MGMTP16455 207 aa13.25□□□□□ -0.29
DDX41-213ENST00000512027 KCNJ3P48549 501 aa13.25□□□□□ -0.29
DDX41-213ENST00000512027 GNG10P50151 68 aa13.25□□□□□ -0.29
DDX41-213ENST00000512027 EFNB2P52799 333 aa13.25□□□□□ -0.29
DDX41-213ENST00000512027 RPS25P62851 125 aaKnown RBP13.25□□□□□ -0.29
DDX41-213ENST00000512027 MPV17LQ2QL34 196 aa13.25□□□□□ -0.29
DDX41-213ENST00000512027 Q6ZS46 218 aa13.25□□□□□ -0.29
DDX41-213ENST00000512027 CEACAM19Q7Z692 300 aa13.25□□□□□ -0.29
DDX41-213ENST00000512027 LINC00596Q86U02 117 aa13.25□□□□□ -0.29
DDX41-213ENST00000512027 LRRTM1Q86UE6 522 aa13.25□□□□□ -0.29
DDX41-213ENST00000512027 RTN4RL2Q86UN3 420 aa13.25□□□□□ -0.29
DDX41-213ENST00000512027 C11orf44Q8N8P7 122 aa13.25□□□□□ -0.29
DDX41-213ENST00000512027 ZNF565Q8N9K5 539 aa13.25□□□□□ -0.29
DDX41-213ENST00000512027 ZNF596Q8TC21 504 aa13.25□□□□□ -0.29
DDX41-213ENST00000512027 UFD1Q92890 307 aa13.25□□□□□ -0.29
DDX41-213ENST00000512027 SELENOIQ9C0D9 397 aa13.25□□□□□ -0.29
DDX41-213ENST00000512027 NPFFR1Q9GZQ6 430 aa13.25□□□□□ -0.29
DDX41-213ENST00000512027 ZNF702PQ9H963 129 aa13.25□□□□□ -0.29
DDX41-213ENST00000512027 RAB18Q9NP72 206 aa13.25□□□□□ -0.29
DDX41-213ENST00000512027 FBLN5Q9UBX5 448 aa13.25□□□□□ -0.29
DDX41-213ENST00000512027 TET2Q6N021 2002 aaPredicted RBP13.24□□□□□ -0.29
DDX41-213ENST00000512027 A0A087X0M5 115 aa13.24□□□□□ -0.29
DDX41-213ENST00000512027 A0A1B0GX30 115 aa13.24□□□□□ -0.29
DDX41-213ENST00000512027 A0A1W2PPE3 182 aa13.24□□□□□ -0.29
DDX41-213ENST00000512027 TMEM30CPA0ZSE6 113 aa13.24□□□□□ -0.29
DDX41-213ENST00000512027 BUB1B-PAK6H3BSN5 160 aa13.24□□□□□ -0.29
DDX41-213ENST00000512027 SC5DO75845 299 aa13.24□□□□□ -0.29
DDX41-213ENST00000512027 KIR2DS4P43632 304 aa13.24□□□□□ -0.29
DDX41-213ENST00000512027 DYNLT3P51808 116 aa13.24□□□□□ -0.29
DDX41-213ENST00000512027 PAX5Q02548 391 aa13.24□□□□□ -0.29
DDX41-213ENST00000512027 TPTE2P1Q5T6R2 138 aa13.24□□□□□ -0.29
DDX41-213ENST00000512027 OR10K2Q6IF99 312 aa13.24□□□□□ -0.29
DDX41-213ENST00000512027 TREML4Q6UXN2 200 aa13.24□□□□□ -0.29
DDX41-213ENST00000512027 LIAT1Q6ZQX7 453 aa13.24□□□□□ -0.29
DDX41-213ENST00000512027 MS4A15Q8N5U1 240 aa13.24□□□□□ -0.29
DDX41-213ENST00000512027 KLHDC1Q8N7A1 406 aa13.24□□□□□ -0.29
DDX41-213ENST00000512027 NKAIN3Q8N8D7 197 aa13.24□□□□□ -0.29
DDX41-213ENST00000512027 NCOR1P1Q9H4R4 102 aa13.24□□□□□ -0.29
DDX41-213ENST00000512027 RCC2Q9P258 522 aaKnown RBP13.24□□□□□ -0.29
DDX41-213ENST00000512027 LEUTXA8MZ59 168 aa13.23□□□□□ -0.29
DDX41-213ENST00000512027 NPIPB11E5RHQ5 1161 aa13.23□□□□□ -0.29
DDX41-213ENST00000512027 HSPA13P48723 471 aa13.23□□□□□ -0.29
DDX41-213ENST00000512027 GPR50Q13585 617 aa13.23□□□□□ -0.29
DDX41-213ENST00000512027 DIAPH2-AS1Q14236 149 aa13.23□□□□□ -0.29
DDX41-213ENST00000512027 GPR176Q14439 515 aa13.23□□□□□ -0.29
DDX41-213ENST00000512027 TMEM95Q3KNT9 176 aa13.23□□□□□ -0.29
DDX41-213ENST00000512027 SIGIRRQ6IA17 410 aa13.23□□□□□ -0.29
DDX41-213ENST00000512027 RAB12Q6IQ22 244 aa13.23□□□□□ -0.29
DDX41-213ENST00000512027 CDH26Q8IXH8 852 aa13.23□□□□□ -0.29
DDX41-213ENST00000512027 OR9G1Q8NH87 305 aa13.23□□□□□ -0.29
DDX41-213ENST00000512027 OR2T6Q8NHC8 308 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms