RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 GALP22466 123 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 COX7A1P24310 79 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 CFHR2P36980 270 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 RORCP51449 518 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 TMBIM6P55061 237 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 RPS27AP62979 156 aaKnown RBP4.46□□□□□ -1.7
PROM1-211ENST00000511153 KRTAP1-1Q07627 177 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 LOXL1Q08397 574 aaPredicted RBP4.46□□□□□ -1.7
PROM1-211ENST00000511153 TMEM155Q4W5P6 130 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 PLAC9Q5JTB6 97 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 KRBOX4Q5JUW0 171 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 PRAMEF5Q5TYX0 476 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 RUSC1-AS1Q66K80 236 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 CYB5R2Q6BCY4 276 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 CLEC9AQ6UXN8 241 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 ASCL4Q6XD76 172 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 GDPGP1Q6ZNW5 385 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 GDPD3Q7L5L3 318 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 TPRA1Q86W33 373 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 Q8IYB0 196 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 SAXO1Q8IYX7 474 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 CMTM4Q8IZR5 234 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 LINC01356Q8N9X3 169 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 DYNC2LI1Q8TCX1 351 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 MRGPRDQ8TDS7 321 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 NUDCD2Q8WVJ2 157 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 SLC25A46Q96AG3 418 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 RAB39BQ96DA2 213 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 SLC25A38Q96DW6 304 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 COQ2Q96H96 371 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 C18orf12Q96KH6 178 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 COX4I2Q96KJ9 171 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 NEDD4LQ96PU5 975 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 NUDT16L1Q9BRJ7 211 aaKnown RBP4.46□□□□□ -1.7
PROM1-211ENST00000511153 SHARPINQ9H0F6 387 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 SIRT7Q9NRC8 400 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 PLEKHJ1Q9NW61 149 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 ZNRD1Q9P1U0 126 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 ZNF69Q9UC07 566 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 ZNF230Q9UIE0 474 aaPredicted RBP4.46□□□□□ -1.7
PROM1-211ENST00000511153 AK3Q9UIJ7 227 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 KIF25Q9UIL4 384 aa4.46□□□□□ -1.7
PROM1-211ENST00000511153 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.46□□□□□ -1.7
PROM1-211ENST00000511153 PPIAL4CA0A0B4J2A2 164 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 A0A1W2PPE3 182 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 TMEM235A6NFC5 223 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 MCRIP1C9JLW8 97 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 K7N7A8 449 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 ZNF737O75373 536 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 HEXAP06865 529 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 CD3GP09693 182 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 PPIAL4GP0DN37 164 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 ELK1P19419 428 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 NFYBP25208 207 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 GDNFP39905 211 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 BMXP51813 675 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 TMEM50BP56557 158 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 RPL31P62899 125 aaKnown RBP4.45□□□□□ -1.7
PROM1-211ENST00000511153 SRSF2Q01130 221 aaKnown RBP4.45□□□□□ -1.7
PROM1-211ENST00000511153 GPR176Q14439 515 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 ZNF146Q15072 292 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 KCNJ8Q15842 424 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 PLA1AQ53H76 456 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 ANKRD39Q53RE8 183 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 DCAF12L2Q5VW00 463 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 TMEM200BQ69YZ2 307 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 ELP2Q6IA86 826 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 TCF23Q7RTU1 214 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 SNX29P2Q8IUI4 249 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 LAX1Q8IWV1 398 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 ZNF561Q8N587 486 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 OR10V1Q8NGI7 309 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 OR13A1Q8NGR1 328 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 KCNG3Q8TAE7 436 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 SDSLQ96GA7 329 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 MED30Q96HR3 178 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 SNX22Q96L94 193 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 URM1Q9BTM9 101 aaKnown RBP4.45□□□□□ -1.7
PROM1-211ENST00000511153 SUCNR1Q9BXA5 334 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 PECRQ9BY49 303 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 KRTAP9-9Q9BYP9 154 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 KRTAP9-4Q9BYQ2 154 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 KRTAP4-7Q9BYR0 210 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 TNFRSF19Q9NS68 423 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 RHBDL2Q9NX52 303 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 ETAA1Q9NY74 926 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 IL36GQ9NZH8 169 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 RPUSD1Q9UJJ7 312 aaKnown RBP4.45□□□□□ -1.7
PROM1-211ENST00000511153 RAB22AQ9UL26 194 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 TRAPPC2LQ9UL33 140 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 NAV3Q8IVL0 2385 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 FBN3Q75N90 2809 aa4.45□□□□□ -1.7
PROM1-211ENST00000511153 IGHV2-70DA0A0C4DH43 119 aa4.44□□□□□ -1.7
PROM1-211ENST00000511153 MDFIC2A0A1B0GVS7 189 aa4.44□□□□□ -1.7
PROM1-211ENST00000511153 ANKRD34BA5PLL1 514 aa4.44□□□□□ -1.7
PROM1-211ENST00000511153 B4DSR2 109 aa4.44□□□□□ -1.7
PROM1-211ENST00000511153 INAFM1C9JVW0 142 aa4.44□□□□□ -1.7
PROM1-211ENST00000511153 LDLRAD4O15165 306 aa4.44□□□□□ -1.7
PROM1-211ENST00000511153 ZNF780AO75290 641 aaPredicted RBP4.44□□□□□ -1.7
PROM1-211ENST00000511153 PDCD6O75340 191 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms