RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 DMBX1Q8NFW5 382 aa12.37□□□□□ -0.43
DDX41-208ENST00000507955 TECTBQ96PL2 329 aa12.37□□□□□ -0.43
DDX41-208ENST00000507955 RNF122Q9H9V4 155 aa12.37□□□□□ -0.43
DDX41-208ENST00000507955 RYDENQ9NUL5 291 aaKnown RBP12.37□□□□□ -0.43
DDX41-208ENST00000507955 COA4Q9NYJ1 87 aa12.37□□□□□ -0.43
DDX41-208ENST00000507955 MEMO1Q9Y316 297 aa12.37□□□□□ -0.43
DDX41-208ENST00000507955 BSNQ9UPA5 3926 aa12.37□□□□□ -0.43
DDX41-208ENST00000507955 DIDO1Q9BTC0 2240 aaKnown RBP12.36□□□□□ -0.43
DDX41-208ENST00000507955 ANKRD30BLA7E2S9 258 aa12.36□□□□□ -0.43
DDX41-208ENST00000507955 COLCA2A8K830 154 aa12.36□□□□□ -0.43
DDX41-208ENST00000507955 HEXAP06865 529 aa12.36□□□□□ -0.43
DDX41-208ENST00000507955 COX5BP10606 129 aa12.36□□□□□ -0.43
DDX41-208ENST00000507955 IGHV1-2P23083 117 aa12.36□□□□□ -0.43
DDX41-208ENST00000507955 GLP1RP43220 463 aa12.36□□□□□ -0.43
DDX41-208ENST00000507955 F2RL1P55085 397 aa12.36□□□□□ -0.43
DDX41-208ENST00000507955 ZNF818PQ6ZRF7 136 aa12.36□□□□□ -0.43
DDX41-208ENST00000507955 WDR86Q86TI4 376 aa12.36□□□□□ -0.43
DDX41-208ENST00000507955 PRR18Q8N4B5 295 aa12.36□□□□□ -0.43
DDX41-208ENST00000507955 SLC35G3Q8N808 338 aa12.36□□□□□ -0.43
DDX41-208ENST00000507955 SUMF2Q8NBJ7 301 aa12.36□□□□□ -0.43
DDX41-208ENST00000507955 AKR1E2Q96JD6 320 aa12.36□□□□□ -0.43
DDX41-208ENST00000507955 WFDC1Q9HC57 220 aa12.36□□□□□ -0.43
DDX41-208ENST00000507955 PIEZO2Q9H5I5 2752 aa12.36□□□□□ -0.43
DDX41-208ENST00000507955 HSD17B6O14756 317 aa12.36□□□□□ -0.43
DDX41-208ENST00000507955 ECI1P42126 302 aa12.36□□□□□ -0.43
DDX41-208ENST00000507955 AKIRIN2Q53H80 203 aa12.36□□□□□ -0.43
DDX41-208ENST00000507955 TMEM178AQ8NBL3 297 aa12.36□□□□□ -0.43
DDX41-208ENST00000507955 OR5A2Q8NGI9 324 aa12.36□□□□□ -0.43
DDX41-208ENST00000507955 Q9N2K0 584 aa12.36□□□□□ -0.43
DDX41-208ENST00000507955 PARP11Q9NR21 331 aa12.36□□□□□ -0.43
DDX41-208ENST00000507955 ZDHHC8Q9ULC8 765 aa12.36□□□□□ -0.43
DDX41-208ENST00000507955 ZNF318Q5VUA4 2279 aa12.36□□□□□ -0.43
DDX41-208ENST00000507955 CACNA1DQ01668 2161 aa12.35□□□□□ -0.43
DDX41-208ENST00000507955 TRAV24A0A0B4J272 114 aa12.35□□□□□ -0.43
DDX41-208ENST00000507955 NAPSAO96009 420 aa12.35□□□□□ -0.43
DDX41-208ENST00000507955 FHITP49789 147 aa12.35□□□□□ -0.43
DDX41-208ENST00000507955 LIAT1Q6ZQX7 453 aa12.35□□□□□ -0.43
DDX41-208ENST00000507955 PIP4P1Q86T03 277 aa12.35□□□□□ -0.43
DDX41-208ENST00000507955 GAPTQ8N292 157 aa12.35□□□□□ -0.43
DDX41-208ENST00000507955 Q8NFD4 153 aa12.35□□□□□ -0.43
DDX41-208ENST00000507955 KIRREL1Q96J84 757 aa12.35□□□□□ -0.43
DDX41-208ENST00000507955 C12orf57Q99622 126 aa12.35□□□□□ -0.43
DDX41-208ENST00000507955 ADGRG4Q8IZF6 3080 aa12.35□□□□□ -0.43
DDX41-208ENST00000507955 MED19A0JLT2 244 aaPredicted RBP12.35□□□□□ -0.43
DDX41-208ENST00000507955 CDRT15L2A8MXV6 281 aa12.35□□□□□ -0.43
DDX41-208ENST00000507955 H0YL77 283 aa12.35□□□□□ -0.43
DDX41-208ENST00000507955 AVPI1Q5T686 147 aa12.35□□□□□ -0.43
DDX41-208ENST00000507955 EIF5AL1Q6IS14 154 aaKnown RBP12.35□□□□□ -0.43
DDX41-208ENST00000507955 VWA1Q6PCB0 445 aa12.35□□□□□ -0.43
DDX41-208ENST00000507955 CXorf67Q86X51 503 aaPredicted RBP12.35□□□□□ -0.43
DDX41-208ENST00000507955 LYPD6BQ8NI32 183 aa12.35□□□□□ -0.43
DDX41-208ENST00000507955 IL1F10Q8WWZ1 152 aa12.35□□□□□ -0.43
DDX41-208ENST00000507955 GALNT14Q96FL9 552 aa12.35□□□□□ -0.43
DDX41-208ENST00000507955 USB1Q9BQ65 265 aaKnown RBP12.35□□□□□ -0.43
DDX41-208ENST00000507955 ASCL3Q9NQ33 180 aa12.35□□□□□ -0.43
DDX41-208ENST00000507955 CCL28Q9NRJ3 127 aa12.35□□□□□ -0.43
DDX41-208ENST00000507955 CACFD1Q9UGQ2 172 aa12.35□□□□□ -0.43
DDX41-208ENST00000507955 INTS1Q8N201 2190 aaKnown RBP12.35□□□□□ -0.43
DDX41-208ENST00000507955 MPPED1O15442 326 aa12.34□□□□□ -0.43
DDX41-208ENST00000507955 TFF1P04155 84 aa12.34□□□□□ -0.43
DDX41-208ENST00000507955 GAPDHP04406 335 aaKnown RBP12.34□□□□□ -0.43
DDX41-208ENST00000507955 TBC1D26Q86UD7 250 aa12.34□□□□□ -0.43
DDX41-208ENST00000507955 C18orf12Q96KH6 178 aa12.34□□□□□ -0.43
DDX41-208ENST00000507955 CLCC1Q96S66 551 aa12.34□□□□□ -0.43
DDX41-208ENST00000507955 RSRP1Q9BUV0 290 aa12.34□□□□□ -0.43
DDX41-208ENST00000507955 SCRT1Q9BWW7 348 aa12.34□□□□□ -0.43
DDX41-208ENST00000507955 FAM86C1Q9NVL1 165 aa12.34□□□□□ -0.43
DDX41-208ENST00000507955 FZR1Q9UM11 496 aa12.34□□□□□ -0.43
DDX41-208ENST00000507955 RFNGQ9Y644 331 aa12.34□□□□□ -0.43
DDX41-208ENST00000507955 CADP27708 2225 aa12.34□□□□□ -0.43
DDX41-208ENST00000507955 PTPRZ1P23471 2315 aaPredicted RBP12.34□□□□□ -0.43
DDX41-208ENST00000507955 C3orf85A0A1B0GTC6 90 aa12.34□□□□□ -0.43
DDX41-208ENST00000507955 JTBO76095 146 aa12.34□□□□□ -0.43
DDX41-208ENST00000507955 ZNF44P15621 663 aa12.34□□□□□ -0.43
DDX41-208ENST00000507955 EIF5AP63241 154 aaKnown RBP12.34□□□□□ -0.43
DDX41-208ENST00000507955 NHLH2Q02577 135 aa12.34□□□□□ -0.43
DDX41-208ENST00000507955 FOXF2Q12947 444 aa12.34□□□□□ -0.43
DDX41-208ENST00000507955 PEA15Q15121 130 aa12.34□□□□□ -0.43
DDX41-208ENST00000507955 ALKBH2Q6NS38 261 aa12.34□□□□□ -0.43
DDX41-208ENST00000507955 GP6Q9HCN6 339 aa12.34□□□□□ -0.43
DDX41-208ENST00000507955 KALRNO60229 2985 aa12.34□□□□□ -0.43
DDX41-208ENST00000507955 ICE1Q9Y2F5 2266 aa12.33□□□□□ -0.43
DDX41-208ENST00000507955 NKX2-6A6NCS4 301 aa12.33□□□□□ -0.44
DDX41-208ENST00000507955 CDIPTO14735 213 aa12.33□□□□□ -0.44
DDX41-208ENST00000507955 C1QL1O75973 258 aa12.33□□□□□ -0.44
DDX41-208ENST00000507955 ZNF14P17017 642 aaPredicted RBP12.33□□□□□ -0.44
DDX41-208ENST00000507955 CEBPDP49716 269 aaPredicted RBP12.33□□□□□ -0.44
DDX41-208ENST00000507955 PPT1P50897 306 aa12.33□□□□□ -0.44
DDX41-208ENST00000507955 DVL1P1P54792 670 aaPredicted RBP12.33□□□□□ -0.44
DDX41-208ENST00000507955 HABP2Q14520 560 aaPredicted RBP12.33□□□□□ -0.44
DDX41-208ENST00000507955 DEFB109BQ30KR1 87 aa12.33□□□□□ -0.44
DDX41-208ENST00000507955 FAM58AQ8N1B3 248 aa12.33□□□□□ -0.44
DDX41-208ENST00000507955 MAGT1Q9H0U3 335 aa12.33□□□□□ -0.44
DDX41-208ENST00000507955 ANKRD11Q6UB99 2663 aaPredicted RBP12.33□□□□□ -0.44
DDX41-208ENST00000507955 SIRPB1O00241 398 aa12.33□□□□□ -0.44
DDX41-208ENST00000507955 GALR2O43603 387 aaPredicted RBP12.33□□□□□ -0.44
DDX41-208ENST00000507955 TK1P04183 234 aa12.33□□□□□ -0.44
DDX41-208ENST00000507955 GNG3P63215 75 aa12.33□□□□□ -0.44
DDX41-208ENST00000507955 SMCO1Q147U7 214 aa12.33□□□□□ -0.44
DDX41-208ENST00000507955 MIDNQ504T8 468 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms