RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 TREML4Q6UXN2 200 aa11.49□□□□□ -0.57
HOXC9-202ENST00000504557 ZNF565Q8N9K5 539 aa11.49□□□□□ -0.57
HOXC9-202ENST00000504557 OR2T6Q8NHC8 308 aa11.49□□□□□ -0.57
HOXC9-202ENST00000504557 ZNF596Q8TC21 504 aa11.49□□□□□ -0.57
HOXC9-202ENST00000504557 TMEM203Q969S6 136 aa11.49□□□□□ -0.57
HOXC9-202ENST00000504557 FAM46BQ96A09 425 aa11.49□□□□□ -0.57
HOXC9-202ENST00000504557 CITED1Q99966 193 aa11.49□□□□□ -0.57
HOXC9-202ENST00000504557 ZNF696Q9H7X3 374 aa11.49□□□□□ -0.57
HOXC9-202ENST00000504557 IL36GQ9NZH8 169 aa11.49□□□□□ -0.57
HOXC9-202ENST00000504557 FOXJ3Q9UPW0 622 aa11.49□□□□□ -0.57
HOXC9-202ENST00000504557 TPRKBQ9Y3C4 175 aa11.49□□□□□ -0.57
HOXC9-202ENST00000504557 MINOS1-NBL1R4GNA1 71 aa11.49□□□□□ -0.57
HOXC9-202ENST00000504557 KBTBD11-OT1A0A1B0GTJ5 212 aa11.48□□□□□ -0.57
HOXC9-202ENST00000504557 A0A1W2PPE3 182 aa11.48□□□□□ -0.57
HOXC9-202ENST00000504557 VGLL3A8MV65 326 aa11.48□□□□□ -0.57
HOXC9-202ENST00000504557 ZNF780AO75290 641 aaPredicted RBP11.48□□□□□ -0.57
HOXC9-202ENST00000504557 GPX5O75715 221 aa11.48□□□□□ -0.57
HOXC9-202ENST00000504557 CRTAPO75718 401 aaPredicted RBP11.48□□□□□ -0.57
HOXC9-202ENST00000504557 MYF6P23409 242 aa11.48□□□□□ -0.57
HOXC9-202ENST00000504557 MAPK3P27361 379 aaPredicted RBP11.48□□□□□ -0.57
HOXC9-202ENST00000504557 PRRX1P54821 245 aa11.48□□□□□ -0.57
HOXC9-202ENST00000504557 LIPKQ5VXJ0 399 aa11.48□□□□□ -0.57
HOXC9-202ENST00000504557 RTN4RL2Q86UN3 420 aa11.48□□□□□ -0.57
HOXC9-202ENST00000504557 KIRREL1Q96J84 757 aa11.48□□□□□ -0.57
HOXC9-202ENST00000504557 SELENOIQ9C0D9 397 aa11.48□□□□□ -0.57
HOXC9-202ENST00000504557 PCDHB16Q9NRJ7 776 aa11.48□□□□□ -0.57
HOXC9-202ENST00000504557 IDI2-AS1Q9NZ38 188 aa11.48□□□□□ -0.57
HOXC9-202ENST00000504557 DPM3Q9P2X0 92 aa11.48□□□□□ -0.57
HOXC9-202ENST00000504557 TMEM30CPA0ZSE6 113 aa11.47□□□□□ -0.57
HOXC9-202ENST00000504557 A6NDX4 124 aa11.47□□□□□ -0.57
HOXC9-202ENST00000504557 M0QZ24 198 aa11.47□□□□□ -0.57
HOXC9-202ENST00000504557 TIMM23O14925 209 aa11.47□□□□□ -0.57
HOXC9-202ENST00000504557 RGS10O43665 173 aa11.47□□□□□ -0.57
HOXC9-202ENST00000504557 MAP2K4P45985 399 aa11.47□□□□□ -0.57
HOXC9-202ENST00000504557 SLC35A2P78381 396 aa11.47□□□□□ -0.57
HOXC9-202ENST00000504557 BDH1Q02338 343 aa11.47□□□□□ -0.57
HOXC9-202ENST00000504557 GPR176Q14439 515 aa11.47□□□□□ -0.57
HOXC9-202ENST00000504557 HLA-DRB5Q30154 266 aa11.47□□□□□ -0.57
HOXC9-202ENST00000504557 CEACAM19Q7Z692 300 aa11.47□□□□□ -0.57
HOXC9-202ENST00000504557 KLHDC1Q8N7A1 406 aa11.47□□□□□ -0.57
HOXC9-202ENST00000504557 Q8NFD4 153 aa11.47□□□□□ -0.57
HOXC9-202ENST00000504557 UFD1Q92890 307 aa11.47□□□□□ -0.57
HOXC9-202ENST00000504557 ANKRD60Q9BZ19 345 aa11.47□□□□□ -0.57
HOXC9-202ENST00000504557 PITPNC1Q9UKF7 332 aa11.47□□□□□ -0.57
HOXC9-202ENST00000504557 LSM2Q9Y333 95 aaKnown RBP11.47□□□□□ -0.57
HOXC9-202ENST00000504557 IGHV3-43A0A0B4J1X8 118 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 UBE2QL1A1L167 161 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 LEUTXA8MZ59 168 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 BUB1B-PAK6H3BSN5 160 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 AIPO00170 330 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 PEX14O75381 377 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 IL1AP01583 271 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 IGHV3-43DP0DP04 118 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 MGMTP16455 207 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 CEACAM3P40198 252 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 GPR50Q13585 617 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 MPV17LQ2QL34 196 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 NHLRC3Q5JS37 347 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 RAB12Q6IQ22 244 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 LIAT1Q6ZQX7 453 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 LINC00596Q86U02 117 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 PRR18Q8N4B5 295 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 NKAIN3Q8N8D7 197 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 TMEM104Q8NE00 496 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 OR4K15Q8NH41 348 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 OR9G1Q8NH87 305 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 CAPSLQ8WWF8 208 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 THRSPQ92748 146 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 CYYR1Q96J86 154 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 KCNK15Q9H427 330 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 ZNF702PQ9H963 129 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 FBLN5Q9UBX5 448 aa11.46□□□□□ -0.57
HOXC9-202ENST00000504557 MGAM2Q2M2H8 2515 aa11.46□□□□□ -0.58
HOXC9-202ENST00000504557 PKD1L1Q8TDX9 2849 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 MEGF11A6BM72 1044 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 MCRIP1C9JLW8 97 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 MPIG6BO95866 241 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 IGLV1-47P01700 117 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 CD1AP06126 327 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 CGB3P0DN86 165 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 CGB7P0DN87 165 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 BRS3P32247 399 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 KIR2DS4P43632 304 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 KCNJ3P48549 501 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 ARHGDIBP52566 201 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 EFNB2P52799 333 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 GP2P55259 537 aaKnown RBP11.45□□□□□ -0.58
HOXC9-202ENST00000504557 RPS25P62851 125 aaKnown RBP11.45□□□□□ -0.58
HOXC9-202ENST00000504557 IRF3Q14653 427 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 TMEM95Q3KNT9 176 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 HSD17B12Q53GQ0 312 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 FBLN7Q53RD9 439 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 NKAPLQ5M9Q1 402 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 TPTE2P1Q5T6R2 138 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 RNLSQ5VYX0 342 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 OR10K2Q6IF99 312 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 FAM53AQ6NSI3 398 aaPredicted RBP11.45□□□□□ -0.58
HOXC9-202ENST00000504557 Q6ZTK2 550 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 LYG1Q8N1E2 194 aa11.45□□□□□ -0.58
HOXC9-202ENST00000504557 MS4A15Q8N5U1 240 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms