RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 MOB4Q9Y3A3 225 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 KLK4Q9Y5K2 254 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 NAP1L6A6NFF2 107 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 A6NIN4 97 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 ZNF98A6NK75 572 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 UBE2L6O14933 153 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 SLC2A10O95528 541 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 CA6P23280 308 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 RAE1P78406 368 aaKnown RBP2.57□□□□□ -2
NEDD4-208ENST00000508342 TNK1Q13470 666 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 RNF151Q2KHN1 245 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 FAM106AQ4KMX7 169 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 SLC16A12Q6ZSM3 486 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 VN1R4Q7Z5H5 301 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 DMRTC2Q8IXT2 367 aaPredicted RBP2.57□□□□□ -2
NEDD4-208ENST00000508342 TMEM217Q8N7C4 229 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 LRRC29Q8WV35 223 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 RAB40AQ8WXH6 277 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 NRGNQ92686 78 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 MCHR2Q969V1 340 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 PELI1Q96FA3 418 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 REG4Q9BYZ8 158 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 SMIM3Q9BZL3 60 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 OR2B2Q9GZK3 357 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 ZNF331Q9NQX6 463 aaPredicted RBP2.57□□□□□ -2
NEDD4-208ENST00000508342 A0A1W2PQD3 144 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 A0A1W2PS18 150 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 AGAP14A8MT82 685 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 ZNF724A8MTY0 619 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 TSTD3H0UI37 97 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 CHRM2P08172 466 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 RFPL3SP0C7P2 107 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 PLPPR5Q32ZL2 321 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 SPANXN5Q5MJ07 72 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 TIMM23BQ5SRD1 257 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 TMEM236Q5W0B7 351 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 PRSS35Q8N3Z0 413 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 C11orf42Q8N5U0 333 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 TEAD3Q99594 435 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 ZDHHC11Q9H8X9 412 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 GPR35Q9HC97 309 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 BIN3Q9NQY0 253 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 KCNG2Q9UJ96 466 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 VSIG4Q9Y279 399 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 PPIAL4EA0A075B759 164 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 ZNF705FA8MVS1 300 aaPredicted RBP2.57□□□□□ -2
NEDD4-208ENST00000508342 PPIAL4DF5H284 164 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 K7EPK0 472 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 KRASP01116 189 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 ZNF705DP0CH99 300 aaPredicted RBP2.57□□□□□ -2
NEDD4-208ENST00000508342 ZNF705BP0CI00 300 aaPredicted RBP2.57□□□□□ -2
NEDD4-208ENST00000508342 PPIAL4FP0DN26 164 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 HTR2BP41595 481 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 TPPP2P59282 170 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 ELF3P78545 371 aaPredicted RBP2.57□□□□□ -2
NEDD4-208ENST00000508342 HLXQ14774 488 aaPredicted RBP2.57□□□□□ -2
NEDD4-208ENST00000508342 PCK2Q16822 640 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 RNF212Q495C1 297 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 PHYHD1Q5SRE7 291 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 AMMECR1LQ6DCA0 310 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 TRAT1Q6PIZ9 186 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 DRAM2Q6UX65 266 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 COMMD7Q86VX2 200 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 DTX1Q86Y01 620 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 LGI3Q8N145 548 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 FAM71E2Q8N5Q1 922 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 ZNF525Q8N782 197 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 ARIH2OSQ8N7S6 290 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 OR1S2Q8NGQ3 325 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 OR8U1Q8NH10 309 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 OR1L1Q8NH94 360 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 OR1F12Q8NHA8 337 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 RFESDQ8TAC1 157 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 Q8WTZ3 238 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 SLAMF6Q96DU3 332 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 NEURL3Q96EH8 262 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 GPR78Q96P69 363 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 SF3B5Q9BWJ5 86 aaKnown RBP2.57□□□□□ -2
NEDD4-208ENST00000508342 NXF2Q9GZY0 626 aaKnown RBP2.57□□□□□ -2
NEDD4-208ENST00000508342 PARP11Q9NR21 331 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 CNOT2Q9NZN8 540 aaKnown RBP2.57□□□□□ -2
NEDD4-208ENST00000508342 RNF7Q9UBF6 113 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 SLC25A10Q9UBX3 287 aaPredicted RBP2.57□□□□□ -2
NEDD4-208ENST00000508342 NGFP01138 241 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 IGFBP2P18065 325 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 ARRB2P32121 409 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 PSMB3P49720 205 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 YBX1P67809 324 aaKnown RBP2.57□□□□□ -2
NEDD4-208ENST00000508342 EFNB1P98172 346 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 MMDQ15546 238 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 TNXAQ16473 311 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 GLYATL3Q5SZD4 288 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 RPL22L1Q6P5R6 122 aaKnown RBP2.57□□□□□ -2
NEDD4-208ENST00000508342 GLIPR1L1Q6UWM5 242 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 ACOT7LQ6ZUV0 252 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 SLC16A13Q7RTY0 426 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 TGIF2LYQ8IUE0 185 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 TGIF2LXQ8IUE1 241 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 MDS2Q8NDY4 140 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 ASB10Q8WXI3 467 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms