RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 DIAPH2-AS1Q14236 149 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 RSU1Q15404 277 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 CCDC58Q4VC31 144 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 OR2G6Q5TZ20 316 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 RPL22L1Q6P5R6 122 aaKnown RBP10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 CENPVQ7Z7K6 275 aaPredicted RBP10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 SATL1Q86VE3 508 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 C10orf67Q8IYJ2 551 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 ZNF565Q8N9K5 539 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 OR4X2Q8NGF9 303 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 OR56B4Q8NH76 319 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 MRAPQ8TCY5 172 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 MRGPRDQ8TDS7 321 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 MYDGFQ969H8 173 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 TMEM106AQ96A25 262 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 RPEQ96AT9 228 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 BARHL1Q9BZE3 327 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 PCDHB16Q9NRJ7 776 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 IDI2-AS1Q9NZ38 188 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 IL36GQ9NZH8 169 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 PSG11Q9UQ72 335 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 MOB4Q9Y3A3 225 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 AMMECR1Q9Y4X0 333 aaPredicted RBP10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 TSSC4Q9Y5U2 329 aaPredicted RBP10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 SIRT4Q9Y6E7 314 aaPredicted RBP10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 HSPE1-MOB4S4R3N1 261 aa10.34□□□□□ -0.75
HMGCS1-205ENST00000508319 TCRBV4S1A1TA0A5B7 111 aa10.33□□□□□ -0.76
HMGCS1-205ENST00000508319 CDRT1O95170 752 aa10.33□□□□□ -0.76
HMGCS1-205ENST00000508319 SNRNP70P08621 437 aaKnown RBP10.33□□□□□ -0.76
HMGCS1-205ENST00000508319 IGLL1P15814 213 aa10.33□□□□□ -0.76
HMGCS1-205ENST00000508319 CD33P20138 364 aa10.33□□□□□ -0.76
HMGCS1-205ENST00000508319 C21orf33P30042 268 aaPredicted RBP10.33□□□□□ -0.76
HMGCS1-205ENST00000508319 RBM11P57052 281 aaKnown RBP10.33□□□□□ -0.76
HMGCS1-205ENST00000508319 NHLRC3Q5JS37 347 aa10.33□□□□□ -0.76
HMGCS1-205ENST00000508319 FOXB2Q5VYV0 432 aa10.33□□□□□ -0.76
HMGCS1-205ENST00000508319 OSR2Q8N2R0 312 aa10.33□□□□□ -0.76
HMGCS1-205ENST00000508319 SUMF2Q8NBJ7 301 aa10.33□□□□□ -0.76
HMGCS1-205ENST00000508319 SGCDQ92629 289 aa10.33□□□□□ -0.76
HMGCS1-205ENST00000508319 SMIM19Q96E16 107 aa10.33□□□□□ -0.76
HMGCS1-205ENST00000508319 DPCDQ9BVM2 203 aaPredicted RBP10.33□□□□□ -0.76
HMGCS1-205ENST00000508319 IFT22Q9H7X7 185 aa10.33□□□□□ -0.76
HMGCS1-205ENST00000508319 SMPD3Q9NY59 655 aaPredicted RBP10.33□□□□□ -0.76
HMGCS1-205ENST00000508319 ST3GAL6Q9Y274 331 aa10.33□□□□□ -0.76
HMGCS1-205ENST00000508319 COL7A1Q02388 2944 aa10.33□□□□□ -0.76
HMGCS1-205ENST00000508319 TRAV39A0A0B4J263 110 aa10.32□□□□□ -0.76
HMGCS1-205ENST00000508319 OR7C1O76099 320 aaPredicted RBP10.32□□□□□ -0.76
HMGCS1-205ENST00000508319 HTR3BO95264 441 aa10.32□□□□□ -0.76
HMGCS1-205ENST00000508319 CLIC3O95833 236 aa10.32□□□□□ -0.76
HMGCS1-205ENST00000508319 LALBAP00709 142 aa10.32□□□□□ -0.76
HMGCS1-205ENST00000508319 FAM106CPP0CH98 169 aa10.32□□□□□ -0.76
HMGCS1-205ENST00000508319 DCKP27707 260 aa10.32□□□□□ -0.76
HMGCS1-205ENST00000508319 GNG10P50151 68 aa10.32□□□□□ -0.76
HMGCS1-205ENST00000508319 MADCAM1Q13477 382 aa10.32□□□□□ -0.76
HMGCS1-205ENST00000508319 LTC4SQ16873 150 aa10.32□□□□□ -0.76
HMGCS1-205ENST00000508319 C9orf152Q5JTZ5 239 aa10.32□□□□□ -0.76
HMGCS1-205ENST00000508319 DDI2Q5TDH0 399 aa10.32□□□□□ -0.76
HMGCS1-205ENST00000508319 THNSL2Q86YJ6 484 aa10.32□□□□□ -0.76
HMGCS1-205ENST00000508319 DRAM1Q8N682 238 aa10.32□□□□□ -0.76
HMGCS1-205ENST00000508319 OR10A7Q8NGE5 316 aa10.32□□□□□ -0.76
HMGCS1-205ENST00000508319 OR13C5Q8NGS8 318 aa10.32□□□□□ -0.76
HMGCS1-205ENST00000508319 RFESDQ8TAC1 157 aa10.32□□□□□ -0.76
HMGCS1-205ENST00000508319 ORAI1Q96D31 301 aa10.32□□□□□ -0.76
HMGCS1-205ENST00000508319 RDH12Q96NR8 316 aa10.32□□□□□ -0.76
HMGCS1-205ENST00000508319 TMEM138Q9NPI0 162 aa10.32□□□□□ -0.76
HMGCS1-205ENST00000508319 A0A1W2PP11 408 aa10.31□□□□□ -0.76
HMGCS1-205ENST00000508319 MAGEA13PA6NCF6 341 aa10.31□□□□□ -0.76
HMGCS1-205ENST00000508319 GEMIN2O14893 280 aaKnown RBP10.31□□□□□ -0.76
HMGCS1-205ENST00000508319 OGG1O15527 345 aa10.31□□□□□ -0.76
HMGCS1-205ENST00000508319 PF4P02776 101 aa10.31□□□□□ -0.76
HMGCS1-205ENST00000508319 SERPINA2P20848 420 aa10.31□□□□□ -0.76
HMGCS1-205ENST00000508319 BDKRB2P30411 391 aa10.31□□□□□ -0.76
HMGCS1-205ENST00000508319 ZNF93P35789 620 aaPredicted RBP10.31□□□□□ -0.76
HMGCS1-205ENST00000508319 RAB7AP51149 207 aa10.31□□□□□ -0.76
HMGCS1-205ENST00000508319 LOXL3P58215 753 aa10.31□□□□□ -0.76
HMGCS1-205ENST00000508319 PPP3R1P63098 170 aa10.31□□□□□ -0.76
HMGCS1-205ENST00000508319 SLC35A2P78381 396 aa10.31□□□□□ -0.76
HMGCS1-205ENST00000508319 KHDC1LQ5JSQ8 128 aa10.31□□□□□ -0.76
HMGCS1-205ENST00000508319 TMPRSS11AQ6ZMR5 421 aa10.31□□□□□ -0.76
HMGCS1-205ENST00000508319 C5orf56Q8N8D9 126 aa10.31□□□□□ -0.76
HMGCS1-205ENST00000508319 ZNF555Q8NEP9 628 aa10.31□□□□□ -0.76
HMGCS1-205ENST00000508319 OR10X1Q8NGY0 326 aa10.31□□□□□ -0.76
HMGCS1-205ENST00000508319 OR52N1Q8NH53 320 aa10.31□□□□□ -0.76
HMGCS1-205ENST00000508319 METTL9Q9H1A3 318 aa10.31□□□□□ -0.76
HMGCS1-205ENST00000508319 CLEC2DQ9UHP7 191 aa10.31□□□□□ -0.76
HMGCS1-205ENST00000508319 DIMT1Q9UNQ2 313 aaKnown RBP10.31□□□□□ -0.76
HMGCS1-205ENST00000508319 ZNF281Q9Y2X9 895 aa10.31□□□□□ -0.76
HMGCS1-205ENST00000508319 TRBV5-5A0A0J9YX44 114 aa10.3□□□□□ -0.76
HMGCS1-205ENST00000508319 A0A1W2PPE3 182 aa10.3□□□□□ -0.76
HMGCS1-205ENST00000508319 C15orf65H3BRN8 121 aa10.3□□□□□ -0.76
HMGCS1-205ENST00000508319 HSD17B6O14756 317 aa10.3□□□□□ -0.76
HMGCS1-205ENST00000508319 FGF16O43320 207 aa10.3□□□□□ -0.76
HMGCS1-205ENST00000508319 IGFBP3P17936 291 aaPredicted RBP10.3□□□□□ -0.76
HMGCS1-205ENST00000508319 RIPK1Q13546 671 aa10.3□□□□□ -0.76
HMGCS1-205ENST00000508319 HES1Q14469 280 aa10.3□□□□□ -0.76
HMGCS1-205ENST00000508319 DMKNQ6E0U4 476 aaPredicted RBP10.3□□□□□ -0.76
HMGCS1-205ENST00000508319 ETV3LQ6ZN32 361 aa10.3□□□□□ -0.76
HMGCS1-205ENST00000508319 SLC16A12Q6ZSM3 486 aa10.3□□□□□ -0.76
HMGCS1-205ENST00000508319 LINC00596Q86U02 117 aa10.3□□□□□ -0.76
HMGCS1-205ENST00000508319 OR8H3Q8N146 312 aa10.3□□□□□ -0.76
HMGCS1-205ENST00000508319 ZNF485Q8NCK3 441 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms