RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 PECRQ9BY49 303 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 SMIM3Q9BZL3 60 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 DPY30Q9C005 99 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 SIRPDQ9H106 197 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 GOLGA2P5Q9HBQ8 144 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 AMBNQ9NP70 447 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 SLC52A3Q9NQ40 469 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 PRSS16Q9NQE7 514 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 DCAF13Q9NV06 445 aaKnown RBP5.66□□□□□ -1.5
CLCN3-203ENST00000502998 DLL3Q9NYJ7 618 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 WSB2Q9NYS7 404 aaPredicted RBP5.66□□□□□ -1.5
CLCN3-203ENST00000502998 TESQ9UGI8 421 aaKnown RBP5.66□□□□□ -1.5
CLCN3-203ENST00000502998 PAM16Q9Y3D7 125 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 RPL36Q9Y3U8 105 aaKnown RBP5.66□□□□□ -1.5
CLCN3-203ENST00000502998 HELZ2Q9BYK8 2649 aaKnown RBP5.66□□□□□ -1.5
CLCN3-203ENST00000502998 MAST4O15021 2626 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 TRBV6-7A0A0A0MS04 114 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 TCRBV7S3A2A0A539 114 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 C3orf70A6NLC5 250 aaPredicted RBP5.65□□□□□ -1.5
CLCN3-203ENST00000502998 FABP5P3A8MUU1 101 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 A8MZ25 164 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 TMEM229AB2RXF0 380 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 J3KR12 359 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 M0R2Z0 102 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 SLC16A7O60669 478 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 ALOX12BO75342 701 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 CLEC3AO75596 197 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 DIRAS1O95057 198 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 PMS2P2O95744 297 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 UNGP13051 313 aaPredicted RBP5.65□□□□□ -1.5
CLCN3-203ENST00000502998 EVI2AP22794 236 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 GATA3P23771 443 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 HINT1P49773 126 aaPredicted RBP5.65□□□□□ -1.5
CLCN3-203ENST00000502998 TCL1AP56279 114 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 FAM3BP58499 235 aaPredicted RBP5.65□□□□□ -1.5
CLCN3-203ENST00000502998 TAS2R31P59538 309 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 SNRPGP62308 76 aaKnown RBP5.65□□□□□ -1.5
CLCN3-203ENST00000502998 PSG9Q00887 426 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 COL10A1Q03692 680 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 MFGE8Q08431 387 aaPredicted RBP5.65□□□□□ -1.5
CLCN3-203ENST00000502998 LY6DQ14210 128 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 EDDM3AQ14507 147 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 MRPL23Q16540 153 aaKnown RBP5.65□□□□□ -1.5
CLCN3-203ENST00000502998 SPATA45Q537H7 98 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 C6orf226Q5I0X4 101 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 ANKRD34AQ69YU3 496 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 PWWP2BQ6NUJ5 590 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 MRPL14Q6P1L8 145 aaKnown RBP5.65□□□□□ -1.5
CLCN3-203ENST00000502998 ANKRD16Q6P6B7 361 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 PARM1Q6UWI2 310 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 C12orf54Q6X4T0 127 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 Q6ZSR6 202 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 ZNF429Q86V71 674 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 C17orf64Q86WR6 236 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 ZDHHC23Q8IYP9 409 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 LRRC25Q8N386 305 aaPredicted RBP5.65□□□□□ -1.5
CLCN3-203ENST00000502998 PGBD5Q8N414 524 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 TTC9CQ8N5M4 171 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 DTWD2Q8NBA8 298 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 SUMF2Q8NBJ7 301 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 OR6N2Q8NGY6 317 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 OR4C3Q8NH37 302 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 OR4L1Q8NH43 312 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 TMED6Q8WW62 240 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 FGF13Q92913 245 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 FGF14Q92915 247 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 RTP4Q96DX8 246 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 PCED1BQ96HM7 432 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 NRTNQ99748 197 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 FNDC4Q9H6D8 234 aaPredicted RBP5.65□□□□□ -1.5
CLCN3-203ENST00000502998 REEP1Q9H902 201 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 POPDC3Q9HBV1 291 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 ENY2Q9NPA8 101 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 GPR84Q9NQS5 396 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 ARL15Q9NXU5 204 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 JKAMPQ9P055 326 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 SF3B6Q9Y3B4 125 aaKnown RBP5.65□□□□□ -1.5
CLCN3-203ENST00000502998 R4GN57 208 aa5.65□□□□□ -1.5
CLCN3-203ENST00000502998 DSPP15924 2871 aaKnown RBP5.65□□□□□ -1.5
CLCN3-203ENST00000502998 COL4A3Q01955 1670 aa5.65□□□□□ -1.51
CLCN3-203ENST00000502998 PATJQ8NI35 1801 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 SMG1Q96Q15 3661 aaKnown RBP5.64□□□□□ -1.51
CLCN3-203ENST00000502998 A0A096LPK6 155 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 A0A0G2JLM5 398 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 KIR2DS5A0A0G2JLQ3 304 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 A0A0G2JNG1 304 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 A0A1W2PPV9 198 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 A0A1W2PQF6 199 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 TMEM129A0AVI4 362 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 FAM220BPB1ANY3 271 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 H7C1C5 153 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 K7EP34 96 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 M0R1X1 148 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 SIRPB1O00241 398 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 SAP18O00422 153 aaKnown RBP5.64□□□□□ -1.51
CLCN3-203ENST00000502998 NDUFS4O43181 175 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 HYAL3O43820 417 aaPredicted RBP5.64□□□□□ -1.51
CLCN3-203ENST00000502998 GRB2P62993 217 aaKnown RBP5.64□□□□□ -1.51
CLCN3-203ENST00000502998 KIR2DS5Q14953 304 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 TBR1Q16650 682 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms