RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 ING4Q9UNL4 249 aa9.95□□□□□ -0.82
PDPN-208ENST00000509009 DNAH3Q8TD57 4116 aa9.95□□□□□ -0.82
PDPN-208ENST00000509009 TRAV39A0A0B4J263 110 aa9.94□□□□□ -0.82
PDPN-208ENST00000509009 BAG2O95816 211 aa9.94□□□□□ -0.82
PDPN-208ENST00000509009 IL1AP01583 271 aa9.94□□□□□ -0.82
PDPN-208ENST00000509009 CD2P06729 351 aa9.94□□□□□ -0.82
PDPN-208ENST00000509009 KCNJ3P48549 501 aa9.94□□□□□ -0.82
PDPN-208ENST00000509009 DIAPH2-AS1Q14236 149 aa9.94□□□□□ -0.82
PDPN-208ENST00000509009 OR2G6Q5TZ20 316 aa9.94□□□□□ -0.82
PDPN-208ENST00000509009 C10orf99Q6UWK7 81 aa9.94□□□□□ -0.82
PDPN-208ENST00000509009 TMPRSS11AQ6ZMR5 421 aa9.94□□□□□ -0.82
PDPN-208ENST00000509009 SLC16A12Q6ZSM3 486 aa9.94□□□□□ -0.82
PDPN-208ENST00000509009 ZNF555Q8NEP9 628 aa9.94□□□□□ -0.82
PDPN-208ENST00000509009 MRGPRDQ8TDS7 321 aa9.94□□□□□ -0.82
PDPN-208ENST00000509009 MYDGFQ969H8 173 aa9.94□□□□□ -0.82
PDPN-208ENST00000509009 TMEM106AQ96A25 262 aa9.94□□□□□ -0.82
PDPN-208ENST00000509009 RPEQ96AT9 228 aa9.94□□□□□ -0.82
PDPN-208ENST00000509009 PHF21AQ96BD5 680 aa9.94□□□□□ -0.82
PDPN-208ENST00000509009 IFT22Q9H7X7 185 aa9.94□□□□□ -0.82
PDPN-208ENST00000509009 TMEM138Q9NPI0 162 aa9.94□□□□□ -0.82
PDPN-208ENST00000509009 PCDHB16Q9NRJ7 776 aa9.94□□□□□ -0.82
PDPN-208ENST00000509009 NECAP2Q9NVZ3 263 aa9.94□□□□□ -0.82
PDPN-208ENST00000509009 BABAM2Q9NXR7 383 aa9.94□□□□□ -0.82
PDPN-208ENST00000509009 ST3GAL6Q9Y274 331 aa9.94□□□□□ -0.82
PDPN-208ENST00000509009 TSSC4Q9Y5U2 329 aaPredicted RBP9.94□□□□□ -0.82
PDPN-208ENST00000509009 M0QZK8 103 aa9.93□□□□□ -0.82
PDPN-208ENST00000509009 IGLL1P15814 213 aa9.93□□□□□ -0.82
PDPN-208ENST00000509009 GZMHP20718 246 aa9.93□□□□□ -0.82
PDPN-208ENST00000509009 LOXL3P58215 753 aa9.93□□□□□ -0.82
PDPN-208ENST00000509009 MADCAM1Q13477 382 aa9.93□□□□□ -0.82
PDPN-208ENST00000509009 LTC4SQ16873 150 aa9.93□□□□□ -0.82
PDPN-208ENST00000509009 NHLRC3Q5JS37 347 aa9.93□□□□□ -0.82
PDPN-208ENST00000509009 C9orf152Q5JTZ5 239 aa9.93□□□□□ -0.82
PDPN-208ENST00000509009 FOXB2Q5VYV0 432 aa9.93□□□□□ -0.82
PDPN-208ENST00000509009 OSR2Q8N2R0 312 aa9.93□□□□□ -0.82
PDPN-208ENST00000509009 DRAM1Q8N682 238 aa9.93□□□□□ -0.82
PDPN-208ENST00000509009 SUMF2Q8NBJ7 301 aa9.93□□□□□ -0.82
PDPN-208ENST00000509009 OR10A7Q8NGE5 316 aa9.93□□□□□ -0.82
PDPN-208ENST00000509009 TOMM40LQ969M1 308 aa9.93□□□□□ -0.82
PDPN-208ENST00000509009 ORAI1Q96D31 301 aa9.93□□□□□ -0.82
PDPN-208ENST00000509009 RDH12Q96NR8 316 aa9.93□□□□□ -0.82
PDPN-208ENST00000509009 DPCDQ9BVM2 203 aaPredicted RBP9.93□□□□□ -0.82
PDPN-208ENST00000509009 FAM192AQ9GZU8 254 aa9.93□□□□□ -0.82
PDPN-208ENST00000509009 METTL9Q9H1A3 318 aa9.93□□□□□ -0.82
PDPN-208ENST00000509009 SMPD3Q9NY59 655 aaPredicted RBP9.93□□□□□ -0.82
PDPN-208ENST00000509009 IL36GQ9NZH8 169 aa9.93□□□□□ -0.82
PDPN-208ENST00000509009 CLEC2DQ9UHP7 191 aa9.93□□□□□ -0.82
PDPN-208ENST00000509009 ZNF281Q9Y2X9 895 aa9.93□□□□□ -0.82
PDPN-208ENST00000509009 AMMECR1Q9Y4X0 333 aaPredicted RBP9.93□□□□□ -0.82
PDPN-208ENST00000509009 A0A1W2PPI3 338 aa9.92□□□□□ -0.82
PDPN-208ENST00000509009 GEMIN2O14893 280 aaKnown RBP9.92□□□□□ -0.82
PDPN-208ENST00000509009 GPX5O75715 221 aa9.92□□□□□ -0.82
PDPN-208ENST00000509009 CLIC3O95833 236 aa9.92□□□□□ -0.82
PDPN-208ENST00000509009 LALBAP00709 142 aa9.92□□□□□ -0.82
PDPN-208ENST00000509009 SNRNP70P08621 437 aaKnown RBP9.92□□□□□ -0.82
PDPN-208ENST00000509009 CD33P20138 364 aa9.92□□□□□ -0.82
PDPN-208ENST00000509009 ZNF93P35789 620 aaPredicted RBP9.92□□□□□ -0.82
PDPN-208ENST00000509009 HNF4GQ14541 408 aa9.92□□□□□ -0.82
PDPN-208ENST00000509009 OR4X2Q8NGF9 303 aa9.92□□□□□ -0.82
PDPN-208ENST00000509009 OR52N1Q8NH53 320 aa9.92□□□□□ -0.82
PDPN-208ENST00000509009 OR56B4Q8NH76 319 aa9.92□□□□□ -0.82
PDPN-208ENST00000509009 MRAPQ8TCY5 172 aa9.92□□□□□ -0.82
PDPN-208ENST00000509009 GHSRQ92847 366 aa9.92□□□□□ -0.82
PDPN-208ENST00000509009 AURKAIP1Q9NWT8 199 aaPredicted RBP9.92□□□□□ -0.82
PDPN-208ENST00000509009 DIMT1Q9UNQ2 313 aaKnown RBP9.92□□□□□ -0.82
PDPN-208ENST00000509009 TRBV5-5A0A0J9YX44 114 aa9.91□□□□□ -0.82
PDPN-208ENST00000509009 A0A1W2PPE3 182 aa9.91□□□□□ -0.82
PDPN-208ENST00000509009 IRGMA1A4Y4 181 aa9.91□□□□□ -0.82
PDPN-208ENST00000509009 EBAG9O00559 213 aa9.91□□□□□ -0.82
PDPN-208ENST00000509009 PIN1P1O15428 100 aa9.91□□□□□ -0.82
PDPN-208ENST00000509009 OR7C1O76099 320 aaPredicted RBP9.91□□□□□ -0.82
PDPN-208ENST00000509009 CSTBP04080 98 aaKnown RBP9.91□□□□□ -0.82
PDPN-208ENST00000509009 PF4V1P10720 104 aa9.91□□□□□ -0.82
PDPN-208ENST00000509009 IGFBP3P17936 291 aaPredicted RBP9.91□□□□□ -0.82
PDPN-208ENST00000509009 BDKRB2P30411 391 aa9.91□□□□□ -0.82
PDPN-208ENST00000509009 SSTR5P35346 364 aa9.91□□□□□ -0.82
PDPN-208ENST00000509009 GNG10P50151 68 aa9.91□□□□□ -0.82
PDPN-208ENST00000509009 RAB7AP51149 207 aa9.91□□□□□ -0.82
PDPN-208ENST00000509009 RBM11P57052 281 aaKnown RBP9.91□□□□□ -0.82
PDPN-208ENST00000509009 RPS11P62280 158 aaKnown RBP eCLIP9.91□□□□□ -0.82
PDPN-208ENST00000509009 PPP3R1P63098 170 aa9.91□□□□□ -0.82
PDPN-208ENST00000509009 DDI2Q5TDH0 399 aa9.91□□□□□ -0.82
PDPN-208ENST00000509009 OR8H3Q8N146 312 aa9.91□□□□□ -0.82
PDPN-208ENST00000509009 OR13C5Q8NGS8 318 aa9.91□□□□□ -0.82
PDPN-208ENST00000509009 SMIM19Q96E16 107 aa9.91□□□□□ -0.82
PDPN-208ENST00000509009 S100A13Q99584 98 aa9.91□□□□□ -0.82
PDPN-208ENST00000509009 MOB4Q9Y3A3 225 aa9.91□□□□□ -0.82
PDPN-208ENST00000509009 EXOSC1Q9Y3B2 195 aaKnown RBP9.91□□□□□ -0.82
PDPN-208ENST00000509009 HSPE1-MOB4S4R3N1 261 aa9.91□□□□□ -0.82
PDPN-208ENST00000509009 A0A1W2PP11 408 aa9.9□□□□□ -0.82
PDPN-208ENST00000509009 TMEM30CPA0ZSE6 113 aa9.9□□□□□ -0.82
PDPN-208ENST00000509009 C15orf65H3BRN8 121 aa9.9□□□□□ -0.82
PDPN-208ENST00000509009 MT-ND4P03905 459 aa9.9□□□□□ -0.82
PDPN-208ENST00000509009 TMEM11P17152 192 aa9.9□□□□□ -0.82
PDPN-208ENST00000509009 EBI3Q14213 229 aa9.9□□□□□ -0.82
PDPN-208ENST00000509009 HES1Q14469 280 aa9.9□□□□□ -0.82
PDPN-208ENST00000509009 ATAD3CQ5T2N8 411 aa9.9□□□□□ -0.82
PDPN-208ENST00000509009 TTC23Q5W5X9 447 aa9.9□□□□□ -0.82
PDPN-208ENST00000509009 DMKNQ6E0U4 476 aaPredicted RBP9.9□□□□□ -0.82
PDPN-208ENST00000509009 ZNF329Q86UD4 541 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms