RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 NDUFB11Q9NX14 153 aa20.5■□□□□ 0.87
PVT1-201ENST00000504719 ING3Q9NXR8 418 aa20.5■□□□□ 0.87
PVT1-201ENST00000504719 ZNF581Q9P0T4 197 aa20.5■□□□□ 0.87
PVT1-201ENST00000504719 FBLN5Q9UBX5 448 aa20.5■□□□□ 0.87
PVT1-201ENST00000504719 FUOMA2VDF0 154 aa20.49■□□□□ 0.87
PVT1-201ENST00000504719 MMP23AO75900 390 aa20.49■□□□□ 0.87
PVT1-201ENST00000504719 OR7C1O76099 320 aaPredicted RBP20.49■□□□□ 0.87
PVT1-201ENST00000504719 CSN2P05814 226 aa20.49■□□□□ 0.87
PVT1-201ENST00000504719 CALRP27797 417 aaKnown RBP20.49■□□□□ 0.87
PVT1-201ENST00000504719 GLIPR1P48060 266 aa20.49■□□□□ 0.87
PVT1-201ENST00000504719 DYNC1I2Q13409 638 aaKnown RBP20.49■□□□□ 0.87
PVT1-201ENST00000504719 KCTD21Q4G0X4 260 aa20.49■□□□□ 0.87
PVT1-201ENST00000504719 PAN3Q58A45 887 aaKnown RBP20.49■□□□□ 0.87
PVT1-201ENST00000504719 LIAT1Q6ZQX7 453 aa20.49■□□□□ 0.87
PVT1-201ENST00000504719 TRAPPC6BQ86SZ2 158 aa20.49■□□□□ 0.87
PVT1-201ENST00000504719 CORO2AQ92828 525 aa20.49■□□□□ 0.87
PVT1-201ENST00000504719 TMEM133Q9H2Q1 129 aa20.49■□□□□ 0.87
PVT1-201ENST00000504719 IGHV2-26A0A0B4J1V2 119 aa20.48■□□□□ 0.87
PVT1-201ENST00000504719 CCRL2O00421 344 aa20.48■□□□□ 0.87
PVT1-201ENST00000504719 TIMM23O14925 209 aa20.48■□□□□ 0.87
PVT1-201ENST00000504719 FAM189A2Q15884 450 aa20.48■□□□□ 0.87
PVT1-201ENST00000504719 PLA1AQ53H76 456 aa20.48■□□□□ 0.87
PVT1-201ENST00000504719 KRBOX4Q5JUW0 171 aa20.48■□□□□ 0.87
PVT1-201ENST00000504719 LINC00596Q86U02 117 aa20.48■□□□□ 0.87
PVT1-201ENST00000504719 COQ2Q96H96 371 aa20.48■□□□□ 0.87
PVT1-201ENST00000504719 TRGV10A0A0A0MS01 117 aa20.47■□□□□ 0.87
PVT1-201ENST00000504719 CHST1O43916 411 aa20.47■□□□□ 0.87
PVT1-201ENST00000504719 KIR2DS4P43632 304 aa20.47■□□□□ 0.87
PVT1-201ENST00000504719 SSX2Q16385 188 aa20.47■□□□□ 0.87
PVT1-201ENST00000504719 MINOS1Q5TGZ0 78 aa20.47■□□□□ 0.87
PVT1-201ENST00000504719 TMEM104Q8NE00 496 aa20.47■□□□□ 0.87
PVT1-201ENST00000504719 MRPS24Q96EL2 167 aaKnown RBP20.47■□□□□ 0.87
PVT1-201ENST00000504719 BANF2Q9H503 90 aa20.47■□□□□ 0.87
PVT1-201ENST00000504719 RANBP3Q9H6Z4 567 aaPredicted RBP20.47■□□□□ 0.87
PVT1-201ENST00000504719 IFT22Q9H7X7 185 aa20.47■□□□□ 0.87
PVT1-201ENST00000504719 TAS2R3Q9NYW6 316 aa20.47■□□□□ 0.87
PVT1-201ENST00000504719 MINOS1-NBL1R4GNA1 71 aa20.47■□□□□ 0.87
PVT1-201ENST00000504719 ODAMA1E959 279 aa20.46■□□□□ 0.87
PVT1-201ENST00000504719 CRTAPO75718 401 aaPredicted RBP20.46■□□□□ 0.87
PVT1-201ENST00000504719 RAB13P51153 203 aa20.46■□□□□ 0.87
PVT1-201ENST00000504719 MPV17LQ2QL34 196 aa20.46■□□□□ 0.87
PVT1-201ENST00000504719 C1orf100Q5SVJ3 147 aa20.46■□□□□ 0.87
PVT1-201ENST00000504719 SUMF2Q8NBJ7 301 aa20.46■□□□□ 0.87
PVT1-201ENST00000504719 DPCDQ9BVM2 203 aaPredicted RBP20.46■□□□□ 0.87
PVT1-201ENST00000504719 CLEC7AQ9BXN2 247 aa20.46■□□□□ 0.87
PVT1-201ENST00000504719 GAL3ST2Q9H3Q3 398 aa20.46■□□□□ 0.87
PVT1-201ENST00000504719 GHRLQ9UBU3 117 aa20.46■□□□□ 0.87
PVT1-201ENST00000504719 AK6Q9Y3D8 172 aaKnown RBP20.46■□□□□ 0.87
PVT1-201ENST00000504719 M0QZ24 198 aa20.45■□□□□ 0.86
PVT1-201ENST00000504719 MGMTP16455 207 aa20.45■□□□□ 0.86
PVT1-201ENST00000504719 ATAD3CQ5T2N8 411 aa20.45■□□□□ 0.86
PVT1-201ENST00000504719 CD200R1LQ6Q8B3 271 aa20.45■□□□□ 0.86
PVT1-201ENST00000504719 CCBE1Q6UXH8 406 aaPredicted RBP20.45■□□□□ 0.86
PVT1-201ENST00000504719 HEPN1Q6WQI6 88 aa20.45■□□□□ 0.86
PVT1-201ENST00000504719 OR4C13Q8NGP0 309 aa20.45■□□□□ 0.86
PVT1-201ENST00000504719 FAM46BQ96A09 425 aa20.45■□□□□ 0.86
PVT1-201ENST00000504719 GFI1Q99684 422 aa20.45■□□□□ 0.86
PVT1-201ENST00000504719 SELENOIQ9C0D9 397 aa20.45■□□□□ 0.86
PVT1-201ENST00000504719 ABCB10Q9NRK6 738 aa20.45■□□□□ 0.86
PVT1-201ENST00000504719 TCF19Q9Y242 345 aa20.45■□□□□ 0.86
PVT1-201ENST00000504719 SIGLEC9Q9Y336 463 aa20.45■□□□□ 0.86
PVT1-201ENST00000504719 TRDV1A0A1B0GX56 115 aa20.44■□□□□ 0.86
PVT1-201ENST00000504719 SLC22A1O15245 554 aa20.44■□□□□ 0.86
PVT1-201ENST00000504719 UBBP0CG47 229 aa20.44■□□□□ 0.86
PVT1-201ENST00000504719 CD37P11049 281 aa20.44■□□□□ 0.86
PVT1-201ENST00000504719 HTR2CP28335 458 aa20.44■□□□□ 0.86
PVT1-201ENST00000504719 DYNLT3P51808 116 aa20.44■□□□□ 0.86
PVT1-201ENST00000504719 PRAMEF5Q5TYX0 476 aa20.44■□□□□ 0.86
PVT1-201ENST00000504719 OR52W1Q6IF63 320 aa20.44■□□□□ 0.86
PVT1-201ENST00000504719 BAIAP2L2Q6UXY1 529 aa20.44■□□□□ 0.86
PVT1-201ENST00000504719 PLPPR1Q8TBJ4 325 aa20.44■□□□□ 0.86
PVT1-201ENST00000504719 BARHL1Q9BZE3 327 aa20.44■□□□□ 0.86
PVT1-201ENST00000504719 WNK1Q9H4A3 2382 aa20.43■□□□□ 0.86
PVT1-201ENST00000504719 A6NDX4 124 aa20.43■□□□□ 0.86
PVT1-201ENST00000504719 CDK2P24941 298 aa20.43■□□□□ 0.86
PVT1-201ENST00000504719 KCNJ3P48549 501 aa20.43■□□□□ 0.86
PVT1-201ENST00000504719 EFNB2P52799 333 aa20.43■□□□□ 0.86
PVT1-201ENST00000504719 NEDD8Q15843 81 aa20.43■□□□□ 0.86
PVT1-201ENST00000504719 RTN4RL2Q86UN3 420 aa20.43■□□□□ 0.86
PVT1-201ENST00000504719 ABHD12Q8N2K0 398 aa20.43■□□□□ 0.86
PVT1-201ENST00000504719 OR4P4Q8NGL7 312 aa20.43■□□□□ 0.86
PVT1-201ENST00000504719 OR6M1Q8NGM8 313 aa20.43■□□□□ 0.86
PVT1-201ENST00000504719 NDNFQ8TB73 568 aa20.43■□□□□ 0.86
PVT1-201ENST00000504719 NPFFR1Q9GZQ6 430 aa20.43■□□□□ 0.86
PVT1-201ENST00000504719 CST11Q9H112 138 aa20.43■□□□□ 0.86
PVT1-201ENST00000504719 KIF25Q9UIL4 384 aa20.43■□□□□ 0.86
PVT1-201ENST00000504719 HILPDAQ9Y5L2 63 aa20.43■□□□□ 0.86
PVT1-201ENST00000504719 MEIKINA0A087WXM9 373 aa20.42■□□□□ 0.86
PVT1-201ENST00000504719 TNFAIP8O95379 198 aa20.42■□□□□ 0.86
PVT1-201ENST00000504719 VSIG8P0DPA2 414 aa20.42■□□□□ 0.86
PVT1-201ENST00000504719 GDNFP39905 211 aa20.42■□□□□ 0.86
PVT1-201ENST00000504719 RSBN1Q5VWQ0 802 aaPredicted RBP20.42■□□□□ 0.86
PVT1-201ENST00000504719 C11orf88Q6PI97 169 aa20.42■□□□□ 0.86
PVT1-201ENST00000504719 Q96M66 194 aa20.42■□□□□ 0.86
PVT1-201ENST00000504719 PLGRKTQ9HBL7 147 aa20.42■□□□□ 0.86
PVT1-201ENST00000504719 OR6C3Q9NZP0 311 aa20.42■□□□□ 0.86
PVT1-201ENST00000504719 TET2Q6N021 2002 aaPredicted RBP20.42■□□□□ 0.86
PVT1-201ENST00000504719 MPIG6BO95866 241 aa20.41■□□□□ 0.86
PVT1-201ENST00000504719 JUNBP17275 347 aaPredicted RBP20.41■□□□□ 0.86
PVT1-201ENST00000504719 GALP22466 123 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms