RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 MMP23AO75900 390 aa10.65□□□□□ -0.7
TCOF1-209ENST00000506630 UBBP0CG47 229 aa10.65□□□□□ -0.7
TCOF1-209ENST00000506630 OMGP23515 440 aa10.65□□□□□ -0.7
TCOF1-209ENST00000506630 CDK2P24941 298 aa10.65□□□□□ -0.7
TCOF1-209ENST00000506630 HTR2CP28335 458 aa10.65□□□□□ -0.7
TCOF1-209ENST00000506630 IER3P46695 156 aa10.65□□□□□ -0.7
TCOF1-209ENST00000506630 C1orf100Q5SVJ3 147 aa10.65□□□□□ -0.7
TCOF1-209ENST00000506630 ZNF626Q68DY1 528 aa10.65□□□□□ -0.7
TCOF1-209ENST00000506630 OR6M1Q8NGM8 313 aa10.65□□□□□ -0.7
TCOF1-209ENST00000506630 CORO2AQ92828 525 aa10.65□□□□□ -0.7
TCOF1-209ENST00000506630 Q96M66 194 aa10.65□□□□□ -0.7
TCOF1-209ENST00000506630 GFI1Q99684 422 aa10.65□□□□□ -0.7
TCOF1-209ENST00000506630 TMEM133Q9H2Q1 129 aa10.65□□□□□ -0.7
TCOF1-209ENST00000506630 DPAGT1Q9H3H5 408 aa10.65□□□□□ -0.7
TCOF1-209ENST00000506630 SPACA1Q9HBV2 294 aa10.65□□□□□ -0.7
TCOF1-209ENST00000506630 TRRAPQ9Y4A5 3859 aa10.65□□□□□ -0.7
TCOF1-209ENST00000506630 IGHV2-26A0A0B4J1V2 119 aa10.64□□□□□ -0.71
TCOF1-209ENST00000506630 TMEM30CPA0ZSE6 113 aa10.64□□□□□ -0.71
TCOF1-209ENST00000506630 ODF3BA8MYP8 253 aa10.64□□□□□ -0.71
TCOF1-209ENST00000506630 PAX6P26367 422 aa10.64□□□□□ -0.71
TCOF1-209ENST00000506630 P2RY14Q15391 338 aa10.64□□□□□ -0.71
TCOF1-209ENST00000506630 C17orf58Q2M2W7 97 aa10.64□□□□□ -0.71
TCOF1-209ENST00000506630 OR52W1Q6IF63 320 aa10.64□□□□□ -0.71
TCOF1-209ENST00000506630 OR10K2Q6IF99 312 aa10.64□□□□□ -0.71
TCOF1-209ENST00000506630 RAB12Q6IQ22 244 aa10.64□□□□□ -0.71
TCOF1-209ENST00000506630 BAIAP2L2Q6UXY1 529 aa10.64□□□□□ -0.71
TCOF1-209ENST00000506630 LHFPL4Q7Z7J7 247 aa10.64□□□□□ -0.71
TCOF1-209ENST00000506630 ZNF565Q8N9K5 539 aa10.64□□□□□ -0.71
TCOF1-209ENST00000506630 BEND2Q8NDZ0 799 aa10.64□□□□□ -0.71
TCOF1-209ENST00000506630 OR13A1Q8NGR1 328 aa10.64□□□□□ -0.71
TCOF1-209ENST00000506630 MRGPRDQ8TDS7 321 aa10.64□□□□□ -0.71
TCOF1-209ENST00000506630 CLEC7AQ9BXN2 247 aa10.64□□□□□ -0.71
TCOF1-209ENST00000506630 TMEM59Q9BXS4 323 aa10.64□□□□□ -0.71
TCOF1-209ENST00000506630 CALYQ9NYX4 217 aa10.64□□□□□ -0.71
TCOF1-209ENST00000506630 TBL2Q9Y4P3 447 aaKnown RBP10.64□□□□□ -0.71
TCOF1-209ENST00000506630 TRAV39A0A0B4J263 110 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 TRDV1A0A1B0GX56 115 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 FAM90A10PA6NDY2 464 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 FAM90A18PA6NE21 464 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 FAM181BA6NEQ2 426 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 FAM90A16PA6NEW6 464 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 FAM90A20PA6NIJ5 464 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 FAM90A8PA6NJQ4 464 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 FAM90A7PA6NKC0 464 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 FAM90A22PA8MWA6 464 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 FAM90A12PA8MX19 464 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 FAM90A5PA8MXJ8 464 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 FAM90A23PA8MXZ1 464 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 MCRIP1C9JLW8 97 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 H3BUX3 64 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 SLC22A1O15245 554 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 CRYBA1P05813 215 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 FAM90A15PP0C7V4 464 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 FAM90A13PP0C7W8 464 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 FAM90A14PP0C7W9 464 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 FAM90A24PP0C7X0 464 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 VSIG8P0DPA2 414 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 MYL9P24844 172 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 NFYBP25208 207 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 GDNFP39905 211 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 PAX5Q02548 391 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 RBM39Q14498 530 aaKnown RBP10.63□□□□□ -0.71
TCOF1-209ENST00000506630 NEDD8Q15843 81 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 RAB11BQ15907 218 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 LTC4SQ16873 150 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 LRRC75BQ2VPJ9 315 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 KCTD21Q4G0X4 260 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 PLA1AQ53H76 456 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 C22orf42Q6IC83 251 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 SLC35E4Q6ICL7 350 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 HEPN1Q6WQI6 88 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 OR11H6Q8NGC7 330 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 NDNFQ8TB73 568 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 CCDC107Q8WV48 283 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 SSX3Q99909 188 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 NCOR1P1Q9H4R4 102 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 ETAA1Q9NY74 926 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 RCC2Q9P258 522 aaKnown RBP10.63□□□□□ -0.71
TCOF1-209ENST00000506630 PEX16Q9Y5Y5 336 aa10.63□□□□□ -0.71
TCOF1-209ENST00000506630 KBTBD11-OT1A0A1B0GTJ5 212 aa10.62□□□□□ -0.71
TCOF1-209ENST00000506630 A0A1B0GUS0 222 aa10.62□□□□□ -0.71
TCOF1-209ENST00000506630 AIPO00170 330 aa10.62□□□□□ -0.71
TCOF1-209ENST00000506630 SLC17A2O00624 439 aa10.62□□□□□ -0.71
TCOF1-209ENST00000506630 PDCD5O14737 125 aa10.62□□□□□ -0.71
TCOF1-209ENST00000506630 GPR137BO60478 399 aa10.62□□□□□ -0.71
TCOF1-209ENST00000506630 PDCD6O75340 191 aa10.62□□□□□ -0.71
TCOF1-209ENST00000506630 BPNT1O95861 308 aa10.62□□□□□ -0.71
TCOF1-209ENST00000506630 IL1AP01583 271 aa10.62□□□□□ -0.71
TCOF1-209ENST00000506630 ARSBP15848 533 aa10.62□□□□□ -0.71
TCOF1-209ENST00000506630 MDKP21741 143 aaPredicted RBP10.62□□□□□ -0.71
TCOF1-209ENST00000506630 SSTR5P35346 364 aa10.62□□□□□ -0.71
TCOF1-209ENST00000506630 UNC119Q13432 240 aa10.62□□□□□ -0.71
TCOF1-209ENST00000506630 NKAPLQ5M9Q1 402 aa10.62□□□□□ -0.71
TCOF1-209ENST00000506630 CD200R1LQ6Q8B3 271 aa10.62□□□□□ -0.71
TCOF1-209ENST00000506630 RTN4RL2Q86UN3 420 aa10.62□□□□□ -0.71
TCOF1-209ENST00000506630 ABHD12Q8N2K0 398 aa10.62□□□□□ -0.71
TCOF1-209ENST00000506630 OR5R1Q8NH85 324 aa10.62□□□□□ -0.71
TCOF1-209ENST00000506630 KCNG3Q8TAE7 436 aa10.62□□□□□ -0.71
TCOF1-209ENST00000506630 DYRK2Q92630 601 aa10.62□□□□□ -0.71
TCOF1-209ENST00000506630 AJUBAQ96IF1 538 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms