RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 CREB3L1Q96BA8 519 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 YIPF6Q96EC8 236 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 COQ2Q96H96 371 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 RIMS4Q9H426 269 aaPredicted RBP7.5□□□□□ -1.21
NUP54-207ENST00000508583 SIRT7Q9NRC8 400 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 ETAA1Q9NY74 926 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 MGAT4AQ9UM21 535 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 SESN1Q9Y6P5 492 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 CUBNO60494 3623 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 KBTBD11-OT1A0A1B0GTJ5 212 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 BTBD17A6NE02 478 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 NPFFO15130 113 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 NOL3O60936 208 aaKnown RBP7.49□□□□□ -1.21
NUP54-207ENST00000508583 IL1AP01583 271 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 FBP1P09467 338 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 SMIM18P0DKX4 95 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 IGHV1-8P0DP01 117 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 IGHV4-38-2P0DP08 117 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 CCL3L1P16619 93 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 BLVRBP30043 206 aaPredicted RBP7.49□□□□□ -1.21
NUP54-207ENST00000508583 GLIPR1P48060 266 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 ARHGDIBP52566 201 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 OR10A3P58181 314 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 UNC119Q13432 240 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 C2orf76Q3KRA6 126 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 NKAPLQ5M9Q1 402 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 RSBN1Q5VWQ0 802 aaPredicted RBP7.49□□□□□ -1.21
NUP54-207ENST00000508583 ZNF497Q6ZNH5 498 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 RTN4RL2Q86UN3 420 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 Q8N7P7 452 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 TPRX1Q8N7U7 411 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 OR10A7Q8NGE5 316 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 ZNF596Q8TC21 504 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 ZFAND2BQ8WV99 257 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 ZDHHC16Q969W1 377 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 PHF21AQ96BD5 680 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 GFI1Q99684 422 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 SLC6A7Q99884 636 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 CENPOQ9BU64 300 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 CLEC7AQ9BXN2 247 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 PLEKHJ1Q9NW61 149 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 ING3Q9NXR8 418 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 KCNIP1Q9NZI2 227 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 ZNF69Q9UC07 566 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 DAPK2Q9UIK4 370 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 SCOCQ9UIL1 159 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 KIF25Q9UIL4 384 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 TRAPPC2LQ9UL33 140 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 HSF4Q9ULV5 492 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 ETV7Q9Y603 341 aa7.49□□□□□ -1.21
NUP54-207ENST00000508583 KIAA2026Q5HYC2 2103 aa7.48□□□□□ -1.21
NUP54-207ENST00000508583 TMEM272A0A1B0GTI8 110 aa7.48□□□□□ -1.21
NUP54-207ENST00000508583 MEIOCA2RUB1 952 aa7.48□□□□□ -1.21
NUP54-207ENST00000508583 RNASEK-C17orf49H0YIS7 233 aa7.48□□□□□ -1.21
NUP54-207ENST00000508583 TRIM77I1YAP6 450 aa7.48□□□□□ -1.21
NUP54-207ENST00000508583 SPINT2O43291 252 aa7.48□□□□□ -1.21
NUP54-207ENST00000508583 CDK2P24941 298 aa7.48□□□□□ -1.21
NUP54-207ENST00000508583 CHATP28329 748 aa7.48□□□□□ -1.21
NUP54-207ENST00000508583 DLX6P56179 175 aa7.48□□□□□ -1.21
NUP54-207ENST00000508583 CLDN12P56749 244 aa7.48□□□□□ -1.21
NUP54-207ENST00000508583 HILS1P60008 231 aa7.48□□□□□ -1.21
NUP54-207ENST00000508583 OR10K2Q6IF99 312 aa7.48□□□□□ -1.21
NUP54-207ENST00000508583 BRD3OSQ6XYD6 125 aa7.48□□□□□ -1.21
NUP54-207ENST00000508583 SLC16A12Q6ZSM3 486 aa7.48□□□□□ -1.21
NUP54-207ENST00000508583 MOB1BQ7L9L4 216 aa7.48□□□□□ -1.21
NUP54-207ENST00000508583 FAM89BQ8N5H3 189 aa7.48□□□□□ -1.21
NUP54-207ENST00000508583 OR11H6Q8NGC7 330 aa7.48□□□□□ -1.21
NUP54-207ENST00000508583 TNFRSF14Q92956 283 aa7.48□□□□□ -1.21
NUP54-207ENST00000508583 BCL7BQ9BQE9 202 aa7.48□□□□□ -1.21
NUP54-207ENST00000508583 FUNDC2Q9BWH2 189 aa7.48□□□□□ -1.21
NUP54-207ENST00000508583 LPAR5Q9H1C0 372 aa7.48□□□□□ -1.21
NUP54-207ENST00000508583 TMEM133Q9H2Q1 129 aa7.48□□□□□ -1.21
NUP54-207ENST00000508583 DPAGT1Q9H3H5 408 aa7.48□□□□□ -1.21
NUP54-207ENST00000508583 CHMP1AQ9HD42 196 aaPredicted RBP7.48□□□□□ -1.21
NUP54-207ENST00000508583 CALYQ9NYX4 217 aa7.48□□□□□ -1.21
NUP54-207ENST00000508583 TBL2Q9Y4P3 447 aaKnown RBP7.48□□□□□ -1.21
NUP54-207ENST00000508583 MXRA5Q9NR99 2828 aa7.48□□□□□ -1.21
NUP54-207ENST00000508583 IGHV3OR16-10A0A075B7F0 116 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 A0A0A6YYH2 397 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 SHISA3A0PJX4 238 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 A6NJ64 397 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 SERPINE3A8MV23 424 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 CLDN34H7C241 214 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 TOR1AO14656 332 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 LDLRAD4O15165 306 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 ORC5O43913 435 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 GABARAPO95166 117 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 MT-ND4P03905 459 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 COX7A1P24310 79 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 SAA4P35542 130 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 CEACAM3P40198 252 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 RPL5P46777 297 aaKnown RBP7.47□□□□□ -1.21
NUP54-207ENST00000508583 VEGFCP49767 419 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 PRRX1P54821 245 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 MXD1Q05195 221 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 DYNC1I2Q13409 638 aaKnown RBP7.47□□□□□ -1.21
NUP54-207ENST00000508583 Q3ZCU0 254 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 IDNKQ5T6J7 187 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 MINOS1Q5TGZ0 78 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 ZNF782Q6ZMW2 699 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms